Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0773 and Dshi_0774 are separated by 42 nucleotides Dshi_0774 and Dshi_0775 are separated by 548 nucleotides Dshi_0775 and Dshi_0776 are separated by 278 nucleotides
Dshi_0773: Dshi_0773 - protein of unknown function DUF692 (RefSeq), at 778,207 to 779,157
_0773
Dshi_0774: Dshi_0774 - hypothetical protein (RefSeq), at 779,200 to 779,487
_0774
Dshi_0775: Dshi_0775 - tartrate dehydrogenase (RefSeq), at 780,036 to 781,115
_0775
Dshi_0776: Dshi_0776 - cobalamin B12-binding domain protein (RefSeq), at 781,394 to 782,179
_0776
Position (kb)
780
781
782 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 779.256 kb on + strand, within Dshi_0774 at 779.324 kb on - strand, within Dshi_0774 at 779.335 kb on + strand, within Dshi_0774 at 779.410 kb on - strand, within Dshi_0774 at 779.415 kb on - strand, within Dshi_0774 at 779.417 kb on + strand, within Dshi_0774 at 779.431 kb on + strand, within Dshi_0774 at 779.439 kb on - strand, within Dshi_0774 at 779.460 kb on + strand at 779.522 kb on + strand at 779.530 kb on - strand at 779.695 kb on - strand at 779.706 kb on + strand at 779.706 kb on + strand at 779.714 kb on - strand at 779.733 kb on + strand at 779.804 kb on + strand at 779.814 kb on + strand at 779.836 kb on - strand at 779.836 kb on - strand at 779.870 kb on + strand at 779.878 kb on - strand at 779.908 kb on + strand at 779.963 kb on + strand at 779.963 kb on + strand at 780.105 kb on - strand at 780.136 kb on + strand at 780.221 kb on + strand, within Dshi_0775 at 780.368 kb on + strand, within Dshi_0775 at 780.401 kb on - strand, within Dshi_0775 at 780.418 kb on - strand, within Dshi_0775 at 780.459 kb on - strand, within Dshi_0775 at 780.510 kb on - strand, within Dshi_0775 at 780.638 kb on + strand, within Dshi_0775 at 780.638 kb on - strand, within Dshi_0775 at 780.745 kb on + strand, within Dshi_0775 at 780.781 kb on - strand, within Dshi_0775 at 780.794 kb on + strand, within Dshi_0775 at 780.938 kb on + strand, within Dshi_0775 at 780.943 kb on + strand, within Dshi_0775 at 780.946 kb on - strand, within Dshi_0775 at 781.007 kb on + strand, within Dshi_0775 at 781.026 kb on + strand at 781.081 kb on - strand at 781.395 kb on + strand at 781.569 kb on + strand, within Dshi_0776 at 781.645 kb on - strand, within Dshi_0776 at 781.709 kb on + strand, within Dshi_0776 at 782.003 kb on - strand, within Dshi_0776 at 782.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 779,256 + Dshi_0774 0.19 -0.1 779,324 - Dshi_0774 0.43 +1.5 779,335 + Dshi_0774 0.47 -1.5 779,410 - Dshi_0774 0.73 -0.1 779,415 - Dshi_0774 0.75 -2.0 779,417 + Dshi_0774 0.75 +0.7 779,431 + Dshi_0774 0.80 -0.1 779,439 - Dshi_0774 0.83 +0.2 779,460 + -0.0 779,522 + +1.1 779,530 - +0.7 779,695 - -0.8 779,706 + -1.5 779,706 + +0.5 779,714 - +1.3 779,733 + -1.5 779,804 + -0.7 779,814 + -0.8 779,836 - -0.5 779,836 - -0.3 779,870 + +0.0 779,878 - -0.8 779,908 + +0.9 779,963 + -0.8 779,963 + -1.5 780,105 - -0.8 780,136 + -0.3 780,221 + Dshi_0775 0.17 -1.0 780,368 + Dshi_0775 0.31 -0.9 780,401 - Dshi_0775 0.34 -2.0 780,418 - Dshi_0775 0.35 -1.6 780,459 - Dshi_0775 0.39 -0.2 780,510 - Dshi_0775 0.44 -1.1 780,638 + Dshi_0775 0.56 +0.1 780,638 - Dshi_0775 0.56 -0.5 780,745 + Dshi_0775 0.66 -0.1 780,781 - Dshi_0775 0.69 +0.6 780,794 + Dshi_0775 0.70 -0.3 780,938 + Dshi_0775 0.84 -1.3 780,943 + Dshi_0775 0.84 +1.1 780,946 - Dshi_0775 0.84 -3.0 781,007 + Dshi_0775 0.90 +1.3 781,026 + -0.5 781,081 - +0.6 781,395 + +0.5 781,569 + Dshi_0776 0.22 -0.5 781,645 - Dshi_0776 0.32 -0.6 781,709 + Dshi_0776 0.40 +0.2 782,003 - Dshi_0776 0.77 -0.4 782,113 - -1.2
Or see this region's nucleotide sequence