Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3147
Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,314,091 | + | Dshi_3147 | 0.18 | -0.4 | |
3,314,091 | - | Dshi_3147 | 0.18 | -2.4 | |
3,314,228 | + | Dshi_3147 | 0.37 | -0.6 | |
3,314,250 | + | Dshi_3147 | 0.40 | -0.8 | |
3,314,341 | - | Dshi_3147 | 0.52 | -0.6 | |
3,314,418 | - | Dshi_3147 | 0.62 | -0.8 | |
3,314,982 | + | Dshi_3148 | 0.59 | +0.3 | |
3,315,075 | - | Dshi_3148 | 0.79 | -1.1 | |
3,315,081 | + | Dshi_3148 | 0.80 | -0.3 | |
3,315,186 | + | -0.2 | |||
3,315,191 | + | -0.5 | |||
3,315,227 | + | +0.0 | |||
3,315,294 | + | Dshi_3149 | 0.15 | -2.0 | |
3,315,375 | + | Dshi_3149 | 0.25 | -0.4 | |
3,315,385 | + | Dshi_3149 | 0.26 | -1.3 | |
3,315,424 | - | Dshi_3149 | 0.31 | -0.2 | |
3,315,487 | - | Dshi_3149 | 0.39 | -0.3 | |
3,315,687 | + | Dshi_3149 | 0.63 | +0.4 |
Or see this region's nucleotide sequence