Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3235

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
3,403,932	-		Dshi_3234	0.74	-0.3
3,403,939	-		Dshi_3234	0.75	-0.1
3,403,958	+		Dshi_3234	0.76	+0.2
3,404,075	+		Dshi_3234	0.85	-0.7
3,404,116	-		Dshi_3234	0.88	+0.2
3,404,161	+				-1.0
3,404,194	-				+0.8
3,404,278	+				-0.4
3,404,278	+				+1.0
3,404,317	-				-0.5
3,404,341	-				+0.3
3,404,458	+				-0.6
3,404,541	-				-1.2
3,404,822	-				-0.7
3,404,841	+				-1.3
3,404,858	+				-0.0
3,405,177	-		Dshi_3235	0.80	+0.5
3,405,203	+		Dshi_3235	0.86	-0.9
3,405,206	-		Dshi_3235	0.87	+0.3
3,405,206	-		Dshi_3235	0.87	+1.3
3,405,259	+				-1.8
3,405,310	-				-0.1
3,405,320	-				+1.9
3,405,322	+				-0.0
3,405,322	+				-0.1
3,405,330	-				+0.3
3,405,330	-				-0.1
3,405,378	-				-0.4
3,405,378	-				-0.2
3,405,378	-				+1.2
3,405,380	+				-1.2
3,405,380	-				-0.2
3,405,384	+				-0.3
3,405,415	+				-0.4
3,405,562	-		Dshi_3236	0.24	-0.5
3,405,697	+		Dshi_3236	0.45	+0.1
3,405,763	-		Dshi_3236	0.55	+2.0
3,405,803	+		Dshi_3236	0.61	+2.0
3,406,141	-				+1.0
3,406,148	-				+1.2
3,406,198	+				+0.2
3,406,239	-				+0.4
3,406,255	-		Dshi_3237	0.11	-0.2