Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1280

Experiment: benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.4 mg/ml
1,382,459	+				+0.6
1,382,460	-				-0.7
1,382,517	+		Psest_1279	0.15	-1.0
1,382,518	-		Psest_1279	0.16	-2.0
1,382,518	-		Psest_1279	0.16	-1.7
1,382,518	-		Psest_1279	0.16	+0.8
1,382,566	+		Psest_1279	0.28	+0.4
1,382,566	+		Psest_1279	0.28	-0.2
1,382,566	+		Psest_1279	0.28	-0.6
1,382,567	-		Psest_1279	0.28	-1.1
1,382,567	-		Psest_1279	0.28	-0.5
1,382,923	-				-0.4
1,382,935	-				+0.1
1,382,935	-				-0.5
1,383,117	+				-1.0
1,383,118	-				-0.8
1,383,209	-		Psest_1280	0.13	-0.9
1,383,240	-		Psest_1280	0.14	-0.3
1,383,364	+		Psest_1280	0.20	-0.3
1,383,364	+		Psest_1280	0.20	+0.8
1,383,364	+		Psest_1280	0.20	-0.5
1,383,364	+		Psest_1280	0.20	-1.0
1,383,364	+		Psest_1280	0.20	-0.7
1,383,365	-		Psest_1280	0.20	-1.1
1,383,365	-		Psest_1280	0.20	-1.2
1,383,365	-		Psest_1280	0.20	-0.8
1,383,365	-		Psest_1280	0.20	-1.6
1,383,365	-		Psest_1280	0.20	-0.3
1,383,616	+		Psest_1280	0.31	-0.4
1,383,616	+		Psest_1280	0.31	-2.0
1,383,617	-		Psest_1280	0.31	-1.2
1,383,666	+		Psest_1280	0.34	-1.4
1,383,739	+		Psest_1280	0.37	-0.7
1,383,748	+		Psest_1280	0.37	-0.6
1,383,749	-		Psest_1280	0.37	-0.6
1,383,835	+		Psest_1280	0.41	-0.8
1,383,835	+		Psest_1280	0.41	-0.4
1,383,835	+		Psest_1280	0.41	-1.6
1,383,835	+		Psest_1280	0.41	+0.0
1,383,836	-		Psest_1280	0.41	-1.0
1,383,856	+		Psest_1280	0.42	-0.1
1,383,856	+		Psest_1280	0.42	-1.0
1,383,856	+		Psest_1280	0.42	-0.1
1,383,856	+		Psest_1280	0.42	-0.9
1,383,856	+		Psest_1280	0.42	+0.4
1,383,857	-		Psest_1280	0.42	+0.0
1,383,857	-		Psest_1280	0.42	-0.5
1,383,857	-		Psest_1280	0.42	-1.0
1,383,859	+		Psest_1280	0.42	-0.3
1,383,859	+		Psest_1280	0.42	-1.2
1,383,859	+		Psest_1280	0.42	-1.0
1,383,859	+		Psest_1280	0.42	-1.3
1,383,859	+		Psest_1280	0.42	-1.1
1,383,859	+		Psest_1280	0.42	-0.2
1,383,859	+		Psest_1280	0.42	-0.7
1,383,859	+		Psest_1280	0.42	-1.6
1,383,859	+		Psest_1280	0.42	-1.1
1,383,859	+		Psest_1280	0.42	-0.7
1,383,860	-		Psest_1280	0.42	+0.1
1,383,860	-		Psest_1280	0.42	-0.4
1,383,860	-		Psest_1280	0.42	-0.4
1,383,860	-		Psest_1280	0.42	-0.1
1,383,860	-		Psest_1280	0.42	-0.4
1,383,860	-		Psest_1280	0.42	+0.2
1,383,860	-		Psest_1280	0.42	-1.2
1,383,865	+		Psest_1280	0.43	-1.2
1,383,865	+		Psest_1280	0.43	-0.6
1,383,865	+		Psest_1280	0.43	-1.8
1,383,865	+		Psest_1280	0.43	-1.4
1,383,865	+		Psest_1280	0.43	+0.0
1,383,865	+		Psest_1280	0.43	-1.7
1,383,866	-		Psest_1280	0.43	-0.2
1,383,866	-		Psest_1280	0.43	-0.9
1,383,866	-		Psest_1280	0.43	-0.4
1,383,889	+		Psest_1280	0.44	-1.8
1,383,889	+		Psest_1280	0.44	+0.0
1,383,889	+		Psest_1280	0.44	-0.5
1,383,889	+		Psest_1280	0.44	-1.0
1,383,889	+		Psest_1280	0.44	-2.7
1,383,889	+		Psest_1280	0.44	+0.3
1,383,889	+		Psest_1280	0.44	-2.0
1,383,889	+		Psest_1280	0.44	-1.5
