Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2644 and Dshi_2645 are separated by 3 nucleotides Dshi_2645 and Dshi_2646 are separated by 31 nucleotides Dshi_2646 and Dshi_2647 are separated by 283 nucleotides
Dshi_2644: Dshi_2644 - export-related chaperone CsaA (RefSeq), at 2,801,317 to 2,801,655
_2644
Dshi_2645: Dshi_2645 - pyrroline-5-carboxylate reductase (RefSeq), at 2,801,659 to 2,802,480
_2645
Dshi_2646: Dshi_2646 - Protein of unknown function DUF1790 (RefSeq), at 2,802,512 to 2,803,042
_2646
Dshi_2647: Dshi_2647 - hypothetical protein (RefSeq), at 2,803,326 to 2,804,246
_2647
Position (kb)
2802
2803
2804 Strain fitness (log2 ratio)
-2
-1
0
1 at 2801.598 kb on - strand, within Dshi_2644 at 2802.529 kb on + strand at 2802.597 kb on + strand, within Dshi_2646 at 2802.597 kb on + strand, within Dshi_2646 at 2802.605 kb on - strand, within Dshi_2646 at 2802.605 kb on - strand, within Dshi_2646 at 2802.657 kb on - strand, within Dshi_2646 at 2802.657 kb on - strand, within Dshi_2646 at 2802.657 kb on - strand, within Dshi_2646 at 2802.738 kb on + strand, within Dshi_2646 at 2802.769 kb on - strand, within Dshi_2646 at 2802.896 kb on - strand, within Dshi_2646 at 2803.038 kb on + strand at 2803.046 kb on - strand at 2803.046 kb on - strand at 2803.080 kb on - strand at 2803.116 kb on - strand at 2803.133 kb on - strand at 2803.218 kb on + strand at 2803.277 kb on - strand at 2803.324 kb on + strand at 2803.332 kb on - strand at 2803.360 kb on - strand at 2803.381 kb on + strand at 2803.431 kb on - strand, within Dshi_2647 at 2803.466 kb on + strand, within Dshi_2647 at 2803.547 kb on + strand, within Dshi_2647 at 2803.853 kb on - strand, within Dshi_2647 at 2803.927 kb on - strand, within Dshi_2647 at 2804.039 kb on - strand, within Dshi_2647
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,801,598 - Dshi_2644 0.83 +0.2 2,802,529 + -0.3 2,802,597 + Dshi_2646 0.16 -0.2 2,802,597 + Dshi_2646 0.16 -0.3 2,802,605 - Dshi_2646 0.18 -1.7 2,802,605 - Dshi_2646 0.18 -1.4 2,802,657 - Dshi_2646 0.27 -2.1 2,802,657 - Dshi_2646 0.27 -0.6 2,802,657 - Dshi_2646 0.27 -0.2 2,802,738 + Dshi_2646 0.43 -1.5 2,802,769 - Dshi_2646 0.48 -0.5 2,802,896 - Dshi_2646 0.72 -0.5 2,803,038 + -0.5 2,803,046 - -1.1 2,803,046 - +0.3 2,803,080 - -0.6 2,803,116 - -0.2 2,803,133 - -0.2 2,803,218 + +0.4 2,803,277 - -0.0 2,803,324 + -0.4 2,803,332 - -2.7 2,803,360 - -0.1 2,803,381 + -0.3 2,803,431 - Dshi_2647 0.11 -0.6 2,803,466 + Dshi_2647 0.15 -0.5 2,803,547 + Dshi_2647 0.24 -1.9 2,803,853 - Dshi_2647 0.57 -0.2 2,803,927 - Dshi_2647 0.65 +0.9 2,804,039 - Dshi_2647 0.77 -0.8
Or see this region's nucleotide sequence