Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2430 and Dshi_2431 overlap by 25 nucleotides Dshi_2431 and Dshi_2432 overlap by 4 nucleotides Dshi_2432 and Dshi_2433 are separated by 12 nucleotides
Dshi_2430: Dshi_2430 - L-rhamnose 1-epimerase (RefSeq), at 2,571,609 to 2,571,947
_2430
Dshi_2431: Dshi_2431 - Monosaccharide-transporting ATPase (RefSeq), at 2,571,923 to 2,572,909
_2431
Dshi_2432: Dshi_2432 - Monosaccharide-transporting ATPase (RefSeq), at 2,572,906 to 2,573,889
_2432
Dshi_2433: Dshi_2433 - ABC transporter related (RefSeq), at 2,573,902 to 2,575,434
_2433
Position (kb)
2572
2573
2574 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2572.168 kb on + strand, within Dshi_2431 at 2572.181 kb on - strand, within Dshi_2431 at 2572.301 kb on + strand, within Dshi_2431 at 2572.401 kb on + strand, within Dshi_2431 at 2572.409 kb on - strand, within Dshi_2431 at 2572.419 kb on - strand, within Dshi_2431 at 2572.424 kb on - strand, within Dshi_2431 at 2572.427 kb on + strand, within Dshi_2431 at 2572.465 kb on + strand, within Dshi_2431 at 2572.475 kb on - strand, within Dshi_2431 at 2572.513 kb on + strand, within Dshi_2431 at 2572.538 kb on + strand, within Dshi_2431 at 2572.560 kb on + strand, within Dshi_2431 at 2572.568 kb on - strand, within Dshi_2431 at 2572.570 kb on + strand, within Dshi_2431 at 2572.599 kb on - strand, within Dshi_2431 at 2572.605 kb on - strand, within Dshi_2431 at 2572.684 kb on + strand, within Dshi_2431 at 2572.747 kb on - strand, within Dshi_2431 at 2572.759 kb on + strand, within Dshi_2431 at 2572.759 kb on + strand, within Dshi_2431 at 2572.877 kb on - strand at 2572.935 kb on - strand at 2572.996 kb on + strand at 2573.328 kb on + strand, within Dshi_2432 at 2573.329 kb on + strand, within Dshi_2432 at 2573.329 kb on + strand, within Dshi_2432 at 2573.329 kb on + strand, within Dshi_2432 at 2573.337 kb on - strand, within Dshi_2432 at 2573.389 kb on + strand, within Dshi_2432 at 2573.514 kb on + strand, within Dshi_2432 at 2573.764 kb on + strand, within Dshi_2432 at 2573.765 kb on - strand, within Dshi_2432 at 2573.838 kb on + strand at 2573.890 kb on + strand at 2573.929 kb on + strand at 2574.010 kb on - strand at 2574.191 kb on + strand, within Dshi_2433 at 2574.245 kb on - strand, within Dshi_2433 at 2574.285 kb on + strand, within Dshi_2433 at 2574.335 kb on - strand, within Dshi_2433 at 2574.359 kb on - strand, within Dshi_2433 at 2574.518 kb on + strand, within Dshi_2433 at 2574.526 kb on - strand, within Dshi_2433 at 2574.595 kb on + strand, within Dshi_2433 at 2574.601 kb on + strand, within Dshi_2433 at 2574.601 kb on + strand, within Dshi_2433 at 2574.601 kb on + strand, within Dshi_2433 at 2574.609 kb on - strand, within Dshi_2433 at 2574.609 kb on - strand, within Dshi_2433 at 2574.609 kb on - strand, within Dshi_2433 at 2574.610 kb on + strand, within Dshi_2433 at 2574.628 kb on + strand, within Dshi_2433 at 2574.638 kb on - strand, within Dshi_2433 at 2574.671 kb on - strand, within Dshi_2433 at 2574.760 kb on - strand, within Dshi_2433 at 2574.830 kb on + strand, within Dshi_2433
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,572,168 + Dshi_2431 0.25 -1.6 2,572,181 - Dshi_2431 0.26 -1.6 2,572,301 + Dshi_2431 0.38 -0.6 2,572,401 + Dshi_2431 0.48 +0.6 2,572,409 - Dshi_2431 0.49 -0.7 2,572,419 - Dshi_2431 0.50 +0.0 2,572,424 - Dshi_2431 0.51 +1.0 2,572,427 + Dshi_2431 0.51 -1.4 2,572,465 + Dshi_2431 0.55 +0.0 2,572,475 - Dshi_2431 0.56 +0.1 2,572,513 + Dshi_2431 0.60 +0.1 2,572,538 + Dshi_2431 0.62 -0.9 2,572,560 + Dshi_2431 0.65 +0.5 2,572,568 - Dshi_2431 0.65 +0.2 2,572,570 + Dshi_2431 0.66 +0.2 2,572,599 - Dshi_2431 0.68 +0.4 2,572,605 - Dshi_2431 0.69 +1.1 2,572,684 + Dshi_2431 0.77 -0.5 2,572,747 - Dshi_2431 0.83 -1.1 2,572,759 + Dshi_2431 0.85 -0.5 2,572,759 + Dshi_2431 0.85 -0.2 2,572,877 - -0.5 2,572,935 - +0.1 2,572,996 + -0.1 2,573,328 + Dshi_2432 0.43 +1.0 2,573,329 + Dshi_2432 0.43 -0.2 2,573,329 + Dshi_2432 0.43 +0.4 2,573,329 + Dshi_2432 0.43 -1.2 2,573,337 - Dshi_2432 0.44 +0.7 2,573,389 + Dshi_2432 0.49 +0.6 2,573,514 + Dshi_2432 0.62 +0.8 2,573,764 + Dshi_2432 0.87 -0.6 2,573,765 - Dshi_2432 0.87 +0.5 2,573,838 + +0.3 2,573,890 + +0.4 2,573,929 + +1.8 2,574,010 - -0.3 2,574,191 + Dshi_2433 0.19 +0.2 2,574,245 - Dshi_2433 0.22 -2.0 2,574,285 + Dshi_2433 0.25 +0.8 2,574,335 - Dshi_2433 0.28 +0.1 2,574,359 - Dshi_2433 0.30 -0.5 2,574,518 + Dshi_2433 0.40 -0.5 2,574,526 - Dshi_2433 0.41 -1.5 2,574,595 + Dshi_2433 0.45 +0.1 2,574,601 + Dshi_2433 0.46 +0.1 2,574,601 + Dshi_2433 0.46 -1.1 2,574,601 + Dshi_2433 0.46 +0.6 2,574,609 - Dshi_2433 0.46 -1.0 2,574,609 - Dshi_2433 0.46 -0.5 2,574,609 - Dshi_2433 0.46 -0.8 2,574,610 + Dshi_2433 0.46 -1.7 2,574,628 + Dshi_2433 0.47 +0.3 2,574,638 - Dshi_2433 0.48 -0.7 2,574,671 - Dshi_2433 0.50 +0.2 2,574,760 - Dshi_2433 0.56 -0.1 2,574,830 + Dshi_2433 0.61 -1.8
Or see this region's nucleotide sequence