Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1252

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
1,298,275	-		Dshi_1250	0.78	-0.2
1,298,316	+		Dshi_1250	0.82	+0.2
1,298,345	-		Dshi_1250	0.84	-1.3
1,298,688	+		Dshi_1251	0.60	-0.8
1,298,707	+		Dshi_1251	0.67	-1.0
1,298,714	-		Dshi_1251	0.69	+0.0
1,298,722	+		Dshi_1251	0.72	-2.0
1,298,732	+		Dshi_1251	0.75	-0.6
1,298,811	+				+0.5
1,298,857	+				+0.2
1,298,876	-				-1.0
1,298,902	-				+0.4
1,298,955	+				-1.1
1,299,006	+				-0.4
1,299,035	+				-0.3
1,299,041	+				+0.6
1,299,120	+				-0.1
1,299,120	+				+0.6
1,299,120	+				-0.4
1,299,120	+				+1.1
1,299,120	+				+0.3
1,299,120	+				+0.1
1,299,125	+				+0.3
1,299,133	-				-1.3
1,299,135	+				+0.3
1,299,138	-				+0.0
1,299,140	-				-0.6
1,299,206	-				-0.9
1,299,225	-				+0.6
1,299,251	+				-0.3
1,299,259	-				-2.2
1,299,262	-				-0.9
1,299,287	-				-0.6
1,299,317	+				-0.0
1,299,368	+		Dshi_1252	0.16	-2.8
1,299,420	+		Dshi_1252	0.23	-0.1
1,299,424	-		Dshi_1252	0.23	+0.2
1,299,446	+		Dshi_1252	0.26	-0.1
1,299,463	+		Dshi_1252	0.29	+0.4
1,299,540	+		Dshi_1252	0.39	-1.0
1,299,542	+		Dshi_1252	0.40	-0.5
1,299,548	-		Dshi_1252	0.41	-0.2
1,299,548	-		Dshi_1252	0.41	+0.9
1,299,550	-		Dshi_1252	0.41	-0.1
1,299,557	-		Dshi_1252	0.42	-0.1
1,299,612	-		Dshi_1252	0.49	-0.9
1,299,678	+		Dshi_1252	0.59	+0.1
1,299,701	+		Dshi_1252	0.62	-0.4
1,299,709	-		Dshi_1252	0.63	+0.1
1,299,709	-		Dshi_1252	0.63	+0.8
1,299,738	-		Dshi_1252	0.67	+0.6
1,299,742	-		Dshi_1252	0.67	-0.6
1,299,757	+		Dshi_1252	0.69	+1.6
1,299,805	-		Dshi_1252	0.76	-0.4
1,299,917	+				+0.6
1,299,985	-				-0.2
1,299,996	-				-0.0
1,300,142	+				-1.5
1,300,142	+				-1.3
1,300,372	+		Dshi_1253	0.33	-0.5
1,300,380	-		Dshi_1253	0.34	+0.3
1,300,380	-		Dshi_1253	0.34	-0.8
1,300,380	-		Dshi_1253	0.34	-0.4
1,300,380	-		Dshi_1253	0.34	+0.0
1,300,380	-		Dshi_1253	0.34	+0.4
1,300,380	-		Dshi_1253	0.34	+0.3
1,300,418	+		Dshi_1253	0.38	-0.2
1,300,441	+		Dshi_1253	0.41	+1.1
1,300,470	-		Dshi_1253	0.44	-0.3
1,300,578	-		Dshi_1253	0.57	-1.3
1,300,587	+		Dshi_1253	0.58	+0.3
1,300,963	+				-0.7
1,300,963	+				+0.2
1,300,975	-				-1.1