Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0446

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
433,600	+				-0.6
433,625	+				+0.6
433,652	+				-1.0
433,673	+				+2.1
433,673	+				+1.5
433,681	-				-0.9
433,769	+		Dshi_0444	0.15	+1.1
433,784	+		Dshi_0444	0.20	+0.3
433,784	+		Dshi_0444	0.20	+0.8
433,807	+		Dshi_0444	0.28	-0.5
433,831	+		Dshi_0444	0.37	-0.3
433,902	-		Dshi_0444	0.61	+0.8
433,917	+		Dshi_0444	0.67	-0.1
433,918	-		Dshi_0444	0.67	-0.2
433,952	+		Dshi_0444	0.79	+0.2
433,960	-		Dshi_0444	0.82	+0.5
433,989	+				+0.2
433,990	+				-1.5
434,011	+				-1.8
434,024	-				-0.1
434,030	-				+0.9
434,058	+				-1.0
434,117	-		Dshi_0445	0.18	-0.3
434,150	+		Dshi_0445	0.26	-0.2
434,159	+		Dshi_0445	0.29	-0.5
434,167	-		Dshi_0445	0.31	-0.3
434,182	+		Dshi_0445	0.35	-0.2
434,205	+		Dshi_0445	0.40	+1.0
434,213	-		Dshi_0445	0.42	+1.5
434,217	+		Dshi_0445	0.44	+0.4
434,217	+		Dshi_0445	0.44	-1.2
434,264	+		Dshi_0445	0.55	+0.6
434,270	-		Dshi_0445	0.57	-0.4
434,291	-		Dshi_0445	0.62	-0.3
434,301	+		Dshi_0445	0.65	-0.5
434,322	-		Dshi_0445	0.70	-1.2
434,327	+		Dshi_0445	0.72	+0.9
434,376	-		Dshi_0445	0.84	-0.2
434,418	+				-0.1
434,447	+				-1.1
434,447	+				-1.1
434,447	+				-0.4
434,454	-				+1.0
434,454	-				-0.1
434,455	-				-0.1
434,455	-				-0.5
434,455	-				+0.3
434,457	+				-0.6
434,474	+				-1.2
434,496	+				-0.2
434,524	+				+0.4
434,533	-				-0.7
434,553	+				+1.0
434,594	+				+0.2
434,598	+				-0.3
434,599	+				-1.4
434,625	+		Dshi_0446	0.14	-1.1
434,644	-		Dshi_0446	0.18	+0.1
434,683	+		Dshi_0446	0.28	-1.9
434,727	+		Dshi_0446	0.38	-0.5
434,763	+		Dshi_0446	0.47	-1.2
434,780	-		Dshi_0446	0.51	-0.3
434,840	-		Dshi_0446	0.66	+0.2
434,887	+		Dshi_0446	0.77	-0.9
434,945	+				-1.2
435,025	+				-1.7
435,067	+		Dshi_0447	0.11	+1.8
435,082	+		Dshi_0447	0.13	+1.3
435,139	-		Dshi_0447	0.20	-0.1
435,251	+		Dshi_0447	0.34	-0.1
435,259	-		Dshi_0447	0.35	+2.3
435,278	+		Dshi_0447	0.38	-0.3
435,301	+		Dshi_0447	0.41	-0.1
435,301	+		Dshi_0447	0.41	+0.6
435,301	+		Dshi_0447	0.41	+0.3
435,309	-		Dshi_0447	0.42	-0.6
435,309	-		Dshi_0447	0.42	-0.4
435,424	+		Dshi_0447	0.56	-0.0
435,427	-		Dshi_0447	0.57	-0.2
435,427	-		Dshi_0447	0.57	-1.4
435,427	-		Dshi_0447	0.57	+0.4
435,462	+		Dshi_0447	0.61	-0.5
435,462	+		Dshi_0447	0.61	-0.1
435,462	+		Dshi_0447	0.61	+0.7
435,470	-		Dshi_0447	0.62	-0.4
435,549	+		Dshi_0447	0.72	+0.3
435,587	-		Dshi_0447	0.77	-0.1
435,600	+		Dshi_0447	0.78	-1.3
435,601	-		Dshi_0447	0.79	-1.5
435,653	-		Dshi_0447	0.85	+0.4
435,653	-		Dshi_0447	0.85	-2.2
435,718	-				-1.3
435,758	-				-0.5
435,789	+				-1.7
435,789	+				-0.1
435,789	+				+0.2
435,789	+				-1.4
435,791	+				+0.5
435,797	-				+1.1
435,797	-				-0.7
435,840	+				-0.3
435,840	+				+0.8
435,841	+				+0.9
435,848	-				+0.2
435,867	-				-0.1
435,880	+				-0.5
435,884	-				+1.5
435,885	+				+0.6
435,891	+				-0.3
435,893	-				+1.0
435,899	-				-0.0
435,933	+				-0.1
435,933	+				+0.1
435,935	+				+0.6
435,941	-				-0.9
435,941	-				-0.8
435,941	-				-0.5
435,941	-				+0.0
435,943	-				+0.3
435,948	+				+0.4
435,956	-				-0.7
435,956	-				-0.5
435,956	-				+1.5