Strain Fitness in Dechlorosoma suillum PS around Dsui_2773

Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2772 and Dsui_2773 are separated by 338 nucleotidesDsui_2773 and Dsui_2775 are separated by 951 nucleotides Dsui_2772: Dsui_2772 - uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,936,090 to 2,936,551 _2772 Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207 _2773 Dsui_2775: Dsui_2775 - hypothetical protein, at 2,938,159 to 2,938,806 _2775 Position (kb) 2936 2937 2938Strain fitness (log2 ratio) -1 0 1at 2936.106 kb on - strandat 2936.230 kb on - strand, within Dsui_2772at 2936.241 kb on - strand, within Dsui_2772at 2936.440 kb on - strand, within Dsui_2772at 2936.501 kb on - strand, within Dsui_2772at 2936.662 kb on - strandat 2937.104 kb on - strandat 2937.108 kb on + strand, within Dsui_2773at 2937.120 kb on + strand, within Dsui_2773at 2937.135 kb on - strand, within Dsui_2773at 2937.346 kb on + strandat 2937.441 kb on + strandat 2937.468 kb on + strandat 2937.528 kb on - strandat 2937.548 kb on - strandat 2937.619 kb on - strandat 2937.771 kb on + strandat 2937.779 kb on - strandat 2937.794 kb on + strandat 2937.993 kb on + strandat 2938.006 kb on - strandat 2938.008 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5
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2,936,106 - -0.0
2,936,230 - Dsui_2772 0.30 -0.1
2,936,241 - Dsui_2772 0.33 -0.6
2,936,440 - Dsui_2772 0.76 -0.7
2,936,501 - Dsui_2772 0.89 -0.4
2,936,662 - -0.1
2,937,104 - -1.0
2,937,108 + Dsui_2773 0.69 -0.9
2,937,120 + Dsui_2773 0.72 -0.5
2,937,135 - Dsui_2773 0.77 -0.5
2,937,346 + -1.2
2,937,441 + -1.1
2,937,468 + +0.0
2,937,528 - -0.1
2,937,548 - -0.7
2,937,619 - -0.2
2,937,771 + -0.9
2,937,779 - -0.3
2,937,794 + -0.3
2,937,993 + +1.2
2,938,006 - -1.1
2,938,008 + -0.3

Or see this region's nucleotide sequence