Strain Fitness in Shewanella amazonensis SB2B around Sama_3561

Experiment: Cobalt chloride 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 0.078125 mM
4,195,242	-				-0.9
4,195,247	+				-0.8
4,195,247	+				+0.0
4,195,247	+				-0.4
4,195,247	+				+0.1
4,195,247	+				-0.3
4,195,252	+				-1.2
4,195,252	+				+1.1
4,195,253	-				+1.2
4,195,253	-				-0.5
4,195,253	-				+0.6
4,195,277	+				-1.5
4,195,277	+				-1.6
4,195,277	+				-0.8
4,195,278	-				+0.4
4,195,278	-				-0.0
4,195,278	-				-0.1
4,195,289	+				+1.1
4,195,290	-				+1.1
4,195,290	-				-1.1
4,195,299	+				+1.5
4,195,300	-				+1.9
4,195,331	+				+0.3
4,195,340	-				-1.1
4,195,378	+				+0.4
4,195,378	+				-1.2
4,195,378	+				+0.5
4,195,379	-				-0.5
4,195,379	-				-0.3
4,195,379	-				+0.6
4,195,423	+				-0.6
4,195,424	-				-1.5
4,195,433	+				-1.9
4,195,434	-				-0.8
4,195,434	-				-0.9
4,195,467	+				-1.9
4,195,468	-				+0.5
4,195,478	+				-0.9
4,195,505	+				-1.7
4,195,514	-				-0.6
4,195,517	+				-1.8
4,195,518	-				-0.3
4,195,518	-				-0.9
4,195,620	+				+0.1
4,195,620	+				-1.6
4,195,678	+				+2.7
4,195,678	+				-1.0
4,195,678	+				-1.0
4,195,679	-				-0.0
4,195,679	-				-1.1
4,195,681	+				-0.9
4,195,681	+				-1.6
4,195,681	+				-0.8
4,195,681	+				-1.8
4,195,681	+				-1.0
4,195,682	-				-0.6
4,195,682	-				-2.0
4,195,682	-				-0.4
4,195,682	-				-0.0
4,195,684	+				-1.2
4,195,684	+				+0.9
4,195,684	+				+0.4
4,195,684	+				+1.9
4,195,684	+				-0.9
4,195,684	+				-0.1
4,195,684	+				-0.2
4,195,685	-				-0.7
4,195,696	+				-0.8
4,195,696	+				-1.8
4,195,696	+				-0.9
4,195,697	-				-1.3
4,195,699	+				-0.6
4,195,699	+				-0.6
4,195,699	+				-0.7
4,195,699	+				+0.4
4,195,699	+				-0.4
4,195,700	-				-1.0
4,195,700	-				+0.7
4,195,700	-				+1.0
4,195,705	+				-0.1
4,195,705	+				-0.4
4,195,706	-				-0.2
4,195,713	+				-2.0
4,195,713	+				+0.3
4,195,713	+				-1.7
4,195,714	-				-0.4
4,195,722	+				-1.4
4,195,722	+				-3.1
4,195,722	+				-0.1
4,195,722	+				-1.1
4,195,722	+				+0.2
4,195,722	+				-1.9
4,195,722	+				+1.2
4,195,723	-				+0.3
4,195,723	-				-0.0
4,195,723	-				-1.7
4,195,723	-				-0.1
4,195,726	+		Sama_3560	0.10	-0.6
4,195,726	+		Sama_3560	0.10	-0.2
4,195,726	+		Sama_3560	0.10	+0.7
4,195,726	+		Sama_3560	0.10	-1.4
4,195,726	+		Sama_3560	0.10	+1.1
4,195,726	+		Sama_3560	0.10	-0.4
