Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2761 and Dshi_2762 are separated by 119 nucleotides Dshi_2762 and Dshi_2763 are separated by 67 nucleotides
Dshi_2761: Dshi_2761 - Citrate transporter (RefSeq), at 2,922,178 to 2,923,956
_2761
Dshi_2762: Dshi_2762 - protein of unknown function DUF28 (RefSeq), at 2,924,076 to 2,924,816
_2762
Dshi_2763: Dshi_2763 - Hemolysin-type calcium-binding region (RefSeq), at 2,924,884 to 2,926,548
_2763
Position (kb)
2924
2925 Strain fitness (log2 ratio)
-1
0
1
2 at 2923.172 kb on - strand, within Dshi_2761 at 2923.246 kb on + strand, within Dshi_2761 at 2923.374 kb on - strand, within Dshi_2761 at 2923.422 kb on - strand, within Dshi_2761 at 2923.422 kb on - strand, within Dshi_2761 at 2923.669 kb on - strand, within Dshi_2761 at 2923.710 kb on + strand, within Dshi_2761 at 2923.731 kb on - strand, within Dshi_2761 at 2923.783 kb on - strand at 2923.855 kb on - strand at 2923.872 kb on - strand at 2923.947 kb on - strand at 2923.977 kb on - strand at 2923.996 kb on - strand at 2924.015 kb on - strand at 2924.020 kb on - strand at 2924.025 kb on - strand at 2924.040 kb on - strand at 2924.166 kb on - strand, within Dshi_2762 at 2924.484 kb on + strand, within Dshi_2762 at 2924.629 kb on - strand, within Dshi_2762 at 2924.852 kb on + strand at 2924.888 kb on - strand at 2924.995 kb on - strand at 2925.438 kb on + strand, within Dshi_2763 at 2925.454 kb on - strand, within Dshi_2763 at 2925.530 kb on - strand, within Dshi_2763 at 2925.608 kb on + strand, within Dshi_2763 at 2925.608 kb on + strand, within Dshi_2763 at 2925.650 kb on + strand, within Dshi_2763 at 2925.650 kb on + strand, within Dshi_2763 at 2925.711 kb on + strand, within Dshi_2763 at 2925.810 kb on + strand, within Dshi_2763
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,923,172 - Dshi_2761 0.56 +0.0 2,923,246 + Dshi_2761 0.60 +0.4 2,923,374 - Dshi_2761 0.67 -0.5 2,923,422 - Dshi_2761 0.70 -0.2 2,923,422 - Dshi_2761 0.70 -0.6 2,923,669 - Dshi_2761 0.84 -0.1 2,923,710 + Dshi_2761 0.86 +0.6 2,923,731 - Dshi_2761 0.87 +0.2 2,923,783 - +0.5 2,923,855 - -0.9 2,923,872 - +1.3 2,923,947 - +0.1 2,923,977 - +0.6 2,923,996 - -0.3 2,924,015 - +1.8 2,924,020 - -1.4 2,924,025 - -0.5 2,924,040 - -0.2 2,924,166 - Dshi_2762 0.12 -0.6 2,924,484 + Dshi_2762 0.55 -1.7 2,924,629 - Dshi_2762 0.75 +0.4 2,924,852 + -0.4 2,924,888 - -1.3 2,924,995 - +0.3 2,925,438 + Dshi_2763 0.33 -0.8 2,925,454 - Dshi_2763 0.34 +0.3 2,925,530 - Dshi_2763 0.39 +0.6 2,925,608 + Dshi_2763 0.43 -0.3 2,925,608 + Dshi_2763 0.43 +0.1 2,925,650 + Dshi_2763 0.46 -1.2 2,925,650 + Dshi_2763 0.46 -1.0 2,925,711 + Dshi_2763 0.50 -1.0 2,925,810 + Dshi_2763 0.56 -0.1
Or see this region's nucleotide sequence