Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2371 and Dshi_2372 are separated by 139 nucleotides Dshi_2372 and Dshi_2373 are separated by 230 nucleotides
Dshi_2371: Dshi_2371 - dihydroorotase, homodimeric type (RefSeq), at 2,503,566 to 2,504,603
_2371
Dshi_2372: Dshi_2372 - orotate phosphoribosyltransferase (RefSeq), at 2,504,743 to 2,505,423
_2372
Dshi_2373: Dshi_2373 - replicative DNA helicase (RefSeq), at 2,505,654 to 2,507,174
_2373
Position (kb)
2504
2505
2506 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2503.759 kb on - strand, within Dshi_2371 at 2503.795 kb on - strand, within Dshi_2371 at 2503.859 kb on + strand, within Dshi_2371 at 2503.955 kb on + strand, within Dshi_2371 at 2504.039 kb on - strand, within Dshi_2371 at 2504.056 kb on + strand, within Dshi_2371 at 2504.114 kb on + strand, within Dshi_2371 at 2504.143 kb on + strand, within Dshi_2371 at 2504.213 kb on - strand, within Dshi_2371 at 2504.225 kb on + strand, within Dshi_2371 at 2504.432 kb on - strand, within Dshi_2371 at 2504.509 kb on + strand at 2504.524 kb on - strand at 2504.559 kb on - strand at 2504.693 kb on - strand at 2504.714 kb on - strand at 2504.789 kb on + strand at 2504.797 kb on - strand at 2504.857 kb on + strand, within Dshi_2372 at 2504.870 kb on - strand, within Dshi_2372 at 2504.893 kb on - strand, within Dshi_2372 at 2505.096 kb on + strand, within Dshi_2372 at 2505.104 kb on - strand, within Dshi_2372 at 2505.142 kb on + strand, within Dshi_2372 at 2505.294 kb on + strand, within Dshi_2372 at 2505.302 kb on - strand, within Dshi_2372 at 2505.302 kb on - strand, within Dshi_2372
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,503,759 - Dshi_2371 0.19 +1.0 2,503,795 - Dshi_2371 0.22 -3.9 2,503,859 + Dshi_2371 0.28 -5.4 2,503,955 + Dshi_2371 0.37 -2.6 2,504,039 - Dshi_2371 0.46 -1.5 2,504,056 + Dshi_2371 0.47 -2.1 2,504,114 + Dshi_2371 0.53 -4.4 2,504,143 + Dshi_2371 0.56 -3.0 2,504,213 - Dshi_2371 0.62 -2.3 2,504,225 + Dshi_2371 0.63 -1.2 2,504,432 - Dshi_2371 0.83 -1.9 2,504,509 + -2.8 2,504,524 - -2.6 2,504,559 - -3.9 2,504,693 - +0.1 2,504,714 - -1.9 2,504,789 + -4.1 2,504,797 - -3.4 2,504,857 + Dshi_2372 0.17 -2.3 2,504,870 - Dshi_2372 0.19 -3.4 2,504,893 - Dshi_2372 0.22 -5.6 2,505,096 + Dshi_2372 0.52 -3.2 2,505,104 - Dshi_2372 0.53 -3.0 2,505,142 + Dshi_2372 0.59 -3.7 2,505,294 + Dshi_2372 0.81 -3.6 2,505,302 - Dshi_2372 0.82 -4.0 2,505,302 - Dshi_2372 0.82 -2.1
Or see this region's nucleotide sequence