Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36180

Experiment: L-Glutamic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic (C)
3,786,736	+		PGA1_c36160	0.86	-4.9
3,786,741	+		PGA1_c36160	0.87	-2.7
3,786,817	-				-2.7
3,786,823	+				-4.6
3,786,823	+				-2.5
3,786,823	+				-3.1
3,786,831	-				-3.9
3,786,831	-				-3.1
3,786,831	-				-1.6
3,786,831	-				-2.4
3,786,831	-				-3.4
3,786,837	+				-3.4
3,786,837	+				+1.4
3,786,837	+				+0.2
3,786,837	+				+0.6
3,786,837	+				+0.1
3,786,837	+				+0.7
3,786,837	+				-0.0
3,786,838	-				+1.1
3,786,843	-				-2.7
3,786,845	-				-0.4
3,786,845	-				-0.2
3,786,845	-				-1.0
3,786,864	+				-0.4
3,786,864	+				+0.3
3,786,864	+				-2.5
3,786,872	-				+0.2
3,786,883	+				-0.8
3,786,910	-				+0.9
3,786,910	-				-0.6
3,786,957	+		PGA1_c36170	0.11	+0.4
3,786,960	-		PGA1_c36170	0.12	+0.6
3,786,960	-		PGA1_c36170	0.12	-0.5
3,786,960	-		PGA1_c36170	0.12	-0.7
3,786,965	-		PGA1_c36170	0.13	-1.4
3,786,965	-		PGA1_c36170	0.13	+0.0
3,787,006	-		PGA1_c36170	0.18	-1.3
3,787,080	+		PGA1_c36170	0.28	-1.0
3,787,100	+		PGA1_c36170	0.30	-2.2
3,787,100	+		PGA1_c36170	0.30	-0.6
3,787,110	+		PGA1_c36170	0.32	-2.8
3,787,135	-		PGA1_c36170	0.35	-0.5
3,787,136	-		PGA1_c36170	0.35	-0.3
3,787,148	+		PGA1_c36170	0.37	+1.9
3,787,148	+		PGA1_c36170	0.37	+0.4
3,787,148	+		PGA1_c36170	0.37	+0.2
3,787,148	+		PGA1_c36170	0.37	-1.1
3,787,148	+		PGA1_c36170	0.37	-0.3
3,787,156	-		PGA1_c36170	0.38	-0.2
3,787,241	+		PGA1_c36170	0.49	-0.6
3,787,241	+		PGA1_c36170	0.49	+1.5
3,787,241	+		PGA1_c36170	0.49	+0.9
3,787,246	+		PGA1_c36170	0.50	+1.2
3,787,249	-		PGA1_c36170	0.50	+0.8
3,787,249	-		PGA1_c36170	0.50	-0.3
3,787,262	+		PGA1_c36170	0.52	+1.7
3,787,291	+		PGA1_c36170	0.55	+1.2
3,787,309	-		PGA1_c36170	0.58	+1.0
3,787,345	-		PGA1_c36170	0.63	-1.5
3,787,396	+		PGA1_c36170	0.69	-0.7
3,787,470	+		PGA1_c36170	0.79	-0.3
3,787,478	-		PGA1_c36170	0.80	-0.3
3,787,478	-		PGA1_c36170	0.80	+0.6
3,787,480	+		PGA1_c36170	0.80	-0.4
3,787,521	+		PGA1_c36170	0.86	-1.6
3,787,529	+		PGA1_c36170	0.87	-2.6
3,787,542	-		PGA1_c36170	0.89	-3.3
3,787,593	-				-2.2
3,787,617	+				-2.1
3,787,650	+				-0.0
3,787,711	+				-0.5
3,787,719	-				-1.8
3,787,719	-				-1.1
3,787,719	-				-0.1
3,787,732	-				+0.3
3,787,746	-				+1.0
3,787,746	-				+1.0
3,787,746	-				-0.1
3,787,767	-		PGA1_c36180	0.12	-1.8
3,787,767	-		PGA1_c36180	0.12	+1.1
3,787,767	-		PGA1_c36180	0.12	+0.5
3,787,767	-		PGA1_c36180	0.12	-0.4
3,787,792	+		PGA1_c36180	0.20	+0.5
3,787,828	+		PGA1_c36180	0.31	+1.4
3,787,870	+		PGA1_c36180	0.45	+0.1
3,787,870	+		PGA1_c36180	0.45	-0.4
3,787,877	+		PGA1_c36180	0.47	+1.5
3,787,895	-		PGA1_c36180	0.52	+1.7
3,787,895	-		PGA1_c36180	0.52	+1.5
3,787,921	-		PGA1_c36180	0.60	-0.2
3,787,950	+		PGA1_c36180	0.69	+0.9
3,787,950	+		PGA1_c36180	0.69	+0.5
3,787,958	-		PGA1_c36180	0.72	-0.4
3,787,958	-		PGA1_c36180	0.72	-1.1
3,788,004	+		PGA1_c36180	0.86	+1.0
3,788,004	+		PGA1_c36180	0.86	+0.3
3,788,004	+		PGA1_c36180	0.86	+0.3
3,788,012	-		PGA1_c36180	0.89	-0.9
3,788,012	-		PGA1_c36180	0.89	+0.0
3,788,012	-		PGA1_c36180	0.89	-0.0
3,788,012	-		PGA1_c36180	0.89	+0.5
3,788,014	+		PGA1_c36180	0.89	+0.7
3,788,022	-				+0.3
3,788,045	+				+1.7
