Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3578

Experiment: benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.4 mg/ml
3,753,528	-		Psest_3577	0.31	-1.6
3,753,677	-		Psest_3577	0.43	-0.2
3,753,677	-		Psest_3577	0.43	-0.2
3,753,677	-		Psest_3577	0.43	+0.0
3,753,677	-		Psest_3577	0.43	-0.2
3,753,709	+		Psest_3577	0.45	-0.3
3,753,709	+		Psest_3577	0.45	-1.3
3,753,709	+		Psest_3577	0.45	-0.2
3,753,710	-		Psest_3577	0.45	-0.3
3,753,710	-		Psest_3577	0.45	+0.7
3,753,710	-		Psest_3577	0.45	-0.3
3,753,710	-		Psest_3577	0.45	-0.6
3,753,844	+		Psest_3577	0.56	-0.7
3,753,844	+		Psest_3577	0.56	+1.0
3,753,844	+		Psest_3577	0.56	-0.9
3,753,844	+		Psest_3577	0.56	+0.0
3,753,844	+		Psest_3577	0.56	-0.5
3,753,844	+		Psest_3577	0.56	+0.5
3,753,844	+		Psest_3577	0.56	+0.6
3,753,844	+		Psest_3577	0.56	-1.0
3,753,844	+		Psest_3577	0.56	-0.7
3,753,845	-		Psest_3577	0.56	-0.3
3,753,845	-		Psest_3577	0.56	+1.5
3,753,845	-		Psest_3577	0.56	+0.2
3,753,878	+		Psest_3577	0.59	+0.0
3,753,878	+		Psest_3577	0.59	+0.2
3,753,878	+		Psest_3577	0.59	-0.5
3,753,878	+		Psest_3577	0.59	-0.2
3,753,878	+		Psest_3577	0.59	-0.5
3,753,878	+		Psest_3577	0.59	-0.0
3,753,879	-		Psest_3577	0.59	-0.4
3,753,879	-		Psest_3577	0.59	-0.2
3,753,879	-		Psest_3577	0.59	+0.2
3,753,879	-		Psest_3577	0.59	-1.3
3,753,879	-		Psest_3577	0.59	-0.2
3,753,879	-		Psest_3577	0.59	+0.0
3,753,879	-		Psest_3577	0.59	+0.3
3,753,879	-		Psest_3577	0.59	+0.1
3,753,879	-		Psest_3577	0.59	+0.3
3,753,879	-		Psest_3577	0.59	-0.2
3,754,072	+		Psest_3577	0.74	-1.6
3,754,072	+		Psest_3577	0.74	-0.7
3,754,072	+		Psest_3577	0.74	+0.1
3,754,072	+		Psest_3577	0.74	+0.4
3,754,072	+		Psest_3577	0.74	-0.5
3,754,072	+		Psest_3577	0.74	+0.0
3,754,072	+		Psest_3577	0.74	-1.4
3,754,072	+		Psest_3577	0.74	+0.0
3,754,072	+		Psest_3577	0.74	-0.2
3,754,072	+		Psest_3577	0.74	-0.3
3,754,073	-		Psest_3577	0.74	-0.1
3,754,073	-		Psest_3577	0.74	-0.2
3,754,073	-		Psest_3577	0.74	-0.5
3,754,073	-		Psest_3577	0.74	+0.4
3,754,073	-		Psest_3577	0.74	+1.4
3,754,073	-		Psest_3577	0.74	-0.4
3,754,075	+		Psest_3577	0.74	+1.1
3,754,075	+		Psest_3577	0.74	+0.1
3,754,075	+		Psest_3577	0.74	-0.7
3,754,076	-		Psest_3577	0.74	-0.7
3,754,076	-		Psest_3577	0.74	+1.0
3,754,076	-		Psest_3577	0.74	+0.1
3,754,076	-		Psest_3577	0.74	+0.8
3,754,076	-		Psest_3577	0.74	-1.3
3,754,078	+		Psest_3577	0.74	-0.4
3,754,078	+		Psest_3577	0.74	-1.3
3,754,078	+		Psest_3577	0.74	-0.8
3,754,078	+		Psest_3577	0.74	-0.5
3,754,078	+		Psest_3577	0.74	+0.9
3,754,078	+		Psest_3577	0.74	-0.1
3,754,078	+		Psest_3577	0.74	+0.1
3,754,078	+		Psest_3577	0.74	+0.5