4,195,726	+		Sama_3560	0.10	+1.1
4,195,726	+		Sama_3560	0.10	-1.3
4,195,726	+		Sama_3560	0.10	-1.0
4,195,726	+		Sama_3560	0.10	+2.7
4,195,726	+		Sama_3560	0.10	+1.7
4,195,726	+		Sama_3560	0.10	-1.1
4,195,726	+		Sama_3560	0.10	-1.0
4,195,726	+		Sama_3560	0.10	+0.4
4,195,726	+		Sama_3560	0.10	+0.7
4,195,726	+		Sama_3560	0.10	-0.4
4,195,726	+		Sama_3560	0.10	-1.3
4,195,726	+		Sama_3560	0.10	+0.4
4,195,726	+		Sama_3560	0.10	+2.1
4,195,726	+		Sama_3560	0.10	-0.1
4,195,727	-		Sama_3560	0.10	-0.6
4,195,727	-		Sama_3560	0.10	-1.3
4,195,727	-		Sama_3560	0.10	+0.4
4,195,727	-		Sama_3560	0.10	+1.4
4,195,727	-		Sama_3560	0.10	+0.3
4,195,727	-		Sama_3560	0.10	+0.2
4,195,727	-		Sama_3560	0.10	-0.2
4,195,727	-		Sama_3560	0.10	-1.3
4,195,727	-		Sama_3560	0.10	+0.9
4,195,748	+		Sama_3560	0.14	-0.2
4,195,748	+		Sama_3560	0.14	-0.7
4,195,749	-		Sama_3560	0.14	-0.7
4,195,749	-		Sama_3560	0.14	+0.9
4,195,773	-		Sama_3560	0.18	+0.3
4,195,773	-		Sama_3560	0.18	-0.9
4,195,773	-		Sama_3560	0.18	-1.9
4,195,787	+		Sama_3560	0.21	+0.2
4,195,788	-		Sama_3560	0.21	-0.8
4,195,815	-		Sama_3560	0.26	+0.0
4,195,825	+		Sama_3560	0.28	+0.9
4,195,826	-		Sama_3560	0.28	+0.9
4,195,839	-		Sama_3560	0.30	+0.1
4,195,839	-		Sama_3560	0.30	-0.3
4,195,902	+		Sama_3560	0.41	-0.9
4,195,903	-		Sama_3560	0.41	-1.8
4,195,927	+		Sama_3560	0.45	-1.3
4,195,928	-		Sama_3560	0.46	-1.2
4,195,928	-		Sama_3560	0.46	-0.2
4,195,957	+		Sama_3560	0.51	-0.4
4,195,998	+		Sama_3560	0.58	-0.4
4,195,998	+		Sama_3560	0.58	-1.3
4,196,046	+		Sama_3560	0.66	-0.1
4,196,046	+		Sama_3560	0.66	-0.4
4,196,046	+		Sama_3560	0.66	-0.9
4,196,046	+		Sama_3560	0.66	-0.6
4,196,046	+		Sama_3560	0.66	+0.6
4,196,047	-		Sama_3560	0.66	+1.4
4,196,047	-		Sama_3560	0.66	-0.9
4,196,047	-		Sama_3560	0.66	+0.3
4,196,047	-		Sama_3560	0.66	-1.3
4,196,047	-		Sama_3560	0.66	-0.5
4,196,047	-		Sama_3560	0.66	+0.4
4,196,047	-		Sama_3560	0.66	-0.8
4,196,047	-		Sama_3560	0.66	+1.1
4,196,047	-		Sama_3560	0.66	+0.5
4,196,047	-		Sama_3560	0.66	+0.1
4,196,088	+		Sama_3560	0.74	+0.9
4,196,088	+		Sama_3560	0.74	-0.9
4,196,213	-				-0.5
4,196,226	+				-1.1
4,196,235	+				-1.9
4,196,242	-				+0.1
4,196,304	+				-1.0
4,196,304	+				-1.1
4,196,305	-				+1.1
4,196,341	+				-0.5
4,196,341	+				+1.0
4,196,344	+		Sama_3561	0.10	-1.1
4,196,344	+		Sama_3561	0.10	-1.5
