Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0036 and Dshi_0037 are separated by 340 nucleotides Dshi_0037 and Dshi_0038 are separated by 215 nucleotides
Dshi_0036: Dshi_0036 - exodeoxyribonuclease III Xth (RefSeq), at 38,563 to 39,351
_0036
Dshi_0037: Dshi_0037 - LPXTG-motif cell wall anchor domain (RefSeq), at 39,692 to 40,216
_0037
Dshi_0038: Dshi_0038 - two component transcriptional regulator, winged helix family (RefSeq), at 40,432 to 41,118
_0038
Position (kb)
39
40
41 Strain fitness (log2 ratio)
-1
0
1 at 38.794 kb on - strand, within Dshi_0036 at 38.846 kb on + strand, within Dshi_0036 at 39.021 kb on - strand, within Dshi_0036 at 39.083 kb on + strand, within Dshi_0036 at 39.128 kb on - strand, within Dshi_0036 at 39.162 kb on - strand, within Dshi_0036 at 39.176 kb on - strand, within Dshi_0036 at 39.295 kb on - strand at 39.317 kb on + strand at 39.325 kb on - strand at 39.341 kb on + strand at 39.371 kb on - strand at 39.410 kb on + strand at 39.424 kb on - strand at 39.482 kb on + strand at 39.520 kb on - strand at 39.520 kb on - strand at 39.525 kb on - strand at 39.528 kb on + strand at 39.637 kb on - strand at 39.642 kb on - strand at 39.644 kb on - strand at 39.649 kb on + strand at 39.669 kb on + strand at 39.669 kb on + strand at 39.692 kb on - strand at 39.694 kb on + strand at 39.706 kb on + strand at 39.786 kb on - strand, within Dshi_0037 at 39.930 kb on + strand, within Dshi_0037 at 40.212 kb on + strand at 40.212 kb on + strand at 40.327 kb on + strand at 40.370 kb on + strand at 40.713 kb on + strand, within Dshi_0038 at 40.948 kb on + strand, within Dshi_0038 at 41.122 kb on + strand at 41.124 kb on + strand at 41.172 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 38,794 - Dshi_0036 0.29 +0.2 38,846 + Dshi_0036 0.36 -1.3 39,021 - Dshi_0036 0.58 -0.0 39,083 + Dshi_0036 0.66 -0.0 39,128 - Dshi_0036 0.72 +0.8 39,162 - Dshi_0036 0.76 +1.3 39,176 - Dshi_0036 0.78 -0.3 39,295 - +0.0 39,317 + +0.2 39,325 - +0.1 39,341 + -0.9 39,371 - +0.3 39,410 + -0.4 39,424 - -0.1 39,482 + -0.1 39,520 - -0.3 39,520 - +0.2 39,525 - +0.1 39,528 + +0.4 39,637 - +0.6 39,642 - -0.5 39,644 - +0.2 39,649 + -1.5 39,669 + -0.0 39,669 + +0.7 39,692 - -0.3 39,694 + +0.9 39,706 + -0.4 39,786 - Dshi_0037 0.18 -0.4 39,930 + Dshi_0037 0.45 -1.7 40,212 + -1.1 40,212 + -0.2 40,327 + +1.1 40,370 + -0.8 40,713 + Dshi_0038 0.41 -1.0 40,948 + Dshi_0038 0.75 -0.9 41,122 + +0.3 41,124 + +0.5 41,172 + +0.6
Or see this region's nucleotide sequence