Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0181 and SO0182 are separated by 111 nucleotides SO0182 and SO0183 overlap by 4 nucleotides SO0183 and SO0184 are separated by 85 nucleotides SO0184 and SO0185 are separated by 39 nucleotides SO0185 and SO0186 are separated by 28 nucleotides
SO0181: SO0181 - hypothetical protein (NCBI ptt file), at 186,395 to 187,441
SO0181
SO0182: SO0182 - hypothetical protein (NCBI ptt file), at 187,553 to 187,840
SO0182
SO0183: SO0183 - acetyltransferase, GNAT family (NCBI ptt file), at 187,837 to 188,319
SO0183
SO0184: SO0184 - hypothetical microcystin dependent protein (NCBI ptt file), at 188,405 to 188,956
SO0184
SO0185: SO0185 - hypothetical microcystin dependent protein (NCBI ptt file), at 188,996 to 189,526
SO0185
SO0186: SO0186 - hypothetical microcystin dependent protein (NCBI ptt file), at 189,555 to 190,100
SO0186
Position (kb) 188
189 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 187.407 kb on - strand at 187.623 kb on - strand, within SO0182 at 187.658 kb on - strand, within SO0182 at 187.662 kb on + strand, within SO0182 at 187.672 kb on - strand, within SO0182 at 187.673 kb on + strand, within SO0182 at 187.689 kb on + strand, within SO0182 at 187.689 kb on + strand, within SO0182 at 187.689 kb on + strand, within SO0182 at 187.697 kb on + strand, within SO0182 at 187.697 kb on - strand, within SO0182 at 187.697 kb on - strand, within SO0182 at 187.699 kb on + strand, within SO0182 at 187.699 kb on + strand, within SO0182 at 187.707 kb on - strand, within SO0182 at 187.707 kb on - strand, within SO0182 at 187.707 kb on - strand, within SO0182 at 187.730 kb on + strand, within SO0182 at 187.730 kb on + strand, within SO0182 at 187.730 kb on + strand, within SO0182 at 187.738 kb on - strand, within SO0182 at 187.738 kb on - strand, within SO0182 at 187.756 kb on + strand, within SO0182 at 187.760 kb on + strand, within SO0182 at 187.835 kb on + strand at 187.835 kb on + strand at 187.835 kb on + strand at 187.835 kb on + strand at 187.858 kb on - strand at 187.860 kb on + strand at 187.860 kb on + strand at 187.860 kb on + strand at 187.867 kb on - strand at 187.867 kb on - strand at 187.867 kb on - strand at 187.867 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.868 kb on - strand at 187.917 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.922 kb on + strand, within SO0183 at 187.924 kb on + strand, within SO0183 at 187.927 kb on + strand, within SO0183 at 187.927 kb on + strand, within SO0183 at 187.927 kb on + strand, within SO0183 at 187.927 kb on + strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.930 kb on - strand, within SO0183 at 187.932 kb on - strand at 187.935 kb on - strand, within SO0183 at 187.935 kb on - strand, within SO0183 at 187.935 kb on - strand, within SO0183 at 187.935 kb on - strand, within SO0183 at 187.935 kb on - strand, within SO0183 at 188.027 kb on + strand, within SO0183 at 188.038 kb on + strand, within SO0183 at 188.046 kb on - strand, within SO0183 at 188.046 kb on - strand, within SO0183 at 188.046 kb on - strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.129 kb on + strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.137 kb on - strand, within SO0183 at 188.138 kb on + strand, within SO0183 at 188.139 kb on - strand, within SO0183 at 188.139 kb on - strand, within SO0183 at 188.142 kb on - strand, within SO0183 at 188.142 kb on - strand, within SO0183 at 188.142 kb on - strand, within SO0183 at 188.144 kb on - strand, within SO0183 at 188.147 kb on - strand, within SO0183 at 188.151 kb on + strand, within SO0183 at 188.157 kb on - strand, within SO0183 at 188.160 kb on - strand, within SO0183 at 188.203 kb on + strand, within SO0183 at 188.234 kb on + strand, within SO0183 at 188.242 kb on - strand, within SO0183 at 188.243 kb on + strand, within SO0183 at 188.265 kb on + strand, within SO0183 at 188.290 kb on + strand at 188.315 kb on + strand at 188.323 kb on - strand at 188.323 kb on - strand at 188.323 kb on - strand at 188.329 kb on - strand at 188.331 kb on + strand at 188.388 kb on + strand at 188.388 kb on + strand at 188.388 kb on + strand at 188.396 kb on - strand at 188.442 kb on - strand at 188.442 kb on - strand at 188.453 kb on + strand at 188.453 kb on + strand at 188.453 kb on + strand at 188.459 kb on + strand at 188.461 kb on - strand, within SO0184 at 188.478 kb on - strand, within SO0184 at 188.525 kb on + strand, within SO0184 at 188.528 kb on + strand, within SO0184 at 188.533 kb on + strand, within SO0184 at 188.541 kb on - strand, within SO0184 at 188.564 kb on - strand, within SO0184 at 188.701 kb on + strand, within SO0184 at 188.701 kb on - strand, within SO0184 at 188.737 kb on + strand, within SO0184 at 188.744 kb on - strand, within SO0184 at 188.744 kb on - strand, within SO0184 at 188.745 kb on - strand, within SO0184 at 188.746 kb on - strand, within SO0184 at 188.766 kb on + strand, within SO0184 at 188.771 kb on + strand, within SO0184 at 188.779 kb on - strand, within SO0184 at 188.813 kb on - strand, within SO0184 at 188.815 kb on + strand, within SO0184 at 188.815 kb on + strand, within SO0184 at 188.823 kb on - strand, within SO0184 at 188.823 kb on - strand, within SO0184 at 188.828 kb on + strand, within SO0184 at 188.933 kb on + strand at 188.933 kb on + strand at 188.934 kb on + strand at 188.979 kb on + strand at 189.047 kb on + strand at 189.055 kb on - strand, within SO0185 at 189.064 kb on + strand, within SO0185 at 189.148 kb on - strand, within SO0185 at 189.150 kb on + strand, within SO0185 at 189.194 kb on + strand, within SO0185 at 189.196 kb on - strand, within SO0185 at 189.197 kb on - strand, within SO0185 at 189.206 kb on + strand, within SO0185 at 189.209 kb on - strand, within SO0185 at 189.350 kb on + strand, within SO0185 at 189.378 kb on - strand, within SO0185 at 189.378 kb on - strand, within SO0185 at 189.390 kb on + strand, within SO0185 at 189.390 kb on + strand, within SO0185 at 189.390 kb on + strand, within SO0185 at 189.398 kb on - strand, within SO0185 at 189.398 kb on - strand, within SO0185 at 189.398 kb on - strand, within SO0185 at 189.398 kb on - strand, within SO0185 at 189.446 kb on - strand, within SO0185 at 189.536 kb on + strand at 189.559 kb on - strand at 189.606 kb on + strand at 189.606 kb on - strand at 189.707 kb on - strand, within SO0186 at 189.709 kb on + strand, within SO0186 at 189.709 kb on + strand, within SO0186 at 189.743 kb on + strand, within SO0186 at 189.760 kb on + strand, within SO0186 at 189.774 kb on - strand, within SO0186 at 189.791 kb on + strand, within SO0186 at 189.791 kb on + strand, within SO0186 at 189.791 kb on + strand, within SO0186 at 189.791 kb on + strand, within SO0186 at 189.791 kb on + strand, within SO0186 at 189.791 kb on + strand, within SO0186 at 189.799 kb on - strand, within SO0186 at 189.799 kb on - strand, within SO0186 at 189.799 kb on - strand, within SO0186 at 189.799 kb on - strand, within SO0186 at 189.844 kb on + strand, within SO0186 at 189.846 kb on + strand, within SO0186 at 189.852 kb on - strand, within SO0186 at 189.852 kb on - strand, within SO0186 at 189.852 kb on - strand, within SO0186 at 189.929 kb on - strand, within SO0186
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 187,407 - -0.2 187,623 - SO0182 0.24 +1.9 187,658 - SO0182 0.36 -0.1 187,662 + SO0182 0.38 +1.1 187,672 - SO0182 0.41 +1.7 187,673 + SO0182 0.42 +1.2 187,689 + SO0182 0.47 +0.7 187,689 + SO0182 0.47 +2.9 187,689 + SO0182 0.47 +1.4 187,697 + SO0182 0.50 -0.1 187,697 - SO0182 0.50 +2.6 187,697 - SO0182 0.50 -0.9 187,699 + SO0182 0.51 +1.0 187,699 + SO0182 0.51 +0.5 187,707 - SO0182 0.53 -0.2 187,707 - SO0182 0.53 -1.5 187,707 - SO0182 0.53 +0.3 187,730 + SO0182 0.61 +2.2 187,730 + SO0182 0.61 +0.0 187,730 + SO0182 0.61 +2.2 187,738 - SO0182 0.64 +0.1 187,738 - SO0182 0.64 -1.2 187,756 + SO0182 0.70 -1.0 187,760 + SO0182 0.72 -0.2 187,835 + +0.5 187,835 + -1.0 187,835 + -0.3 187,835 + +0.5 187,858 - +0.4 187,860 + +2.0 187,860 + -2.4 187,860 + -0.4 187,867 - -0.7 187,867 - -1.1 187,867 - +0.0 187,867 - +1.2 187,868 - +0.9 187,868 - +0.3 187,868 - -0.7 187,868 - +2.7 187,868 - +1.1 187,868 - -1.9 187,868 - +1.6 187,868 - -1.5 187,868 - +0.9 187,917 + SO0183 0.17 +0.4 187,922 + SO0183 0.18 -0.6 187,922 + SO0183 0.18 -3.0 187,922 + SO0183 0.18 +0.9 187,922 + SO0183 0.18 +1.4 187,922 + SO0183 0.18 +0.8 187,922 + SO0183 0.18 +2.4 187,922 + SO0183 0.18 +0.8 187,922 + SO0183 0.18 -2.1 187,922 + SO0183 0.18 -1.9 187,922 + SO0183 0.18 -0.9 187,924 + SO0183 0.18 +1.0 187,927 + SO0183 0.19 -3.4 187,927 + SO0183 0.19 -0.7 187,927 + SO0183 0.19 -2.3 187,927 + SO0183 0.19 +1.3 187,930 - SO0183 0.19 -0.5 187,930 - SO0183 0.19 -1.4 187,930 - SO0183 0.19 -1.1 187,930 - SO0183 0.19 +0.8 187,930 - SO0183 0.19 -2.7 187,930 - SO0183 0.19 -2.4 187,930 - SO0183 0.19 -1.7 187,930 - SO0183 0.19 -0.7 187,930 - SO0183 0.19 -1.0 187,932 - +1.3 187,935 - SO0183 0.20 -2.9 187,935 - SO0183 0.20 -0.4 187,935 - SO0183 0.20 -0.6 187,935 - SO0183 0.20 +0.1 187,935 - SO0183 0.20 +0.0 188,027 + SO0183 0.39 +0.7 188,038 + SO0183 0.42 -2.2 188,046 - SO0183 0.43 +1.9 188,046 - SO0183 0.43 +1.4 188,046 - SO0183 0.43 -0.6 188,129 + SO0183 0.60 +1.3 188,129 + SO0183 0.60 -1.7 188,129 + SO0183 0.60 +3.1 188,129 + SO0183 0.60 -1.7 188,129 + SO0183 0.60 +0.6 188,129 + SO0183 0.60 -0.3 188,129 + SO0183 0.60 +0.4 188,129 + SO0183 0.60 +0.5 188,129 + SO0183 0.60 +0.5 188,129 + SO0183 0.60 -1.3 188,129 + SO0183 0.60 -0.4 188,129 + SO0183 0.60 -0.2 188,129 + SO0183 0.60 -0.2 188,129 + SO0183 0.60 -1.7 188,129 + SO0183 0.60 -0.0 188,129 + SO0183 0.60 +0.1 188,129 + SO0183 0.60 -0.2 188,129 + SO0183 0.60 +1.3 188,129 + SO0183 0.60 -2.1 188,137 - SO0183 0.62 -1.0 188,137 - SO0183 0.62 +0.3 188,137 - SO0183 0.62 -0.0 188,137 - SO0183 0.62 +1.1 188,137 - SO0183 0.62 +0.2 188,137 - SO0183 0.62 +1.6 188,137 - SO0183 0.62 -0.9 188,137 - SO0183 0.62 -0.1 188,137 - SO0183 0.62 -0.9 188,137 - SO0183 0.62 +0.1 188,138 + SO0183 0.62 +0.0 188,139 - SO0183 0.63 -2.1 188,139 - SO0183 0.63 +0.1 188,142 - SO0183 0.63 -0.1 188,142 - SO0183 0.63 -1.7 188,142 - SO0183 0.63 -1.1 188,144 - SO0183 0.64 -1.7 188,147 - SO0183 0.64 +1.4 188,151 + SO0183 0.65 -1.9 188,157 - SO0183 0.66 +1.5 188,160 - SO0183 0.67 +0.6 188,203 + SO0183 0.76 +0.3 188,234 + SO0183 0.82 -0.4 188,242 - SO0183 0.84 +0.6 188,243 + SO0183 0.84 -1.2 188,265 + SO0183 0.89 +0.4 188,290 + -0.8 188,315 + +0.5 188,323 - +0.3 188,323 - +1.4 188,323 - +0.7 188,329 - +0.1 188,331 + -0.3 188,388 + +0.4 188,388 + +0.1 188,388 + +1.1 188,396 - +0.8 188,442 - +0.8 188,442 - -0.7 188,453 + -2.1 188,453 + -1.0 188,453 + +2.2 188,459 + -1.1 188,461 - SO0184 0.10 +3.5 188,478 - SO0184 0.13 +0.3 188,525 + SO0184 0.22 -1.3 188,528 + SO0184 0.22 -2.4 188,533 + SO0184 0.23 +0.9 188,541 - SO0184 0.25 -2.4 188,564 - SO0184 0.29 -0.6 188,701 + SO0184 0.54 +0.7 188,701 - SO0184 0.54 -2.6 188,737 + SO0184 0.60 -1.7 188,744 - SO0184 0.61 -1.5 188,744 - SO0184 0.61 -1.8 188,745 - SO0184 0.62 -0.3 188,746 - SO0184 0.62 -0.7 188,766 + SO0184 0.65 -0.4 188,771 + SO0184 0.66 -1.9 188,779 - SO0184 0.68 -3.0 188,813 - SO0184 0.74 -2.9 188,815 + SO0184 0.74 -1.4 188,815 + SO0184 0.74 +2.7 188,823 - SO0184 0.76 -1.6 188,823 - SO0184 0.76 -1.9 188,828 + SO0184 0.77 +1.3 188,933 + +1.9 188,933 + +1.1 188,934 + -2.8 188,979 + -3.5 189,047 + +0.5 189,055 - SO0185 0.11 +0.6 189,064 + SO0185 0.13 -0.5 189,148 - SO0185 0.29 -0.1 189,150 + SO0185 0.29 +0.7 189,194 + SO0185 0.37 -1.4 189,196 - SO0185 0.38 +0.6 189,197 - SO0185 0.38 +1.2 189,206 + SO0185 0.40 -2.2 189,209 - SO0185 0.40 +0.1 189,350 + SO0185 0.67 +0.4 189,378 - SO0185 0.72 +0.3 189,378 - SO0185 0.72 -2.2 189,390 + SO0185 0.74 +1.3 189,390 + SO0185 0.74 -2.2 189,390 + SO0185 0.74 +3.5 189,398 - SO0185 0.76 -0.4 189,398 - SO0185 0.76 +0.3 189,398 - SO0185 0.76 +1.0 189,398 - SO0185 0.76 +0.1 189,446 - SO0185 0.85 -0.2 189,536 + +2.6 189,559 - -1.2 189,606 + +0.3 189,606 - -0.2 189,707 - SO0186 0.28 +0.3 189,709 + SO0186 0.28 -0.5 189,709 + SO0186 0.28 +1.0 189,743 + SO0186 0.34 -0.2 189,760 + SO0186 0.38 -2.6 189,774 - SO0186 0.40 -1.4 189,791 + SO0186 0.43 -2.5 189,791 + SO0186 0.43 +0.2 189,791 + SO0186 0.43 -1.1 189,791 + SO0186 0.43 +1.7 189,791 + SO0186 0.43 +0.1 189,791 + SO0186 0.43 +0.5 189,799 - SO0186 0.45 +0.9 189,799 - SO0186 0.45 +0.6 189,799 - SO0186 0.45 -0.5 189,799 - SO0186 0.45 -2.5 189,844 + SO0186 0.53 +1.8 189,846 + SO0186 0.53 -2.4 189,852 - SO0186 0.54 -0.3 189,852 - SO0186 0.54 +1.0 189,852 - SO0186 0.54 -1.1 189,929 - SO0186 0.68 -0.9
Or see this region's nucleotide sequence