4,196,344	+		Sama_3561	0.10	-0.0
4,196,344	+		Sama_3561	0.10	-0.9
4,196,345	-		Sama_3561	0.10	-0.1
4,196,345	-		Sama_3561	0.10	+0.2
4,196,345	-		Sama_3561	0.10	-1.2
4,196,373	+		Sama_3561	0.13	-0.1
4,196,425	+		Sama_3561	0.18	-0.0
4,196,425	+		Sama_3561	0.18	+0.2
4,196,425	+		Sama_3561	0.18	-0.2
4,196,425	+		Sama_3561	0.18	-1.5
4,196,425	+		Sama_3561	0.18	+0.5
4,196,425	+		Sama_3561	0.18	-1.9
4,196,425	+		Sama_3561	0.18	-0.5
4,196,426	-		Sama_3561	0.18	+1.4
4,196,426	-		Sama_3561	0.18	-0.2
4,196,426	-		Sama_3561	0.18	-0.3
4,196,426	-		Sama_3561	0.18	+1.1
4,196,426	-		Sama_3561	0.18	+0.9
4,196,426	-		Sama_3561	0.18	+0.1
4,196,426	-		Sama_3561	0.18	+1.4
4,196,441	+		Sama_3561	0.20	-1.2
4,196,441	+		Sama_3561	0.20	+0.2
4,196,441	+		Sama_3561	0.20	-1.6
4,196,442	-		Sama_3561	0.20	-1.0
4,196,477	+		Sama_3561	0.23	-1.6
4,196,478	-		Sama_3561	0.23	-0.5
4,196,538	-		Sama_3561	0.29	-1.1
4,196,572	+		Sama_3561	0.32	+0.2
4,196,572	+		Sama_3561	0.32	+1.7
4,196,572	+		Sama_3561	0.32	-1.3
4,196,572	+		Sama_3561	0.32	+0.2
4,196,572	+		Sama_3561	0.32	-1.0
4,196,575	-		Sama_3561	0.33	+0.5
4,196,575	-		Sama_3561	0.33	-0.1
4,196,575	-		Sama_3561	0.33	-1.4
4,196,575	-		Sama_3561	0.33	+0.8
4,196,575	-		Sama_3561	0.33	-0.8
4,196,575	-		Sama_3561	0.33	+0.4
4,196,585	+		Sama_3561	0.34	-1.1
4,196,586	-		Sama_3561	0.34	-0.3
4,196,600	-		Sama_3561	0.35	-0.0
4,196,609	+		Sama_3561	0.36	+0.1
4,196,609	+		Sama_3561	0.36	-0.5
4,196,610	-		Sama_3561	0.36	+0.6
4,196,610	-		Sama_3561	0.36	-0.9
4,196,610	-		Sama_3561	0.36	+0.9
4,196,667	+		Sama_3561	0.42	-0.1
4,196,667	+		Sama_3561	0.42	-0.1
4,196,667	+		Sama_3561	0.42	-0.7
4,196,667	+		Sama_3561	0.42	-1.6
4,196,667	+		Sama_3561	0.42	-0.3
4,196,668	-		Sama_3561	0.42	-0.9
4,196,668	-		Sama_3561	0.42	-0.7
4,196,668	-		Sama_3561	0.42	+1.1
4,196,668	-		Sama_3561	0.42	-1.1
4,196,668	-		Sama_3561	0.42	-1.2
4,196,668	-		Sama_3561	0.42	-1.1
4,196,673	+		Sama_3561	0.42	+0.2
4,196,698	+		Sama_3561	0.45	+0.5
4,196,698	+		Sama_3561	0.45	+0.5
4,196,698	+		Sama_3561	0.45	+1.6
4,196,698	+		Sama_3561	0.45	-2.0
4,196,698	+		Sama_3561	0.45	+0.4
4,196,698	+		Sama_3561	0.45	-0.7
4,196,698	+		Sama_3561	0.45	-2.2
4,196,698	+		Sama_3561	0.45	-0.7
4,196,737	+		Sama_3561	0.49	+1.0
4,196,738	-		Sama_3561	0.49	+1.4
4,196,738	-		Sama_3561	0.49	-2.4
4,196,738	-		Sama_3561	0.49	-0.7