3,754,079	-		Psest_3577	0.74	+0.2
3,754,079	-		Psest_3577	0.74	-1.1
3,754,079	-		Psest_3577	0.74	-0.8
3,754,079	-		Psest_3577	0.74	+1.1
3,754,079	-		Psest_3577	0.74	-0.3
3,754,079	-		Psest_3577	0.74	-0.3
3,754,079	-		Psest_3577	0.74	+0.0
3,754,374	+				+0.0
3,754,399	+				+0.1
3,754,399	+				-1.6
3,754,399	+				+0.4
3,754,400	-				+0.6
3,754,456	+				-0.1
3,754,456	+				-0.2
3,754,457	-				-0.7
3,754,457	-				+0.2
3,754,457	-				-0.6
3,754,472	+				+0.5
3,754,473	-				+0.8
3,754,526	+				+0.0
3,754,573	-				-1.0
3,754,673	+		Psest_3578	0.14	-0.9
3,754,673	+		Psest_3578	0.14	-0.2
3,754,674	-		Psest_3578	0.14	-0.6
3,754,674	-		Psest_3578	0.14	-0.2
3,754,769	+		Psest_3578	0.20	-1.3
3,754,769	+		Psest_3578	0.20	-0.1
3,754,769	+		Psest_3578	0.20	-0.6
3,754,773	+		Psest_3578	0.21	-0.3
3,754,773	+		Psest_3578	0.21	-0.3
3,754,774	-		Psest_3578	0.21	-0.5
3,754,785	-		Psest_3578	0.21	-0.7
3,754,785	-		Psest_3578	0.21	+0.4
3,754,838	+		Psest_3578	0.25	-0.5
3,754,839	-		Psest_3578	0.25	-0.6
3,754,839	-		Psest_3578	0.25	-1.4
3,754,888	+		Psest_3578	0.29	+0.8
3,754,889	-		Psest_3578	0.29	-1.7
3,754,944	+		Psest_3578	0.32	-0.4
3,754,944	+		Psest_3578	0.32	-2.1
3,754,944	+		Psest_3578	0.32	-1.8
3,754,945	-		Psest_3578	0.32	-0.5
3,754,945	-		Psest_3578	0.32	-0.2
3,754,945	-		Psest_3578	0.32	-0.7
3,754,945	-		Psest_3578	0.32	+0.0
3,754,945	-		Psest_3578	0.32	-0.7
3,755,018	+		Psest_3578	0.37	-0.7
3,755,018	+		Psest_3578	0.37	-0.9
3,755,018	+		Psest_3578	0.37	+0.4
3,755,019	-		Psest_3578	0.38	+0.1
3,755,019	-		Psest_3578	0.38	-0.7
3,755,019	-		Psest_3578	0.38	-1.3
3,755,019	-		Psest_3578	0.38	-0.8
3,755,019	-		Psest_3578	0.38	-1.8
3,755,019	-		Psest_3578	0.38	-1.0
3,755,045	+		Psest_3578	0.39	-1.2
3,755,046	-		Psest_3578	0.39	-0.8
3,755,046	-		Psest_3578	0.39	-0.5
3,755,046	-		Psest_3578	0.39	+0.9
3,755,112	-		Psest_3578	0.44	+0.1
3,755,143	+		Psest_3578	0.46	+0.0
3,755,143	+		Psest_3578	0.46	-0.1
3,755,153	+		Psest_3578	0.47	-1.9
3,755,153	+		Psest_3578	0.47	-0.6
3,755,153	+		Psest_3578	0.47	-0.9
3,755,153	+		Psest_3578	0.47	-0.9
3,755,153	+		Psest_3578	0.47	-0.7
3,755,153	+		Psest_3578	0.47	-0.2
3,755,153	+		Psest_3578	0.47	-0.1
3,755,153	+		Psest_3578	0.47	-0.3
3,755,153	+		Psest_3578	0.47	-0.3
3,755,153	+		Psest_3578	0.47	-0.8
3,755,153	+		Psest_3578	0.47	-0.1
3,755,153	+		Psest_3578	0.47	-0.9
3,755,153	+		Psest_3578	0.47	+0.0
3,755,153	+		Psest_3578	0.47	-0.8
3,755,153	+		Psest_3578	0.47	-0.9
3,755,153	+		Psest_3578	0.47	+0.1
3,755,153	+		Psest_3578	0.47	-0.2
3,755,154	-		Psest_3578	0.47	-1.6
3,755,154	-		Psest_3578	0.47	-2.1
3,755,154	-		Psest_3578	0.47	-0.4
