Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0595 and Dshi_0596 are separated by 248 nucleotides Dshi_0596 and Dshi_0597 are separated by 183 nucleotides
Dshi_0595: Dshi_0595 - cell shape determining protein, MreB/Mrl family (RefSeq), at 585,804 to 586,841
_0595
Dshi_0596: Dshi_0596 - 2-isopropylmalate synthase (RefSeq), at 587,090 to 588,667
_0596
Dshi_0597: Dshi_0597 - hypothetical protein (RefSeq), at 588,851 to 589,648
_0597
Position (kb) 587
588
589 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 587.037 kb on + strand at 587.178 kb on + strand at 587.191 kb on - strand at 587.197 kb on + strand at 587.412 kb on + strand, within Dshi_0596 at 587.677 kb on - strand, within Dshi_0596 at 588.430 kb on + strand, within Dshi_0596 at 588.574 kb on + strand at 588.607 kb on - strand at 588.686 kb on + strand at 588.730 kb on - strand at 588.749 kb on + strand at 588.757 kb on - strand at 588.848 kb on + strand at 588.902 kb on - strand at 588.919 kb on + strand at 589.008 kb on + strand, within Dshi_0597 at 589.047 kb on - strand, within Dshi_0597 at 589.176 kb on - strand, within Dshi_0597 at 589.184 kb on - strand, within Dshi_0597 at 589.188 kb on - strand, within Dshi_0597 at 589.231 kb on - strand, within Dshi_0597 at 589.233 kb on + strand, within Dshi_0597 at 589.239 kb on + strand, within Dshi_0597 at 589.247 kb on + strand, within Dshi_0597 at 589.257 kb on + strand, within Dshi_0597 at 589.285 kb on + strand, within Dshi_0597 at 589.285 kb on + strand, within Dshi_0597 at 589.293 kb on - strand, within Dshi_0597 at 589.302 kb on - strand, within Dshi_0597 at 589.310 kb on - strand, within Dshi_0597 at 589.372 kb on + strand, within Dshi_0597 at 589.420 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.430 kb on + strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.438 kb on - strand, within Dshi_0597 at 589.456 kb on + strand, within Dshi_0597 at 589.496 kb on - strand, within Dshi_0597 at 589.535 kb on + strand, within Dshi_0597 at 589.543 kb on - strand, within Dshi_0597 at 589.565 kb on + strand, within Dshi_0597 at 589.590 kb on - strand at 589.595 kb on + strand at 589.602 kb on + strand at 589.602 kb on + strand at 589.610 kb on - strand at 589.610 kb on - strand at 589.629 kb on + strand at 589.637 kb on - strand at 589.639 kb on - strand at 589.651 kb on - strand at 589.658 kb on - strand at 589.658 kb on - strand at 589.658 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 587,037 + +0.7 587,178 + -0.5 587,191 - +0.3 587,197 + -2.1 587,412 + Dshi_0596 0.20 -3.2 587,677 - Dshi_0596 0.37 -1.9 588,430 + Dshi_0596 0.85 -1.2 588,574 + -1.4 588,607 - -2.8 588,686 + +1.0 588,730 - +1.2 588,749 + +0.4 588,757 - -0.3 588,848 + -1.9 588,902 - +0.0 588,919 + +0.0 589,008 + Dshi_0597 0.20 +0.5 589,047 - Dshi_0597 0.25 +1.0 589,176 - Dshi_0597 0.41 +1.4 589,184 - Dshi_0597 0.42 +1.0 589,188 - Dshi_0597 0.42 -0.2 589,231 - Dshi_0597 0.48 +0.5 589,233 + Dshi_0597 0.48 -0.2 589,239 + Dshi_0597 0.49 +0.5 589,247 + Dshi_0597 0.50 +0.1 589,257 + Dshi_0597 0.51 +1.0 589,285 + Dshi_0597 0.54 -1.4 589,285 + Dshi_0597 0.54 +0.8 589,293 - Dshi_0597 0.55 +0.4 589,302 - Dshi_0597 0.57 +0.9 589,310 - Dshi_0597 0.58 +0.5 589,372 + Dshi_0597 0.65 -0.7 589,420 + Dshi_0597 0.71 +0.6 589,430 + Dshi_0597 0.73 +0.1 589,430 + Dshi_0597 0.73 -0.2 589,430 + Dshi_0597 0.73 +0.1 589,430 + Dshi_0597 0.73 +0.1 589,430 + Dshi_0597 0.73 +0.3 589,430 + Dshi_0597 0.73 -0.0 589,430 + Dshi_0597 0.73 -0.4 589,430 + Dshi_0597 0.73 -0.0 589,430 + Dshi_0597 0.73 +0.0 589,438 - Dshi_0597 0.74 -0.7 589,438 - Dshi_0597 0.74 -0.1 589,438 - Dshi_0597 0.74 +1.5 589,438 - Dshi_0597 0.74 -0.1 589,456 + Dshi_0597 0.76 +0.1 589,496 - Dshi_0597 0.81 +0.1 589,535 + Dshi_0597 0.86 -2.7 589,543 - Dshi_0597 0.87 -0.0 589,565 + Dshi_0597 0.89 -0.1 589,590 - +1.2 589,595 + +1.1 589,602 + +0.5 589,602 + +0.3 589,610 - +0.4 589,610 - +0.5 589,629 + +0.6 589,637 - -1.3 589,639 - +1.4 589,651 - +0.5 589,658 - -0.4 589,658 - -0.6 589,658 - +0.2
Or see this region's nucleotide sequence