4,196,738	-		Sama_3561	0.49	-0.2
4,196,799	+		Sama_3561	0.55	+0.7
4,196,800	-		Sama_3561	0.55	-2.0
4,196,800	-		Sama_3561	0.55	+0.2
4,196,831	+		Sama_3561	0.58	-0.3
4,196,831	+		Sama_3561	0.58	-0.8
4,196,831	+		Sama_3561	0.58	-0.5
4,196,832	-		Sama_3561	0.58	+1.7
4,196,832	-		Sama_3561	0.58	+1.0
4,196,832	-		Sama_3561	0.58	-0.6
4,196,832	-		Sama_3561	0.58	-0.4
4,196,835	+		Sama_3561	0.58	-1.0
4,196,835	+		Sama_3561	0.58	-0.0
4,196,835	+		Sama_3561	0.58	-0.6
4,196,835	+		Sama_3561	0.58	-2.5
4,196,836	-		Sama_3561	0.58	+1.5
4,196,836	-		Sama_3561	0.58	+0.1
4,196,836	-		Sama_3561	0.58	-0.2
4,197,031	-		Sama_3561	0.78	-2.0
4,197,031	-		Sama_3561	0.78	-0.6
4,197,042	+		Sama_3561	0.79	-1.0
4,197,042	+		Sama_3561	0.79	-0.6
4,197,043	-		Sama_3561	0.79	-1.9
4,197,043	-		Sama_3561	0.79	-0.5
4,197,105	+		Sama_3561	0.85	+1.7
4,197,105	+		Sama_3561	0.85	-1.3
4,197,105	+		Sama_3561	0.85	+0.4
4,197,105	+		Sama_3561	0.85	-1.1
4,197,105	+		Sama_3561	0.85	-0.9
4,197,106	-		Sama_3561	0.85	+0.3
4,197,106	-		Sama_3561	0.85	-0.7
4,197,106	-		Sama_3561	0.85	+2.1
4,197,106	-		Sama_3561	0.85	-0.2
4,197,106	-		Sama_3561	0.85	-0.8
4,197,113	+		Sama_3561	0.86	+1.0
4,197,113	+		Sama_3561	0.86	-1.5
4,197,113	+		Sama_3561	0.86	-0.6
4,197,113	+		Sama_3561	0.86	-1.3
4,197,114	-		Sama_3561	0.86	-1.0
4,197,147	+		Sama_3561	0.89	-0.9
4,197,147	+		Sama_3561	0.89	-1.7
4,197,216	+				+0.6
4,197,217	-				-2.4
4,197,221	+				-0.9
4,197,221	+				+0.1
4,197,221	+				+1.2
4,197,221	+				-0.7
4,197,221	+				-2.0
4,197,227	+				-0.3
4,197,227	+				+0.3
4,197,227	+				-1.3
4,197,227	+				-0.2
4,197,228	-				-0.1
4,197,228	-				+0.2
4,197,228	-				+0.9
4,197,228	-				+0.9
4,197,228	-				+0.5
4,197,231	+				-0.6
4,197,232	-				+1.4
4,197,232	-				+2.1
4,197,232	-				-1.7
4,197,232	-				-1.9
4,197,245	-				-0.2
4,197,245	-				-1.0
4,197,256	+				+1.3
4,197,256	+				-0.1
4,197,256	+				-0.8
4,197,256	+				-0.1
4,197,256	+				-0.7
4,197,256	+				-1.3
4,197,257	-				-1.3
4,197,257	-				-0.6
4,197,257	-				+0.4
4,197,257	-				+0.8
4,197,257	-				-1.1
4,197,257	-				-0.2
4,197,292	+				-1.1
4,197,293	-				-0.3
4,197,293	-				-0.2
4,197,293	-				-0.7
4,197,300	-				+0.1
4,197,329	+		Sama_3562	0.10	-1.8
4,197,330	-		Sama_3562	0.11	-1.7
4,197,330	-		Sama_3562	0.11	-0.8
4,197,406	+		Sama_3562	0.22	-1.8
