Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0655

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
655,993	+		Dshi_0653	0.88	-0.3
656,273	-		Dshi_0654	0.11	+0.7
656,273	-		Dshi_0654	0.11	+0.3
656,564	-		Dshi_0654	0.67	-0.5
656,588	+		Dshi_0654	0.71	-0.2
656,691	+				+0.2
656,776	-				+2.6
656,861	+				+1.4
656,869	-				+2.4
656,930	+				+1.5
656,933	-				+3.6
656,945	-				+3.1
656,973	+				+2.9
656,996	+				+2.6
657,044	+				+2.0
657,059	+				+3.0
657,067	-				+2.8
657,096	+				+2.3
657,096	+				+2.9
657,190	-		Dshi_0655	0.11	+2.6
657,199	+		Dshi_0655	0.11	+2.8
657,262	+		Dshi_0655	0.14	+2.2
657,268	-		Dshi_0655	0.15	+2.6
657,270	-		Dshi_0655	0.15	+2.4
657,270	-		Dshi_0655	0.15	+2.6
657,379	-		Dshi_0655	0.21	+1.9
657,388	+		Dshi_0655	0.21	+3.3
657,388	+		Dshi_0655	0.21	+0.7
657,396	-		Dshi_0655	0.21	+2.6
657,396	-		Dshi_0655	0.21	+1.6
657,403	-		Dshi_0655	0.22	+2.6
657,488	-		Dshi_0655	0.26	+1.5
657,548	+		Dshi_0655	0.29	+2.3
657,634	+		Dshi_0655	0.34	+2.1
657,677	-		Dshi_0655	0.36	+2.9
657,734	-		Dshi_0655	0.39	+2.5
657,767	-		Dshi_0655	0.41	+2.1
657,793	-		Dshi_0655	0.42	+3.1
657,830	-		Dshi_0655	0.44	+2.2
657,855	+		Dshi_0655	0.46	+2.9
657,855	+		Dshi_0655	0.46	+2.3
657,863	-		Dshi_0655	0.46	+3.0
657,863	-		Dshi_0655	0.46	+2.7
657,869	+		Dshi_0655	0.46	+3.2
657,877	-		Dshi_0655	0.47	+2.7
657,900	+		Dshi_0655	0.48	+2.5
657,900	+		Dshi_0655	0.48	+2.4
657,900	+		Dshi_0655	0.48	+2.3
657,921	-		Dshi_0655	0.49	+2.9
657,942	-		Dshi_0655	0.50	+2.2
657,979	-		Dshi_0655	0.52	+2.8
657,985	+		Dshi_0655	0.52	+2.6
657,985	+		Dshi_0655	0.52	+2.9
657,985	+		Dshi_0655	0.52	+2.5
657,986	-		Dshi_0655	0.52	+4.1
657,990	+		Dshi_0655	0.53	+3.4
657,990	+		Dshi_0655	0.53	+0.5
657,993	-		Dshi_0655	0.53	+1.8
657,998	-		Dshi_0655	0.53	+2.0
658,006	-		Dshi_0655	0.53	+3.0
658,007	-		Dshi_0655	0.54	+2.7
658,011	-		Dshi_0655	0.54	+3.0
658,047	-		Dshi_0655	0.56	+2.6
658,053	-		Dshi_0655	0.56	+3.7
658,053	-		Dshi_0655	0.56	+2.8
658,099	+		Dshi_0655	0.58	+1.7
658,118	+		Dshi_0655	0.59	+1.4
658,130	+		Dshi_0655	0.60	+2.8
658,138	-		Dshi_0655	0.60	+1.8
658,209	-		Dshi_0655	0.64	+2.8
658,234	-		Dshi_0655	0.65	+2.5
658,234	-		Dshi_0655	0.65	+2.7
658,474	+		Dshi_0655	0.78	+2.2
658,476	+		Dshi_0655	0.78	+2.7
658,551	-		Dshi_0655	0.82	+2.6
658,552	-		Dshi_0655	0.82	+1.9
658,598	+		Dshi_0655	0.85	+2.9
658,605	-		Dshi_0655	0.85	+1.6
658,647	+		Dshi_0655	0.87	+0.6
658,655	-		Dshi_0655	0.88	+2.8
658,681	-		Dshi_0655	0.89	+2.4
658,702	+				+2.3
658,717	-				+1.9
658,757	-				+2.4
658,768	-				+2.3
658,783	-				+2.0
658,811	+				+2.5
658,818	-				+2.3
658,819	-				+2.2
658,819	-				+2.1
658,824	-				+2.3
658,857	+				+1.9
658,857	+				+2.0
658,864	+				+1.4
658,865	-				+3.3
658,910	-				+1.6
658,927	+				+2.4
658,932	+				+2.0
659,025	-		Dshi_0656	0.12	+2.3
659,087	+		Dshi_0656	0.17	+2.3
659,095	-		Dshi_0656	0.18	+1.6
659,123	+		Dshi_0656	0.21	+2.1
659,124	+		Dshi_0656	0.21	+2.6
659,132	-		Dshi_0656	0.22	+1.6
659,132	-		Dshi_0656	0.22	+2.1
659,254	+		Dshi_0656	0.33	+3.1
659,310	+		Dshi_0656	0.38	+2.7
659,310	+		Dshi_0656	0.38	+3.2
659,331	+		Dshi_0656	0.40	+1.8
659,343	-		Dshi_0656	0.41	+2.4
659,369	+		Dshi_0656	0.43	+2.2
659,400	+		Dshi_0656	0.46	+2.2
659,486	+		Dshi_0656	0.54	+2.2
659,593	-		Dshi_0656	0.64	+1.8
659,608	-		Dshi_0656	0.65	+1.7
659,623	-		Dshi_0656	0.66	+1.7
659,684	+		Dshi_0656	0.72	+0.6
659,711	+		Dshi_0656	0.74	+2.1
659,711	+		Dshi_0656	0.74	+2.3
659,778	-		Dshi_0656	0.80	+2.4
659,820	+		Dshi_0656	0.84	+2.8
659,820	+		Dshi_0656	0.84	+2.0
659,847	-		Dshi_0656	0.87	+3.0