Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1170
Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,199,729 | + | Dshi_1169 | 0.30 | -0.2 | |
1,199,767 | + | Dshi_1169 | 0.33 | +0.7 | |
1,199,890 | - | Dshi_1169 | 0.43 | +0.3 | |
1,199,935 | + | Dshi_1169 | 0.46 | -0.2 | |
1,199,997 | + | Dshi_1169 | 0.51 | -0.4 | |
1,200,054 | - | Dshi_1169 | 0.56 | -1.6 | |
1,200,054 | - | Dshi_1169 | 0.56 | +0.5 | |
1,200,092 | + | Dshi_1169 | 0.59 | -0.9 | |
1,200,113 | - | Dshi_1169 | 0.60 | -0.1 | |
1,200,336 | - | Dshi_1169 | 0.78 | -1.3 | |
1,200,438 | + | Dshi_1169 | 0.86 | +1.0 | |
1,200,645 | + | -0.3 | |||
1,200,698 | - | Dshi_1170 | 0.14 | -1.4 | |
1,200,899 | + | Dshi_1170 | 0.46 | +0.3 | |
1,200,907 | - | Dshi_1170 | 0.47 | +0.6 | |
1,200,927 | + | Dshi_1170 | 0.51 | -0.3 | |
1,201,032 | - | Dshi_1170 | 0.67 | -0.1 | |
1,201,235 | + | +0.2 | |||
1,201,235 | + | -0.3 | |||
1,201,296 | + | -0.2 | |||
1,201,304 | - | +0.3 | |||
1,201,363 | - | -0.5 | |||
1,201,363 | - | +0.2 | |||
1,202,168 | + | Dshi_1171 | 0.30 | +0.0 |
Or see this region's nucleotide sequence