4,197,406	+		Sama_3562	0.22	-0.2
4,197,406	+		Sama_3562	0.22	-0.9
4,197,406	+		Sama_3562	0.22	-2.2
4,197,406	+		Sama_3562	0.22	-0.6
4,197,406	+		Sama_3562	0.22	+0.2
4,197,406	+		Sama_3562	0.22	-0.9
4,197,407	-		Sama_3562	0.22	-0.1
4,197,407	-		Sama_3562	0.22	-0.3
4,197,407	-		Sama_3562	0.22	+1.7
4,197,407	-		Sama_3562	0.22	-0.9
4,197,407	-		Sama_3562	0.22	+0.3
4,197,407	-		Sama_3562	0.22	+0.2
4,197,407	-		Sama_3562	0.22	-0.5
4,197,407	-		Sama_3562	0.22	-0.4
4,197,407	-		Sama_3562	0.22	+1.4
4,197,407	-		Sama_3562	0.22	+0.1
4,197,407	-		Sama_3562	0.22	-1.0
4,197,408	+		Sama_3562	0.22	-1.2
4,197,408	+		Sama_3562	0.22	+0.3
4,197,408	+		Sama_3562	0.22	-1.7
4,197,408	+		Sama_3562	0.22	-0.4
4,197,408	+		Sama_3562	0.22	-0.5
4,197,408	+		Sama_3562	0.22	-0.4
4,197,408	+		Sama_3562	0.22	-1.2
4,197,409	-		Sama_3562	0.22	-0.5
4,197,409	-		Sama_3562	0.22	-1.7
4,197,409	-		Sama_3562	0.22	-1.2
4,197,409	-		Sama_3562	0.22	-1.1
4,197,409	-		Sama_3562	0.22	+0.7
4,197,409	-		Sama_3562	0.22	-0.2
4,197,409	-		Sama_3562	0.22	+1.2
4,197,409	-		Sama_3562	0.22	-1.9
4,197,409	-		Sama_3562	0.22	-1.1
4,197,409	-		Sama_3562	0.22	-1.4
4,197,409	-		Sama_3562	0.22	-0.8
4,197,414	+		Sama_3562	0.23	-1.2
4,197,414	+		Sama_3562	0.23	-2.1
4,197,414	+		Sama_3562	0.23	-0.1
4,197,414	+		Sama_3562	0.23	+0.0
4,197,414	+		Sama_3562	0.23	-0.1
4,197,414	+		Sama_3562	0.23	+0.2
4,197,414	+		Sama_3562	0.23	+1.1
4,197,415	-		Sama_3562	0.23	-1.2
4,197,415	-		Sama_3562	0.23	-0.6
4,197,415	-		Sama_3562	0.23	-0.9
4,197,415	-		Sama_3562	0.23	-1.1
4,197,415	-		Sama_3562	0.23	-1.4
4,197,415	-		Sama_3562	0.23	-1.9
4,197,415	-		Sama_3562	0.23	-0.7
4,197,415	-		Sama_3562	0.23	-1.2
4,197,471	+		Sama_3562	0.31	-0.9
4,197,471	+		Sama_3562	0.31	-0.8
4,197,471	+		Sama_3562	0.31	-0.4
4,197,472	-		Sama_3562	0.31	-3.0
4,197,472	-		Sama_3562	0.31	-1.8
4,197,495	+		Sama_3562	0.35	-1.0
4,197,496	-		Sama_3562	0.35	-0.8
4,197,496	-		Sama_3562	0.35	-1.2
4,197,496	-		Sama_3562	0.35	-0.1
4,197,521	+		Sama_3562	0.39	-0.7
4,197,521	+		Sama_3562	0.39	-1.1
4,197,521	+		Sama_3562	0.39	-1.5
4,197,521	+		Sama_3562	0.39	+2.5
4,197,522	-		Sama_3562	0.39	-1.2
4,197,568	+		Sama_3562	0.46	+0.1
4,197,569	-		Sama_3562	0.46	-0.4
4,197,585	+		Sama_3562	0.48	-1.0
4,197,585	+		Sama_3562	0.48	-0.1
4,197,585	+		Sama_3562	0.48	-0.4
4,197,608	-		Sama_3562	0.51	-0.7
