Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0336 and Dshi_0337 are separated by 941 nucleotides Dshi_0337 and Dshi_0338 are separated by 381 nucleotides
Dshi_0336: Dshi_0336 - SNARE associated Golgi protein (RefSeq), at 323,755 to 324,486
_0336
Dshi_0337: Dshi_0337 - ATPase MipZ (RefSeq), at 325,428 to 326,237
_0337
Dshi_0338: Dshi_0338 - beta-lactamase domain protein (RefSeq), at 326,619 to 327,452
_0338
Position (kb)
325
326
327 Strain fitness (log2 ratio)
-2
-1
0
1 at 324.443 kb on + strand at 324.448 kb on + strand at 324.546 kb on + strand at 324.546 kb on + strand at 324.554 kb on - strand at 324.554 kb on - strand at 324.573 kb on - strand at 324.634 kb on + strand at 324.732 kb on + strand at 324.753 kb on + strand at 324.870 kb on + strand at 324.925 kb on - strand at 324.981 kb on - strand at 325.180 kb on + strand at 325.507 kb on - strand at 325.547 kb on - strand, within Dshi_0337 at 325.674 kb on - strand, within Dshi_0337 at 325.795 kb on - strand, within Dshi_0337 at 325.983 kb on - strand, within Dshi_0337 at 326.288 kb on + strand at 326.288 kb on + strand at 326.288 kb on + strand at 326.288 kb on + strand at 326.288 kb on + strand at 326.296 kb on - strand at 326.296 kb on - strand at 326.339 kb on + strand at 326.340 kb on + strand at 326.342 kb on - strand at 326.342 kb on - strand at 326.358 kb on - strand at 326.432 kb on + strand at 326.467 kb on + strand at 326.499 kb on - strand at 326.514 kb on - strand at 326.740 kb on + strand, within Dshi_0338 at 326.910 kb on + strand, within Dshi_0338 at 326.995 kb on - strand, within Dshi_0338 at 327.073 kb on - strand, within Dshi_0338 at 327.118 kb on - strand, within Dshi_0338
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 324,443 + -1.1 324,448 + -0.3 324,546 + +0.2 324,546 + -0.4 324,554 - +0.8 324,554 - -0.9 324,573 - -0.1 324,634 + +0.6 324,732 + +0.6 324,753 + -1.0 324,870 + -0.1 324,925 - +0.4 324,981 - -0.5 325,180 + -1.2 325,507 - +0.1 325,547 - Dshi_0337 0.15 -0.9 325,674 - Dshi_0337 0.30 -2.3 325,795 - Dshi_0337 0.45 -2.1 325,983 - Dshi_0337 0.69 -0.1 326,288 + -0.2 326,288 + +0.6 326,288 + -0.0 326,288 + +0.4 326,288 + -0.8 326,296 - +0.6 326,296 - -1.2 326,339 + -0.1 326,340 + -0.7 326,342 - +0.5 326,342 - -0.1 326,358 - -0.1 326,432 + -0.3 326,467 + +0.2 326,499 - +0.4 326,514 - -1.0 326,740 + Dshi_0338 0.15 +0.7 326,910 + Dshi_0338 0.35 -0.1 326,995 - Dshi_0338 0.45 -0.5 327,073 - Dshi_0338 0.54 -0.8 327,118 - Dshi_0338 0.60 +0.4
Or see this region's nucleotide sequence