Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0749 and Dshi_0750 are separated by 658 nucleotides Dshi_0750 and Dshi_0751 are separated by 180 nucleotides
Dshi_0749: Dshi_0749 - DNA topoisomerase IV, B subunit (RefSeq), at 758,372 to 760,336
_0749
Dshi_0750: Dshi_0750 - hypothetical protein (RefSeq), at 760,995 to 761,789
_0750
Dshi_0751: Dshi_0751 - protein of unknown function DUF344 (RefSeq), at 761,970 to 762,914
_0751
Position (kb) 760
761
762 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 760.394 kb on - strand at 760.486 kb on - strand at 760.577 kb on + strand at 760.685 kb on + strand at 760.713 kb on - strand at 760.748 kb on + strand at 760.772 kb on + strand at 760.844 kb on - strand at 760.947 kb on - strand at 760.987 kb on - strand at 761.057 kb on - strand at 761.062 kb on - strand at 761.189 kb on - strand, within Dshi_0750 at 761.205 kb on + strand, within Dshi_0750 at 761.307 kb on - strand, within Dshi_0750 at 761.403 kb on - strand, within Dshi_0750 at 761.455 kb on + strand, within Dshi_0750 at 761.482 kb on - strand at 761.490 kb on + strand, within Dshi_0750 at 761.503 kb on + strand, within Dshi_0750 at 761.511 kb on - strand, within Dshi_0750 at 761.567 kb on + strand, within Dshi_0750 at 761.659 kb on + strand, within Dshi_0750 at 761.667 kb on - strand, within Dshi_0750 at 761.722 kb on + strand at 761.722 kb on + strand at 761.826 kb on - strand at 761.862 kb on + strand at 761.954 kb on + strand at 761.962 kb on - strand at 761.967 kb on + strand at 762.032 kb on - strand at 762.183 kb on - strand, within Dshi_0751 at 762.185 kb on - strand, within Dshi_0751 at 762.187 kb on + strand, within Dshi_0751 at 762.251 kb on - strand, within Dshi_0751 at 762.311 kb on + strand, within Dshi_0751 at 762.319 kb on - strand, within Dshi_0751 at 762.374 kb on - strand, within Dshi_0751 at 762.402 kb on - strand, within Dshi_0751 at 762.423 kb on + strand, within Dshi_0751 at 762.434 kb on + strand, within Dshi_0751 at 762.442 kb on - strand, within Dshi_0751 at 762.554 kb on + strand, within Dshi_0751 at 762.572 kb on + strand, within Dshi_0751 at 762.662 kb on + strand, within Dshi_0751 at 762.664 kb on - strand, within Dshi_0751 at 762.713 kb on - strand, within Dshi_0751
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 760,394 - +1.3 760,486 - -0.2 760,577 + +1.1 760,685 + -0.7 760,713 - -0.3 760,748 + +0.3 760,772 + +0.1 760,844 - -2.6 760,947 - -1.0 760,987 - -0.4 761,057 - -2.8 761,062 - +0.1 761,189 - Dshi_0750 0.24 -0.9 761,205 + Dshi_0750 0.26 -0.1 761,307 - Dshi_0750 0.39 -0.2 761,403 - Dshi_0750 0.51 +0.2 761,455 + Dshi_0750 0.58 -1.4 761,482 - +1.1 761,490 + Dshi_0750 0.62 -0.4 761,503 + Dshi_0750 0.64 -2.2 761,511 - Dshi_0750 0.65 +1.0 761,567 + Dshi_0750 0.72 +0.4 761,659 + Dshi_0750 0.84 +1.5 761,667 - Dshi_0750 0.85 +0.2 761,722 + -2.0 761,722 + -0.2 761,826 - -1.3 761,862 + -0.8 761,954 + -0.9 761,962 - +0.3 761,967 + +0.0 762,032 - -0.9 762,183 - Dshi_0751 0.23 +0.2 762,185 - Dshi_0751 0.23 +0.1 762,187 + Dshi_0751 0.23 -0.7 762,251 - Dshi_0751 0.30 +0.3 762,311 + Dshi_0751 0.36 +0.3 762,319 - Dshi_0751 0.37 +0.9 762,374 - Dshi_0751 0.43 -1.2 762,402 - Dshi_0751 0.46 -0.6 762,423 + Dshi_0751 0.48 +0.1 762,434 + Dshi_0751 0.49 +0.7 762,442 - Dshi_0751 0.50 -3.2 762,554 + Dshi_0751 0.62 -1.1 762,572 + Dshi_0751 0.64 +0.7 762,662 + Dshi_0751 0.73 -0.1 762,664 - Dshi_0751 0.73 +0.2 762,713 - Dshi_0751 0.79 -0.5
Or see this region's nucleotide sequence