Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1182
Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,215,949 | + | Dshi_1181 | 0.43 | +0.5 | |
1,215,966 | - | Dshi_1181 | 0.45 | -0.8 | |
1,215,977 | - | Dshi_1181 | 0.45 | +0.0 | |
1,216,025 | - | Dshi_1181 | 0.49 | +1.0 | |
1,216,054 | + | Dshi_1181 | 0.51 | -0.2 | |
1,216,198 | + | Dshi_1181 | 0.61 | -0.1 | |
1,216,201 | - | Dshi_1181 | 0.61 | +0.8 | |
1,216,340 | - | Dshi_1181 | 0.71 | -1.6 | |
1,216,397 | - | Dshi_1181 | 0.75 | +0.0 | |
1,216,465 | - | Dshi_1181 | 0.80 | -0.8 | |
1,216,525 | - | Dshi_1181 | 0.85 | +0.5 | |
1,216,618 | + | -0.1 | |||
1,216,886 | + | +0.5 | |||
1,217,044 | + | +0.2 | |||
1,217,206 | + | Dshi_1182 | 0.22 | +1.2 | |
1,217,422 | + | Dshi_1182 | 0.40 | +0.4 | |
1,217,573 | - | Dshi_1182 | 0.52 | +0.9 | |
1,217,732 | - | Dshi_1182 | 0.65 | +0.6 | |
1,217,846 | - | Dshi_1182 | 0.74 | +0.6 | |
1,217,974 | - | Dshi_1182 | 0.85 | +0.3 | |
1,218,038 | - | +0.2 | |||
1,218,084 | - | +0.6 |
Or see this region's nucleotide sequence