Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1248 and Dsui_1249 are separated by 71 nucleotides Dsui_1249 and Dsui_1250 overlap by 4 nucleotides
Dsui_1248: Dsui_1248 - protein containing C-terminal region/beta chain of methionyl-tRNA synthetase, at 1,309,794 to 1,311,923
_1248
Dsui_1249: Dsui_1249 - hypothetical protein, at 1,311,995 to 1,312,267
_1249
Dsui_1250: Dsui_1250 - sulfate permease-like transporter, MFS superfamily, at 1,312,264 to 1,313,931
_1250
Position (kb)
1311
1312
1313 Strain fitness (log2 ratio)
-1
0
1 at 1311.425 kb on + strand, within Dsui_1248 at 1311.972 kb on + strand at 1311.979 kb on + strand at 1312.001 kb on - strand at 1312.020 kb on + strand at 1312.056 kb on + strand, within Dsui_1249 at 1312.135 kb on + strand, within Dsui_1249 at 1312.187 kb on - strand, within Dsui_1249 at 1312.192 kb on + strand, within Dsui_1249 at 1312.200 kb on - strand, within Dsui_1249 at 1312.224 kb on + strand, within Dsui_1249 at 1312.513 kb on + strand, within Dsui_1250 at 1312.594 kb on + strand, within Dsui_1250 at 1312.594 kb on + strand, within Dsui_1250 at 1312.602 kb on - strand, within Dsui_1250 at 1312.602 kb on - strand at 1312.612 kb on + strand, within Dsui_1250 at 1312.798 kb on - strand, within Dsui_1250 at 1312.808 kb on - strand, within Dsui_1250 at 1312.861 kb on - strand, within Dsui_1250 at 1312.865 kb on - strand, within Dsui_1250 at 1313.009 kb on + strand, within Dsui_1250 at 1313.017 kb on - strand, within Dsui_1250 at 1313.063 kb on - strand, within Dsui_1250 at 1313.165 kb on + strand, within Dsui_1250 at 1313.213 kb on + strand, within Dsui_1250 at 1313.221 kb on - strand, within Dsui_1250 at 1313.265 kb on - strand, within Dsui_1250 at 1313.266 kb on - strand, within Dsui_1250
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5 remove 1,311,425 + Dsui_1248 0.77 -0.1 1,311,972 + +0.2 1,311,979 + +0.0 1,312,001 - +0.6 1,312,020 + +0.1 1,312,056 + Dsui_1249 0.22 -0.3 1,312,135 + Dsui_1249 0.51 +0.2 1,312,187 - Dsui_1249 0.70 +0.7 1,312,192 + Dsui_1249 0.72 +0.2 1,312,200 - Dsui_1249 0.75 -0.3 1,312,224 + Dsui_1249 0.84 -0.3 1,312,513 + Dsui_1250 0.15 -0.0 1,312,594 + Dsui_1250 0.20 -0.4 1,312,594 + Dsui_1250 0.20 -1.6 1,312,602 - Dsui_1250 0.20 -0.1 1,312,602 - +1.3 1,312,612 + Dsui_1250 0.21 -0.5 1,312,798 - Dsui_1250 0.32 +1.4 1,312,808 - Dsui_1250 0.33 -0.7 1,312,861 - Dsui_1250 0.36 -0.5 1,312,865 - Dsui_1250 0.36 +0.2 1,313,009 + Dsui_1250 0.45 -0.1 1,313,017 - Dsui_1250 0.45 -0.4 1,313,063 - Dsui_1250 0.48 -0.1 1,313,165 + Dsui_1250 0.54 +0.1 1,313,213 + Dsui_1250 0.57 -0.7 1,313,221 - Dsui_1250 0.57 -0.2 1,313,265 - Dsui_1250 0.60 -0.4 1,313,266 - Dsui_1250 0.60 -0.4
Or see this region's nucleotide sequence