Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0714 and SO0715 are separated by 1 nucleotides
SO0714: SO0714 - monoheme cytochrome c (NCBI ptt file), at 731,442 to 731,744
SO0714
SO0715: SO0715 - oxidoreductase, molybdopterin-binding (NCBI ptt file), at 731,746 to 732,972
SO0715
Position (kb) 731
732 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 730.470 kb on - strand at 730.474 kb on + strand at 730.482 kb on - strand at 730.488 kb on + strand at 730.516 kb on + strand at 730.524 kb on - strand at 730.524 kb on - strand at 730.651 kb on + strand at 730.652 kb on + strand at 730.840 kb on - strand at 730.939 kb on - strand at 731.025 kb on + strand at 731.063 kb on - strand at 731.105 kb on - strand at 731.113 kb on + strand at 731.207 kb on + strand at 731.208 kb on + strand at 731.553 kb on - strand, within SO0714 at 731.559 kb on + strand, within SO0714 at 731.559 kb on + strand, within SO0714 at 731.625 kb on + strand, within SO0714 at 731.640 kb on - strand, within SO0714 at 731.641 kb on - strand, within SO0714 at 731.681 kb on + strand, within SO0714 at 731.689 kb on - strand, within SO0714 at 731.689 kb on - strand, within SO0714 at 731.789 kb on + strand at 731.843 kb on - strand at 731.847 kb on + strand at 731.847 kb on + strand at 731.847 kb on + strand at 731.855 kb on - strand at 731.880 kb on + strand, within SO0715 at 731.922 kb on - strand, within SO0715 at 731.932 kb on - strand, within SO0715 at 731.952 kb on + strand, within SO0715 at 731.959 kb on - strand, within SO0715 at 731.960 kb on - strand, within SO0715 at 732.104 kb on + strand, within SO0715 at 732.138 kb on + strand, within SO0715 at 732.139 kb on - strand, within SO0715 at 732.139 kb on - strand, within SO0715 at 732.232 kb on - strand, within SO0715 at 732.239 kb on - strand, within SO0715 at 732.239 kb on - strand, within SO0715 at 732.308 kb on + strand, within SO0715 at 732.353 kb on + strand, within SO0715 at 732.363 kb on - strand, within SO0715 at 732.419 kb on + strand, within SO0715 at 732.419 kb on + strand, within SO0715 at 732.434 kb on + strand, within SO0715 at 732.442 kb on - strand, within SO0715 at 732.517 kb on + strand, within SO0715 at 732.525 kb on - strand, within SO0715 at 732.664 kb on + strand, within SO0715 at 732.685 kb on - strand, within SO0715 at 732.691 kb on - strand, within SO0715 at 732.705 kb on - strand, within SO0715
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 730,470 - -1.4 730,474 + -1.7 730,482 - -2.8 730,488 + -1.7 730,516 + -1.5 730,524 - -0.6 730,524 - -0.8 730,651 + +0.8 730,652 + +1.3 730,840 - +0.1 730,939 - -0.4 731,025 + -0.5 731,063 - -0.7 731,105 - -1.9 731,113 + +1.7 731,207 + +0.6 731,208 + -1.9 731,553 - SO0714 0.37 +0.6 731,559 + SO0714 0.39 -0.7 731,559 + SO0714 0.39 -0.3 731,625 + SO0714 0.60 -1.0 731,640 - SO0714 0.65 +0.3 731,641 - SO0714 0.66 -0.5 731,681 + SO0714 0.79 -0.7 731,689 - SO0714 0.82 +0.1 731,689 - SO0714 0.82 -2.1 731,789 + +0.5 731,843 - +0.2 731,847 + -0.3 731,847 + +0.5 731,847 + +0.1 731,855 - +0.2 731,880 + SO0715 0.11 +1.7 731,922 - SO0715 0.14 -1.4 731,932 - SO0715 0.15 +1.3 731,952 + SO0715 0.17 +2.4 731,959 - SO0715 0.17 +0.9 731,960 - SO0715 0.17 -3.0 732,104 + SO0715 0.29 +1.6 732,138 + SO0715 0.32 +0.9 732,139 - SO0715 0.32 +0.5 732,139 - SO0715 0.32 -1.1 732,232 - SO0715 0.40 -1.6 732,239 - SO0715 0.40 +0.9 732,239 - SO0715 0.40 +0.9 732,308 + SO0715 0.46 -1.2 732,353 + SO0715 0.49 -3.2 732,363 - SO0715 0.50 +0.3 732,419 + SO0715 0.55 -1.3 732,419 + SO0715 0.55 -3.1 732,434 + SO0715 0.56 +0.1 732,442 - SO0715 0.57 -1.7 732,517 + SO0715 0.63 +0.5 732,525 - SO0715 0.63 +0.2 732,664 + SO0715 0.75 +0.6 732,685 - SO0715 0.77 -2.2 732,691 - SO0715 0.77 -3.0 732,705 - SO0715 0.78 +0.5
Or see this region's nucleotide sequence