3,755,154	-		Psest_3578	0.47	-1.2
3,755,154	-		Psest_3578	0.47	-1.2
3,755,154	-		Psest_3578	0.47	-0.5
3,755,154	-		Psest_3578	0.47	-1.5
3,755,154	-		Psest_3578	0.47	+0.2
3,755,154	-		Psest_3578	0.47	-0.5
3,755,154	-		Psest_3578	0.47	-1.0
3,755,154	-		Psest_3578	0.47	-1.2
3,755,154	-		Psest_3578	0.47	-1.3
3,755,154	-		Psest_3578	0.47	-0.2
3,755,154	-		Psest_3578	0.47	-0.4
3,755,154	-		Psest_3578	0.47	-0.4
3,755,154	-		Psest_3578	0.47	-1.0
3,755,154	-		Psest_3578	0.47	+0.6
3,755,154	-		Psest_3578	0.47	-0.5
3,755,154	-		Psest_3578	0.47	+0.3
3,755,154	-		Psest_3578	0.47	-0.5
3,755,154	-		Psest_3578	0.47	-0.8
3,755,154	-		Psest_3578	0.47	+0.5
3,755,154	-		Psest_3578	0.47	-0.9
3,755,154	-		Psest_3578	0.47	-0.6
3,755,154	-		Psest_3578	0.47	-0.4
3,755,197	+		Psest_3578	0.50	-1.8
3,755,198	-		Psest_3578	0.50	-1.5
3,755,198	-		Psest_3578	0.50	+0.0
3,755,198	-		Psest_3578	0.50	+1.2
3,755,198	-		Psest_3578	0.50	+0.7
3,755,198	-		Psest_3578	0.50	-1.8
3,755,333	+		Psest_3578	0.59	-1.1
3,755,333	+		Psest_3578	0.59	-2.0
3,755,333	+		Psest_3578	0.59	-0.6
3,755,333	+		Psest_3578	0.59	-1.1
3,755,333	+		Psest_3578	0.59	-0.6
3,755,333	+		Psest_3578	0.59	-1.6
3,755,334	-		Psest_3578	0.59	-0.4
3,755,334	-		Psest_3578	0.59	-0.5
3,755,334	-		Psest_3578	0.59	-0.8
3,755,334	-		Psest_3578	0.59	-2.4
3,755,334	-		Psest_3578	0.59	-1.0
3,755,334	-		Psest_3578	0.59	-0.2
3,755,334	-		Psest_3578	0.59	+0.3
3,755,359	-		Psest_3578	0.61	-0.6
3,755,359	-		Psest_3578	0.61	+0.0
3,755,359	-		Psest_3578	0.61	-1.2
3,755,359	-		Psest_3578	0.61	-0.2
3,755,359	-		Psest_3578	0.61	-1.0
3,755,359	-		Psest_3578	0.61	-0.4
3,755,366	+		Psest_3578	0.61	-0.2
3,755,399	+		Psest_3578	0.64	+0.3
3,755,399	+		Psest_3578	0.64	+0.2
3,755,399	+		Psest_3578	0.64	-0.7
3,755,399	+		Psest_3578	0.64	-1.3
3,755,399	+		Psest_3578	0.64	-2.0
3,755,399	+		Psest_3578	0.64	+1.2
3,755,399	+		Psest_3578	0.64	+0.1
3,755,399	+		Psest_3578	0.64	-1.6
3,755,399	+		Psest_3578	0.64	-0.5
3,755,400	-		Psest_3578	0.64	+1.4
3,755,400	-		Psest_3578	0.64	+0.5
3,755,400	-		Psest_3578	0.64	-0.3
3,755,400	-		Psest_3578	0.64	-1.6
3,755,400	-		Psest_3578	0.64	-0.2
3,755,400	-		Psest_3578	0.64	-0.4
3,755,400	-		Psest_3578	0.64	-0.4
3,755,400	-		Psest_3578	0.64	-0.7
3,755,400	-		Psest_3578	0.64	-0.7
3,755,548	-		Psest_3578	0.74	-0.7
3,755,582	+		Psest_3578	0.76	-2.2
3,755,827	+				+0.0
3,755,827	+				-1.3
3,755,828	-				+2.6
3,755,828	-				-0.5
3,755,973	+				+0.5
3,755,973	+				+0.5
3,755,974	-				+0.6
3,755,977	+				+0.0
3,756,001	-				+0.0
3,756,047	-				+1.1
3,756,048	+				+0.0
3,756,048	+				+0.4
3,756,048	+				-0.4