Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1771 and Dshi_1772 overlap by 4 nucleotides Dshi_1772 and Dshi_1773 are separated by 195 nucleotides Dshi_1773 and Dshi_1774 are separated by 39 nucleotides Dshi_1774 and Dshi_1775 are separated by 67 nucleotides
Dshi_1771: Dshi_1771 - hypothetical protein (RefSeq), at 1,838,034 to 1,839,236
_1771
Dshi_1772: Dshi_1772 - hypothetical protein (RefSeq), at 1,839,233 to 1,839,772
_1772
Dshi_1773: Dshi_1773 - peptidase M48 Ste24p (RefSeq), at 1,839,968 to 1,840,660
_1773
Dshi_1774: Dshi_1774 - hypothetical protein (RefSeq), at 1,840,700 to 1,840,987
_1774
Dshi_1775: Dshi_1775 - (Glutamate--ammonia-ligase) adenylyltransferase (RefSeq), at 1,841,055 to 1,843,865
_1775
Position (kb)
1839
1840
1841 Strain fitness (log2 ratio)
-1
0
1 at 1838.983 kb on - strand, within Dshi_1771 at 1839.336 kb on - strand, within Dshi_1772 at 1839.477 kb on + strand, within Dshi_1772 at 1839.485 kb on - strand, within Dshi_1772 at 1839.485 kb on - strand, within Dshi_1772 at 1839.487 kb on + strand, within Dshi_1772 at 1839.861 kb on + strand at 1840.034 kb on - strand at 1840.263 kb on + strand, within Dshi_1773 at 1840.493 kb on - strand, within Dshi_1773 at 1840.620 kb on + strand at 1840.652 kb on - strand at 1840.718 kb on - strand at 1841.243 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,838,983 - Dshi_1771 0.79 +0.2 1,839,336 - Dshi_1772 0.19 +1.4 1,839,477 + Dshi_1772 0.45 +0.0 1,839,485 - Dshi_1772 0.47 -0.6 1,839,485 - Dshi_1772 0.47 -0.9 1,839,487 + Dshi_1772 0.47 +0.1 1,839,861 + -0.1 1,840,034 - +0.4 1,840,263 + Dshi_1773 0.43 -0.8 1,840,493 - Dshi_1773 0.76 +0.1 1,840,620 + -0.2 1,840,652 - -0.7 1,840,718 - +0.3 1,841,243 - -1.7
Or see this region's nucleotide sequence