Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1461 and Dshi_1462 are separated by 78 nucleotides Dshi_1462 and Dshi_1463 overlap by 4 nucleotides Dshi_1463 and Dshi_1464 are separated by 4 nucleotides Dshi_1464 and Dshi_1465 overlap by 4 nucleotides
Dshi_1461: Dshi_1461 - ribosomal protein L27 (RefSeq), at 1,518,373 to 1,518,642
_1461
Dshi_1462: Dshi_1462 - LysE family transport protein (RefSeq), at 1,518,721 to 1,519,377
_1462
Dshi_1463: Dshi_1463 - GCN5-related N-acetyltransferase (RefSeq), at 1,519,374 to 1,519,913
_1463
Dshi_1464: Dshi_1464 - GCN5-related N-acetyltransferase (RefSeq), at 1,519,918 to 1,520,427
_1464
Dshi_1465: Dshi_1465 - GCN5-related N-acetyltransferase (RefSeq), at 1,520,424 to 1,520,951
_1465
Position (kb)
1519
1520 Strain fitness (log2 ratio)
-1
0
1 at 1518.766 kb on + strand at 1518.873 kb on + strand, within Dshi_1462 at 1519.105 kb on - strand, within Dshi_1462 at 1519.263 kb on + strand, within Dshi_1462 at 1519.324 kb on + strand at 1519.518 kb on + strand, within Dshi_1463 at 1520.030 kb on + strand, within Dshi_1464 at 1520.117 kb on - strand, within Dshi_1464 at 1520.197 kb on + strand, within Dshi_1464 at 1520.205 kb on - strand, within Dshi_1464 at 1520.619 kb on - strand, within Dshi_1465 at 1520.714 kb on - strand, within Dshi_1465 at 1520.718 kb on + strand, within Dshi_1465 at 1520.742 kb on + strand, within Dshi_1465 at 1520.742 kb on + strand, within Dshi_1465 at 1520.750 kb on - strand, within Dshi_1465 at 1520.771 kb on - strand, within Dshi_1465 at 1520.862 kb on + strand at 1520.867 kb on + strand, within Dshi_1465 at 1520.870 kb on - strand, within Dshi_1465 at 1520.875 kb on - strand, within Dshi_1465 at 1520.899 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,518,766 + +0.1 1,518,873 + Dshi_1462 0.23 -0.0 1,519,105 - Dshi_1462 0.58 +0.6 1,519,263 + Dshi_1462 0.82 +0.3 1,519,324 + +0.2 1,519,518 + Dshi_1463 0.27 -0.8 1,520,030 + Dshi_1464 0.22 +0.2 1,520,117 - Dshi_1464 0.39 -0.4 1,520,197 + Dshi_1464 0.55 +1.1 1,520,205 - Dshi_1464 0.56 -0.8 1,520,619 - Dshi_1465 0.37 -0.5 1,520,714 - Dshi_1465 0.55 +0.8 1,520,718 + Dshi_1465 0.56 +0.3 1,520,742 + Dshi_1465 0.60 -0.9 1,520,742 + Dshi_1465 0.60 +0.1 1,520,750 - Dshi_1465 0.62 -0.4 1,520,771 - Dshi_1465 0.66 -0.1 1,520,862 + +1.4 1,520,867 + Dshi_1465 0.84 -0.3 1,520,870 - Dshi_1465 0.84 +0.3 1,520,875 - Dshi_1465 0.85 +0.5 1,520,899 - -0.1
Or see this region's nucleotide sequence