4,197,608	-		Sama_3562	0.51	-1.0
4,197,639	-		Sama_3562	0.56	-0.0
4,197,719	+		Sama_3562	0.68	-0.9
4,197,719	+		Sama_3562	0.68	-0.8
4,197,720	-		Sama_3562	0.68	-3.0
4,197,720	-		Sama_3562	0.68	-1.8
4,197,743	+		Sama_3562	0.71	-2.3
4,197,743	+		Sama_3562	0.71	-0.6
4,197,743	+		Sama_3562	0.71	+0.5
4,197,743	+		Sama_3562	0.71	-0.5
4,197,743	+		Sama_3562	0.71	+0.5
4,197,743	+		Sama_3562	0.71	+0.4
4,197,744	-		Sama_3562	0.71	-0.6
4,197,763	-		Sama_3562	0.74	-1.1
4,197,799	+		Sama_3562	0.79	-1.1
4,197,799	+		Sama_3562	0.79	+0.8
4,197,799	+		Sama_3562	0.79	-0.8
4,197,800	-		Sama_3562	0.80	+1.1
4,197,800	-		Sama_3562	0.80	-0.0
4,197,819	+		Sama_3562	0.82	-1.4
4,197,819	+		Sama_3562	0.82	-0.9
4,197,820	-		Sama_3562	0.83	-1.1
4,197,820	-		Sama_3562	0.83	+0.7
4,197,821	+		Sama_3562	0.83	-0.4
4,197,822	-		Sama_3562	0.83	+0.2
4,197,834	-		Sama_3562	0.85	-1.4
4,197,849	+		Sama_3562	0.87	-1.4
4,197,849	+		Sama_3562	0.87	-0.6
4,197,849	+		Sama_3562	0.87	-0.2
4,197,849	+		Sama_3562	0.87	-1.1
4,197,850	-		Sama_3562	0.87	-0.6
4,197,850	-		Sama_3562	0.87	+1.7
4,197,857	+		Sama_3562	0.88	-0.3
4,197,886	-				-0.8
4,197,889	+				-1.4
4,197,889	+				+0.6
4,197,889	+				-0.1
4,197,889	+				+1.0
4,197,889	+				+0.4
4,197,889	+				-0.2
4,197,889	+				+0.7
4,197,890	-				-1.6
4,197,890	-				-1.3
4,197,890	-				-1.9
4,197,890	-				-2.4
4,197,890	-				+0.2
4,197,890	-				-0.8
4,197,890	-				-0.8
4,197,890	-				-0.3
4,197,890	-				+0.2
4,197,890	-				-0.2
4,197,890	-				-0.5
4,197,890	-				-0.0
4,197,890	-				+0.1
4,197,890	-				-0.1
4,197,890	-				+0.1
4,197,890	-				+0.5
4,197,890	-				+0.2
4,197,890	-				-0.3
4,197,890	-				-2.0
4,197,902	+				-0.6
4,197,902	+				+0.4
4,197,902	+				-0.0
4,197,902	+				+0.2
4,197,902	+				-1.4
4,197,903	-				-0.1
4,197,903	-				-0.6
4,197,903	-				-0.0
4,197,903	-				-0.8
4,197,919	-				-0.6
4,197,972	+				-0.1
4,197,972	+				-0.2
4,197,972	+				-0.3
4,197,972	+				-0.7
4,197,973	-				-1.2
4,197,973	-				-0.1
4,197,973	-				-0.3
4,198,012	+				-1.4
4,198,012	+				-0.6
4,198,012	+				+0.2
4,198,067	+				-2.3
4,198,078	+				-1.0
4,198,078	+				-1.4
4,198,079	-				-0.2
4,198,079	-				-0.4
4,198,079	-				+0.6
4,198,111	+				-1.0
4,198,112	-				-1.3
4,198,112	-				-1.6
4,198,112	-				-1.6
4,198,131	+				-1.6
4,198,132	-				-0.7
4,198,158	-		Sama_3563	0.13	-0.3