Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2772 and Dsui_2773 are separated by 338 nucleotides Dsui_2773 and Dsui_2775 are separated by 951 nucleotides
Dsui_2772: Dsui_2772 - uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,936,090 to 2,936,551
_2772
Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207
_2773
Dsui_2775: Dsui_2775 - hypothetical protein, at 2,938,159 to 2,938,806
_2775
Position (kb)
2936
2937
2938 Strain fitness (log2 ratio)
-1
0
1 at 2936.106 kb on - strand at 2936.230 kb on - strand, within Dsui_2772 at 2936.241 kb on - strand, within Dsui_2772 at 2936.440 kb on - strand, within Dsui_2772 at 2936.501 kb on - strand, within Dsui_2772 at 2936.662 kb on - strand at 2937.104 kb on - strand at 2937.108 kb on + strand, within Dsui_2773 at 2937.120 kb on + strand, within Dsui_2773 at 2937.135 kb on - strand, within Dsui_2773 at 2937.346 kb on + strand at 2937.441 kb on + strand at 2937.468 kb on + strand at 2937.528 kb on - strand at 2937.548 kb on - strand at 2937.619 kb on - strand at 2937.771 kb on + strand at 2937.779 kb on - strand at 2937.794 kb on + strand at 2937.993 kb on + strand at 2938.006 kb on - strand at 2938.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5 remove 2,936,106 - -0.0 2,936,230 - Dsui_2772 0.30 -0.1 2,936,241 - Dsui_2772 0.33 -0.6 2,936,440 - Dsui_2772 0.76 -0.7 2,936,501 - Dsui_2772 0.89 -0.4 2,936,662 - -0.1 2,937,104 - -1.0 2,937,108 + Dsui_2773 0.69 -0.9 2,937,120 + Dsui_2773 0.72 -0.5 2,937,135 - Dsui_2773 0.77 -0.5 2,937,346 + -1.2 2,937,441 + -1.1 2,937,468 + +0.0 2,937,528 - -0.1 2,937,548 - -0.7 2,937,619 - -0.2 2,937,771 + -0.9 2,937,779 - -0.3 2,937,794 + -0.3 2,937,993 + +1.2 2,938,006 - -1.1 2,938,008 + -0.3
Or see this region's nucleotide sequence