Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2594

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,758,390	-		Dshi_2592	0.71	-0.5
2,758,390	-		Dshi_2592	0.71	-1.5
2,758,423	+		Dshi_2592	0.74	-0.5
2,758,423	+		Dshi_2592	0.74	+1.5
2,758,431	-		Dshi_2592	0.74	-2.2
2,758,431	-		Dshi_2592	0.74	-0.6
2,758,431	-		Dshi_2592	0.74	-0.7
2,758,433	+		Dshi_2592	0.75	-0.7
2,758,452	+		Dshi_2592	0.76	+0.3
2,758,457	+		Dshi_2592	0.76	-0.6
2,758,458	-		Dshi_2592	0.77	-2.5
2,758,458	-		Dshi_2592	0.77	-2.7
2,758,465	-		Dshi_2592	0.77	-0.9
2,758,477	+		Dshi_2592	0.78	+0.6
2,758,487	+		Dshi_2592	0.79	+0.5
2,758,493	-		Dshi_2592	0.79	+0.1
2,758,493	-		Dshi_2592	0.79	+0.7
2,758,512	-		Dshi_2592	0.81	-0.2
2,758,518	-		Dshi_2592	0.82	-0.2
2,758,520	+		Dshi_2592	0.82	+1.5
2,758,528	-		Dshi_2592	0.82	-1.3
2,758,539	+		Dshi_2592	0.83	+0.6
2,758,557	+		Dshi_2592	0.85	-0.2
2,758,557	+		Dshi_2592	0.85	-0.1
2,758,557	+		Dshi_2592	0.85	+1.2
2,758,557	+		Dshi_2592	0.85	-0.1
2,758,557	+		Dshi_2592	0.85	-0.2
2,758,564	+		Dshi_2592	0.85	+0.2
2,758,565	-		Dshi_2592	0.85	+0.5
2,758,565	-		Dshi_2592	0.85	+0.2
2,758,565	-		Dshi_2592	0.85	+0.5
2,758,570	-		Dshi_2592	0.86	+0.1
2,758,571	-		Dshi_2592	0.86	-0.2
2,758,572	-		Dshi_2592	0.86	-1.3
2,758,572	-		Dshi_2592	0.86	-0.3
2,758,574	+		Dshi_2592	0.86	-0.6
2,758,612	+		Dshi_2592	0.89	+0.3
2,758,652	+				+1.2
2,758,652	+				-0.4
2,758,660	-				-0.0
2,758,661	+				-0.8
2,758,663	+				+0.3
2,758,663	+				+1.4
2,758,672	-				-0.8
2,758,700	+				+0.4
2,758,712	+				+0.4
2,758,730	-				-2.0
2,758,731	-				-1.7
2,758,744	-				-0.5
2,758,744	-				-0.6
2,758,766	-				-0.5
2,758,768	+				+0.2
2,758,804	-		Dshi_2593	0.10	-0.3
2,758,814	-		Dshi_2593	0.12	-1.2
2,758,814	-		Dshi_2593	0.12	-2.3
2,758,838	+		Dshi_2593	0.16	-0.1
2,758,855	-		Dshi_2593	0.18	-0.4
2,758,857	+		Dshi_2593	0.19	-1.1
2,758,857	+		Dshi_2593	0.19	+0.1
2,758,865	-		Dshi_2593	0.20	-1.2
2,758,865	-		Dshi_2593	0.20	-0.8
2,758,889	+		Dshi_2593	0.24	-0.3
2,758,909	-		Dshi_2593	0.27	+0.2
2,758,937	+		Dshi_2593	0.31	-0.0
2,758,941	+		Dshi_2593	0.32	-0.0
2,758,946	+		Dshi_2593	0.33	+0.1
2,758,958	-		Dshi_2593	0.35	-0.4
2,759,052	+		Dshi_2593	0.49	-0.0
2,759,145	-		Dshi_2593	0.64	-0.7
2,759,150	-		Dshi_2593	0.65	-1.6
2,759,161	-		Dshi_2593	0.67	+0.7
2,759,165	-		Dshi_2593	0.67	-0.9
2,759,173	-		Dshi_2593	0.68	+0.3
2,759,200	-		Dshi_2593	0.73	-1.8
2,759,221	+		Dshi_2593	0.76	-0.2
2,759,233	-		Dshi_2593	0.78	+1.1
2,759,236	+		Dshi_2593	0.78	-0.4
2,759,261	-		Dshi_2593	0.82	-0.0