3,788,081	+				-2.1
3,788,081	+				+1.2
3,788,102	+		PGA1_c36190	0.14	+1.0
3,788,132	+		PGA1_c36190	0.21	+1.4
3,788,138	+		PGA1_c36190	0.22	+0.9
3,788,148	-		PGA1_c36190	0.24	-0.0
3,788,195	+		PGA1_c36190	0.35	+1.4
3,788,203	+		PGA1_c36190	0.37	-2.5
3,788,203	+		PGA1_c36190	0.37	+1.0
3,788,203	+		PGA1_c36190	0.37	-0.3
3,788,203	-		PGA1_c36190	0.37	+0.2
3,788,211	-		PGA1_c36190	0.39	-0.8
3,788,211	-		PGA1_c36190	0.39	+0.1
3,788,211	-		PGA1_c36190	0.39	+0.8
3,788,228	+		PGA1_c36190	0.43	-0.0
3,788,228	+		PGA1_c36190	0.43	+1.5
3,788,228	+		PGA1_c36190	0.43	+0.2
3,788,252	+		PGA1_c36190	0.48	+1.0
3,788,252	+		PGA1_c36190	0.48	-0.4
3,788,257	-		PGA1_c36190	0.50	-2.4
3,788,337	-		PGA1_c36190	0.68	-3.4
3,788,350	-		PGA1_c36190	0.71	-1.0
3,788,389	+		PGA1_c36190	0.80	+0.9
3,788,399	+		PGA1_c36190	0.83	+0.5
3,788,399	+		PGA1_c36190	0.83	-0.1
3,788,399	+		PGA1_c36190	0.83	+1.5
3,788,399	+		PGA1_c36190	0.83	-0.0
3,788,399	+		PGA1_c36190	0.83	+0.5
3,788,399	+		PGA1_c36190	0.83	+0.2
3,788,399	+		PGA1_c36190	0.83	+0.8
3,788,399	+		PGA1_c36190	0.83	-1.0
3,788,399	+		PGA1_c36190	0.83	+1.1
3,788,399	+		PGA1_c36190	0.83	+0.1
3,788,399	+		PGA1_c36190	0.83	+1.2
3,788,399	+		PGA1_c36190	0.83	+0.9
3,788,399	+		PGA1_c36190	0.83	-2.4
3,788,399	+		PGA1_c36190	0.83	+0.3
3,788,399	+		PGA1_c36190	0.83	+0.4
3,788,399	+		PGA1_c36190	0.83	-0.4
3,788,399	+		PGA1_c36190	0.83	+0.7
3,788,407	-		PGA1_c36190	0.85	+1.2
3,788,407	-		PGA1_c36190	0.85	-1.5
3,788,407	-		PGA1_c36190	0.85	+0.2
3,788,407	-		PGA1_c36190	0.85	+0.6
3,788,407	-		PGA1_c36190	0.85	-0.2
3,788,407	-		PGA1_c36190	0.85	-0.5
3,788,417	-		PGA1_c36190	0.87	-1.4
3,788,417	-		PGA1_c36190	0.87	-1.4
3,788,435	+				-0.9
3,788,445	+				-1.0
3,788,445	+				+0.7
3,788,485	-				-0.4
3,788,522	+				-0.7
3,788,527	+				+0.8
3,788,527	+				-1.4
3,788,530	-				-1.4
3,788,530	-				-0.8
3,788,532	+				+0.2
3,788,535	-				-0.1
3,788,576	+		PGA1_c36200	0.12	+0.9
3,788,583	+		PGA1_c36200	0.15	+0.7
3,788,585	+		PGA1_c36200	0.15	+1.1
3,788,585	+		PGA1_c36200	0.15	+0.6
3,788,585	+		PGA1_c36200	0.15	+0.8
3,788,595	+		PGA1_c36200	0.18	+0.5
3,788,602	+		PGA1_c36200	0.21	+2.7
3,788,613	-		PGA1_c36200	0.24	-0.9
3,788,659	+		PGA1_c36200	0.39	-0.5
3,788,677	+		PGA1_c36200	0.44	+0.5
3,788,677	+		PGA1_c36200	0.44	+0.3
3,788,677	+		PGA1_c36200	0.44	-0.4
3,788,677	+		PGA1_c36200	0.44	+0.5
3,788,685	-		PGA1_c36200	0.47	-0.5
3,788,685	-		PGA1_c36200	0.47	-0.2
3,788,687	+		PGA1_c36200	0.48	+0.7
3,788,715	-		PGA1_c36200	0.57	-0.4
3,788,817	+		PGA1_c36200	0.89	-0.4
3,788,820	+				+1.2
3,788,820	+				+1.4
3,788,820	+				+0.6
3,788,864	+				-2.2
3,788,872	-				+0.5
3,788,872	-				-1.7
3,788,872	-				-0.2
3,788,872	-				-3.2
3,788,872	-				-0.7
3,788,872	-				-0.6
3,788,872	-				-1.2
3,788,872	-				+0.4
3,788,872	-				-1.1
3,788,886	+				-1.1
3,788,886	+				-0.2
3,788,886	+				+0.7
3,788,886	+				-0.1
3,788,886	+				-0.0
3,788,886	+				+0.6
3,788,894	-				-0.7
3,788,894	-				+0.3
3,788,894	-				+1.5
3,788,894	-				+0.3
3,788,894	-				+1.2
3,788,965	+				-1.0
3,788,970	+				+2.8
3,788,978	-				+0.4
3,788,978	-				-2.7
3,788,998	-				-1.1
3,789,023	+		PGA1_c36210	0.11	-0.1
3,789,024	+		PGA1_c36210	0.11	+0.1