Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2468 and Dshi_2469 are separated by 9 nucleotides Dshi_2469 and Dshi_2470 are separated by 12 nucleotides
Dshi_2468: Dshi_2468 - hypothetical protein (RefSeq), at 2,619,421 to 2,620,425
_2468
Dshi_2469: Dshi_2469 - phospho-N-acetylmuramoyl-pentapeptide-transferase (RefSeq), at 2,620,435 to 2,621,520
_2469
Dshi_2470: Dshi_2470 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase (RefSeq), at 2,621,533 to 2,622,972
_2470
Position (kb)
2620
2621
2622 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2619.447 kb on - strand at 2619.487 kb on + strand at 2619.487 kb on + strand at 2619.490 kb on - strand at 2619.502 kb on + strand at 2619.502 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.534 kb on - strand, within Dshi_2468 at 2619.537 kb on - strand, within Dshi_2468 at 2619.552 kb on + strand, within Dshi_2468 at 2619.555 kb on - strand, within Dshi_2468 at 2619.562 kb on + strand, within Dshi_2468 at 2619.572 kb on - strand, within Dshi_2468 at 2619.621 kb on - strand, within Dshi_2468 at 2619.631 kb on + strand, within Dshi_2468 at 2619.634 kb on + strand, within Dshi_2468 at 2619.650 kb on + strand, within Dshi_2468 at 2619.724 kb on + strand, within Dshi_2468 at 2619.757 kb on - strand, within Dshi_2468 at 2619.796 kb on - strand, within Dshi_2468 at 2619.846 kb on - strand, within Dshi_2468 at 2619.846 kb on - strand, within Dshi_2468 at 2619.897 kb on - strand, within Dshi_2468 at 2619.908 kb on + strand, within Dshi_2468 at 2619.993 kb on - strand, within Dshi_2468 at 2620.047 kb on + strand, within Dshi_2468 at 2620.055 kb on - strand, within Dshi_2468 at 2620.131 kb on + strand, within Dshi_2468 at 2620.171 kb on - strand, within Dshi_2468 at 2620.173 kb on + strand, within Dshi_2468 at 2620.181 kb on - strand, within Dshi_2468 at 2620.292 kb on - strand, within Dshi_2468 at 2620.301 kb on - strand, within Dshi_2468 at 2620.338 kb on + strand at 2620.343 kb on + strand at 2620.351 kb on - strand at 2620.418 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,619,447 - -0.5 2,619,487 + -1.4 2,619,487 + +1.7 2,619,490 - -1.0 2,619,502 + +0.1 2,619,502 + +0.5 2,619,512 + -0.9 2,619,512 + -0.4 2,619,512 + +0.7 2,619,512 + -0.3 2,619,512 + +1.1 2,619,512 + +0.3 2,619,512 + -0.1 2,619,512 + -0.8 2,619,512 + +1.8 2,619,512 + -1.0 2,619,512 + +0.6 2,619,512 + +0.2 2,619,520 - +0.3 2,619,520 - +0.3 2,619,520 - -0.0 2,619,520 - -0.5 2,619,520 - +1.0 2,619,520 - +0.2 2,619,520 - -0.2 2,619,520 - -0.2 2,619,520 - +0.6 2,619,520 - -0.3 2,619,520 - -0.2 2,619,520 - -1.4 2,619,520 - +0.2 2,619,520 - +0.3 2,619,534 - Dshi_2468 0.11 -0.1 2,619,537 - Dshi_2468 0.12 -0.6 2,619,552 + Dshi_2468 0.13 -0.6 2,619,555 - Dshi_2468 0.13 -0.7 2,619,562 + Dshi_2468 0.14 +0.1 2,619,572 - Dshi_2468 0.15 -1.0 2,619,621 - Dshi_2468 0.20 +1.6 2,619,631 + Dshi_2468 0.21 +0.5 2,619,634 + Dshi_2468 0.21 -1.8 2,619,650 + Dshi_2468 0.23 -0.6 2,619,724 + Dshi_2468 0.30 -0.5 2,619,757 - Dshi_2468 0.33 -2.4 2,619,796 - Dshi_2468 0.37 -0.8 2,619,846 - Dshi_2468 0.42 -0.8 2,619,846 - Dshi_2468 0.42 +0.0 2,619,897 - Dshi_2468 0.47 -0.5 2,619,908 + Dshi_2468 0.48 -0.5 2,619,993 - Dshi_2468 0.57 -0.3 2,620,047 + Dshi_2468 0.62 -0.8 2,620,055 - Dshi_2468 0.63 -0.1 2,620,131 + Dshi_2468 0.71 -0.6 2,620,171 - Dshi_2468 0.75 -2.0 2,620,173 + Dshi_2468 0.75 +0.7 2,620,181 - Dshi_2468 0.76 +0.6 2,620,292 - Dshi_2468 0.87 +0.1 2,620,301 - Dshi_2468 0.88 -0.5 2,620,338 + +0.3 2,620,343 + -0.4 2,620,351 - +0.1 2,620,418 - +0.1
Or see this region's nucleotide sequence