2,759,266	-		Dshi_2593	0.83	+1.2
2,759,276	-		Dshi_2593	0.85	-1.5
2,759,304	-		Dshi_2593	0.89	-2.7
2,759,309	-		Dshi_2593	0.90	-0.3
2,759,314	+				-0.2
2,759,322	-				+0.4
2,759,322	-				-1.4
2,759,352	-				-2.3
2,759,354	+				-0.7
2,759,398	-		Dshi_2594	0.10	-1.3
2,759,416	+		Dshi_2594	0.17	+0.3
2,759,416	+		Dshi_2594	0.17	-1.0
2,759,434	+		Dshi_2594	0.23	-1.2
2,759,465	-		Dshi_2594	0.35	-2.0
2,759,465	-		Dshi_2594	0.35	+0.1
2,759,489	-		Dshi_2594	0.44	-2.7
2,759,513	+		Dshi_2594	0.52	-0.4
2,759,538	-		Dshi_2594	0.62	+0.0
2,759,540	+		Dshi_2594	0.62	-0.2
2,759,548	-		Dshi_2594	0.65	-0.8
2,759,559	+		Dshi_2594	0.69	-1.4
2,759,559	+		Dshi_2594	0.69	-1.0
2,759,590	-		Dshi_2594	0.81	-0.3
2,759,591	-		Dshi_2594	0.81	-2.6
2,759,591	-		Dshi_2594	0.81	-1.5
2,759,638	+				-0.6
2,759,644	-				-0.2
2,759,646	-				+0.4
2,759,646	-				-1.7
2,759,659	+				-0.2
2,759,675	-				-0.2
2,759,676	-				+0.3
2,759,719	+				+0.1
2,759,779	-				+0.4
2,759,839	-		Dshi_2595	0.12	+0.1
2,759,846	+		Dshi_2595	0.13	-0.5
2,759,854	-		Dshi_2595	0.13	-0.3
2,759,875	+		Dshi_2595	0.15	+1.2
2,759,900	-		Dshi_2595	0.16	-0.8
2,759,910	+		Dshi_2595	0.17	+0.3
2,759,912	+		Dshi_2595	0.17	-0.2
2,759,914	-		Dshi_2595	0.17	+0.7
2,759,929	+		Dshi_2595	0.18	+0.5
2,760,064	-		Dshi_2595	0.27	+0.6
2,760,074	+		Dshi_2595	0.28	-1.0
2,760,074	+		Dshi_2595	0.28	+0.2
2,760,082	+		Dshi_2595	0.28	+0.1
2,760,082	-		Dshi_2595	0.28	-1.1
2,760,120	-		Dshi_2595	0.31	+0.3
2,760,133	-		Dshi_2595	0.31	-0.7
2,760,169	+		Dshi_2595	0.34	-1.6
2,760,197	+		Dshi_2595	0.36	-0.2
2,760,198	-		Dshi_2595	0.36	+0.3
2,760,222	+		Dshi_2595	0.37	+0.3
2,760,222	+		Dshi_2595	0.37	+0.2
2,760,230	-		Dshi_2595	0.38	+0.2
2,760,230	-		Dshi_2595	0.38	-0.0
2,760,230	-		Dshi_2595	0.38	-0.1
2,760,230	-		Dshi_2595	0.38	-0.9
2,760,259	+		Dshi_2595	0.40	+0.0
2,760,276	-		Dshi_2595	0.41	-0.7
2,760,292	+		Dshi_2595	0.42	+0.3
2,760,299	-		Dshi_2595	0.42	-0.3
2,760,307	+		Dshi_2595	0.43	-1.1
2,760,315	-		Dshi_2595	0.43	+0.1
2,760,316	+		Dshi_2595	0.44	-0.8
2,760,337	+		Dshi_2595	0.45	+0.1
2,760,342	+		Dshi_2595	0.45	-0.4
2,760,402	+		Dshi_2595	0.49	-0.0
2,760,410	-		Dshi_2595	0.50	+0.4
2,760,410	-		Dshi_2595	0.50	-0.8
2,760,426	+		Dshi_2595	0.51	+1.3
2,760,426	+		Dshi_2595	0.51	+0.5
2,760,434	-		Dshi_2595	0.51	-1.0
2,760,515	+		Dshi_2595	0.57	+0.2
2,760,515	+		Dshi_2595	0.57	-0.5
2,760,527	-		Dshi_2595	0.57	-0.1
2,760,537	-		Dshi_2595	0.58	+2.1
2,760,582	+		Dshi_2595	0.61	+0.6
2,760,582	+		Dshi_2595	0.61	+0.2
2,760,582	+		Dshi_2595	0.61	+0.0