Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0586 and Dshi_0587 overlap by 29 nucleotides Dshi_0587 and Dshi_0588 are separated by 77 nucleotides Dshi_0588 and Dshi_0589 overlap by 4 nucleotides
Dshi_0586: Dshi_0586 - permease (RefSeq), at 577,452 to 578,498
_0586
Dshi_0587: Dshi_0587 - putative transcriptional regulator, ArsR family (RefSeq), at 578,470 to 578,814
_0587
Dshi_0588: Dshi_0588 - uracil-DNA glycosylase superfamily (RefSeq), at 578,892 to 579,500
_0588
Dshi_0589: Dshi_0589 - hypothetical protein (RefSeq), at 579,497 to 580,282
_0589
Position (kb) 578
579 Strain fitness (log2 ratio) -2
-1
0
1 at 577.543 kb on + strand at 577.558 kb on - strand, within Dshi_0586 at 577.596 kb on + strand, within Dshi_0586 at 577.615 kb on + strand, within Dshi_0586 at 577.615 kb on + strand, within Dshi_0586 at 577.623 kb on - strand, within Dshi_0586 at 577.644 kb on + strand, within Dshi_0586 at 577.672 kb on - strand, within Dshi_0586 at 577.677 kb on - strand, within Dshi_0586 at 577.709 kb on + strand, within Dshi_0586 at 577.717 kb on - strand, within Dshi_0586 at 577.717 kb on - strand, within Dshi_0586 at 577.717 kb on - strand, within Dshi_0586 at 577.784 kb on - strand, within Dshi_0586 at 577.796 kb on - strand, within Dshi_0586 at 577.869 kb on + strand, within Dshi_0586 at 577.875 kb on + strand, within Dshi_0586 at 577.969 kb on - strand, within Dshi_0586 at 577.974 kb on - strand, within Dshi_0586 at 577.974 kb on - strand, within Dshi_0586 at 578.001 kb on - strand, within Dshi_0586 at 578.073 kb on + strand, within Dshi_0586 at 578.224 kb on - strand, within Dshi_0586 at 578.256 kb on - strand, within Dshi_0586 at 578.324 kb on + strand, within Dshi_0586 at 578.387 kb on + strand, within Dshi_0586 at 578.402 kb on + strand at 578.402 kb on + strand at 578.410 kb on - strand at 578.424 kb on + strand at 578.437 kb on - strand at 578.452 kb on + strand at 578.480 kb on + strand at 578.488 kb on - strand at 578.584 kb on - strand, within Dshi_0587 at 578.628 kb on + strand, within Dshi_0587 at 578.701 kb on - strand, within Dshi_0587 at 578.884 kb on - strand at 579.090 kb on - strand, within Dshi_0588 at 579.109 kb on - strand, within Dshi_0588 at 579.232 kb on - strand, within Dshi_0588 at 579.232 kb on - strand, within Dshi_0588 at 579.232 kb on - strand, within Dshi_0588 at 579.232 kb on - strand, within Dshi_0588 at 579.235 kb on + strand, within Dshi_0588 at 579.322 kb on + strand, within Dshi_0588 at 579.418 kb on + strand, within Dshi_0588 at 579.426 kb on - strand, within Dshi_0588 at 579.427 kb on - strand, within Dshi_0588 at 579.488 kb on + strand at 579.488 kb on + strand at 579.488 kb on + strand at 579.522 kb on - strand at 579.633 kb on - strand, within Dshi_0589 at 579.645 kb on + strand, within Dshi_0589 at 579.655 kb on - strand, within Dshi_0589 at 579.675 kb on + strand, within Dshi_0589 at 579.675 kb on + strand, within Dshi_0589 at 579.738 kb on + strand, within Dshi_0589
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 577,543 + -0.0 577,558 - Dshi_0586 0.10 -1.1 577,596 + Dshi_0586 0.14 -0.5 577,615 + Dshi_0586 0.16 -0.6 577,615 + Dshi_0586 0.16 -0.1 577,623 - Dshi_0586 0.16 +0.3 577,644 + Dshi_0586 0.18 -0.5 577,672 - Dshi_0586 0.21 +0.1 577,677 - Dshi_0586 0.21 -0.2 577,709 + Dshi_0586 0.25 +0.6 577,717 - Dshi_0586 0.25 -0.0 577,717 - Dshi_0586 0.25 -0.1 577,717 - Dshi_0586 0.25 -1.0 577,784 - Dshi_0586 0.32 +0.0 577,796 - Dshi_0586 0.33 -0.1 577,869 + Dshi_0586 0.40 +0.6 577,875 + Dshi_0586 0.40 +0.1 577,969 - Dshi_0586 0.49 +0.9 577,974 - Dshi_0586 0.50 -1.9 577,974 - Dshi_0586 0.50 -0.4 578,001 - Dshi_0586 0.52 +0.1 578,073 + Dshi_0586 0.59 -0.0 578,224 - Dshi_0586 0.74 +0.5 578,256 - Dshi_0586 0.77 +0.1 578,324 + Dshi_0586 0.83 +0.5 578,387 + Dshi_0586 0.89 +0.1 578,402 + +0.2 578,402 + -0.9 578,410 - +0.1 578,424 + -2.1 578,437 - -0.6 578,452 + +0.5 578,480 + -0.2 578,488 - +0.1 578,584 - Dshi_0587 0.33 +0.9 578,628 + Dshi_0587 0.46 -1.0 578,701 - Dshi_0587 0.67 -0.4 578,884 - -1.3 579,090 - Dshi_0588 0.33 +0.0 579,109 - Dshi_0588 0.36 -0.9 579,232 - Dshi_0588 0.56 +0.1 579,232 - Dshi_0588 0.56 +0.6 579,232 - Dshi_0588 0.56 -0.8 579,232 - Dshi_0588 0.56 -0.8 579,235 + Dshi_0588 0.56 +0.3 579,322 + Dshi_0588 0.71 -0.1 579,418 + Dshi_0588 0.86 -0.2 579,426 - Dshi_0588 0.88 -0.6 579,427 - Dshi_0588 0.88 -2.2 579,488 + +1.6 579,488 + +0.1 579,488 + +0.7 579,522 - +0.0 579,633 - Dshi_0589 0.17 -1.9 579,645 + Dshi_0589 0.19 +0.6 579,655 - Dshi_0589 0.20 -1.6 579,675 + Dshi_0589 0.23 -0.3 579,675 + Dshi_0589 0.23 -0.8 579,738 + Dshi_0589 0.31 +0.1
Or see this region's nucleotide sequence