Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2657
Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,813,654 | - | +1.0 | |||
2,813,880 | - | Dshi_2657 | 0.23 | -0.3 | |
2,813,880 | - | Dshi_2657 | 0.23 | -0.2 | |
2,813,965 | - | Dshi_2657 | 0.37 | -0.6 | |
2,814,022 | - | Dshi_2657 | 0.47 | -0.4 | |
2,814,050 | - | Dshi_2657 | 0.51 | -0.3 | |
2,814,086 | + | Dshi_2657 | 0.58 | +0.3 | |
2,814,103 | - | Dshi_2657 | 0.60 | -1.1 | |
2,814,149 | + | Dshi_2657 | 0.68 | -2.3 | |
2,814,151 | + | Dshi_2657 | 0.69 | -0.2 | |
2,814,157 | - | Dshi_2657 | 0.70 | -1.0 | |
2,814,377 | + | +0.7 | |||
2,814,422 | - | +0.9 | |||
2,814,423 | - | +0.3 | |||
2,814,427 | - | +0.3 | |||
2,814,428 | - | +0.2 | |||
2,814,456 | - | -0.6 | |||
2,814,520 | - | -0.2 | |||
2,814,545 | + | +0.3 | |||
2,814,550 | + | +0.4 | |||
2,814,553 | - | +0.2 | |||
2,814,926 | - | Dshi_2658 | 0.52 | +0.6 | |
2,814,954 | - | Dshi_2658 | 0.56 | -0.1 | |
2,815,109 | + | Dshi_2658 | 0.75 | -0.0 | |
2,815,121 | - | Dshi_2658 | 0.77 | +2.1 | |
2,815,322 | - | +0.4 |
Or see this region's nucleotide sequence