Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0854 and Dshi_0855 are separated by 29 nucleotides Dshi_0855 and Dshi_0856 are separated by 9 nucleotides Dshi_0856 and Dshi_0857 are separated by 8 nucleotides
Dshi_0854: Dshi_0854 - hypothetical protein (RefSeq), at 867,049 to 867,252
_0854
Dshi_0855: Dshi_0855 - transglutaminase domain protein (RefSeq), at 867,282 to 868,169
_0855
Dshi_0856: Dshi_0856 - protein of unknown function DUF404 (RefSeq), at 868,179 to 870,593
_0856
Dshi_0857: Dshi_0857 - transglutaminase domain protein (RefSeq), at 870,602 to 873,940
_0857
Position (kb) 868
869
870
871 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 867.209 kb on + strand, within Dshi_0854 at 867.250 kb on - strand at 867.322 kb on + strand at 867.350 kb on - strand at 867.455 kb on + strand, within Dshi_0855 at 867.715 kb on - strand, within Dshi_0855 at 868.311 kb on + strand at 868.366 kb on + strand at 868.563 kb on + strand, within Dshi_0856 at 868.932 kb on - strand, within Dshi_0856 at 869.010 kb on - strand, within Dshi_0856 at 869.091 kb on - strand, within Dshi_0856 at 869.166 kb on + strand, within Dshi_0856 at 869.199 kb on - strand, within Dshi_0856 at 869.319 kb on - strand, within Dshi_0856 at 869.371 kb on + strand, within Dshi_0856 at 869.415 kb on - strand, within Dshi_0856 at 869.429 kb on + strand, within Dshi_0856 at 869.476 kb on - strand, within Dshi_0856 at 869.525 kb on + strand, within Dshi_0856 at 869.533 kb on - strand, within Dshi_0856 at 869.538 kb on - strand, within Dshi_0856 at 869.648 kb on + strand, within Dshi_0856 at 869.835 kb on - strand, within Dshi_0856 at 869.874 kb on - strand, within Dshi_0856 at 869.877 kb on + strand, within Dshi_0856 at 869.877 kb on + strand, within Dshi_0856 at 870.051 kb on + strand, within Dshi_0856 at 870.285 kb on - strand, within Dshi_0856 at 870.382 kb on - strand at 870.397 kb on - strand at 870.449 kb on - strand at 870.532 kb on - strand at 870.597 kb on - strand at 870.625 kb on + strand at 871.289 kb on + strand, within Dshi_0857
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 867,209 + Dshi_0854 0.78 -0.0 867,250 - +1.2 867,322 + -0.9 867,350 - -1.2 867,455 + Dshi_0855 0.19 -0.6 867,715 - Dshi_0855 0.49 -0.9 868,311 + -2.5 868,366 + -0.1 868,563 + Dshi_0856 0.16 -0.7 868,932 - Dshi_0856 0.31 -0.4 869,010 - Dshi_0856 0.34 +0.2 869,091 - Dshi_0856 0.38 -0.8 869,166 + Dshi_0856 0.41 -0.6 869,199 - Dshi_0856 0.42 -0.5 869,319 - Dshi_0856 0.47 -1.5 869,371 + Dshi_0856 0.49 -1.8 869,415 - Dshi_0856 0.51 -0.5 869,429 + Dshi_0856 0.52 -3.6 869,476 - Dshi_0856 0.54 -1.0 869,525 + Dshi_0856 0.56 -2.1 869,533 - Dshi_0856 0.56 -1.1 869,538 - Dshi_0856 0.56 +0.3 869,648 + Dshi_0856 0.61 -0.7 869,835 - Dshi_0856 0.69 -0.6 869,874 - Dshi_0856 0.70 +0.4 869,877 + Dshi_0856 0.70 -3.7 869,877 + Dshi_0856 0.70 -0.5 870,051 + Dshi_0856 0.78 -0.3 870,285 - Dshi_0856 0.87 -1.4 870,382 - -0.6 870,397 - -0.1 870,449 - -0.1 870,532 - +0.8 870,597 - -0.3 870,625 + -0.6 871,289 + Dshi_0857 0.21 -0.2
Or see this region's nucleotide sequence