1,383,889	+		Psest_1280	0.44	+0.1
1,383,889	+		Psest_1280	0.44	-0.8
1,383,889	+		Psest_1280	0.44	+1.2
1,383,889	+		Psest_1280	0.44	-1.0
1,383,889	+		Psest_1280	0.44	-0.7
1,383,890	-		Psest_1280	0.44	-0.8
1,383,890	-		Psest_1280	0.44	-1.0
1,383,890	-		Psest_1280	0.44	-1.3
1,383,890	-		Psest_1280	0.44	-1.2
1,383,890	-		Psest_1280	0.44	-0.9
1,383,890	-		Psest_1280	0.44	-1.0
1,383,890	-		Psest_1280	0.44	-1.1
1,383,890	-		Psest_1280	0.44	-1.0
1,383,890	-		Psest_1280	0.44	-1.2
1,383,890	-		Psest_1280	0.44	-1.8
1,383,890	-		Psest_1280	0.44	-0.9
1,383,890	-		Psest_1280	0.44	-0.0
1,383,890	-		Psest_1280	0.44	-0.9
1,384,138	+		Psest_1280	0.55	-1.6
1,384,138	+		Psest_1280	0.55	-0.2
1,384,237	+		Psest_1280	0.60	+1.0
1,384,237	+		Psest_1280	0.60	-1.3
1,384,279	-		Psest_1280	0.61	-1.0
1,384,332	+		Psest_1280	0.64	-1.8
1,384,339	+		Psest_1280	0.64	-2.9
1,384,340	-		Psest_1280	0.64	+0.7
1,384,439	+		Psest_1280	0.69	+0.7
1,384,439	+		Psest_1280	0.69	-2.2
1,384,440	-		Psest_1280	0.69	-1.7
1,384,440	-		Psest_1280	0.69	-0.3
1,384,567	+		Psest_1280	0.74	+0.2
1,384,567	+		Psest_1280	0.74	-1.0
1,384,567	+		Psest_1280	0.74	-0.4
1,384,567	+		Psest_1280	0.74	-1.4
1,384,588	+		Psest_1280	0.75	-1.1
1,384,588	+		Psest_1280	0.75	-1.0
1,384,588	+		Psest_1280	0.75	-1.2
1,384,588	+		Psest_1280	0.75	-0.6
1,384,588	+		Psest_1280	0.75	-0.2
1,384,588	+		Psest_1280	0.75	-0.5
1,384,588	+		Psest_1280	0.75	-0.6
1,384,589	-		Psest_1280	0.75	+0.3
1,384,589	-		Psest_1280	0.75	-1.0
1,384,589	-		Psest_1280	0.75	-0.9
1,384,589	-		Psest_1280	0.75	-0.9
1,384,603	+		Psest_1280	0.76	-0.3
1,384,603	+		Psest_1280	0.76	-0.6
1,384,603	+		Psest_1280	0.76	-1.2
1,384,603	+		Psest_1280	0.76	+0.1
1,384,604	-		Psest_1280	0.76	-1.0
1,384,604	-		Psest_1280	0.76	+0.0
1,384,604	-		Psest_1280	0.76	+0.0
1,384,604	-		Psest_1280	0.76	+0.3
1,384,705	-		Psest_1280	0.81	-1.4
1,384,810	+		Psest_1280	0.85	-0.8
1,384,810	+		Psest_1280	0.85	-0.5
1,384,810	+		Psest_1280	0.85	-2.2
1,384,810	+		Psest_1280	0.85	-0.9
1,384,810	+		Psest_1280	0.85	-0.5
1,384,810	+		Psest_1280	0.85	-2.0
1,384,810	+		Psest_1280	0.85	-2.3
1,384,811	-		Psest_1280	0.86	-0.9
1,384,811	-		Psest_1280	0.86	-1.0
1,384,811	-		Psest_1280	0.86	-1.6
1,384,811	-		Psest_1280	0.86	+0.2
1,384,811	-		Psest_1280	0.86	+1.6
1,384,811	-		Psest_1280	0.86	-0.8
1,384,811	-		Psest_1280	0.86	-1.9
1,385,011	+				+0.0
1,385,012	-				-1.6
1,385,012	-				-0.8
1,385,012	-				-0.9
1,385,101	+				-0.3
1,385,101	+				-1.0
1,385,101	+				-0.8
1,385,101	+				-0.7
1,385,102	-				-1.2
1,385,102	-				-0.4
1,385,102	-				+0.1
1,385,137	+				-0.5
1,385,138	-				-0.4
1,385,138	-				-0.4
1,385,147	-				-1.2
1,385,178	+				-0.6
1,385,178	+				-0.5
1,385,178	+				+1.0
1,385,178	+				+0.3
1,385,178	+				-0.7
1,385,178	+				+1.5
1,385,179	-				-1.3
1,385,179	-				-0.6
1,385,179	-				+0.3
1,385,293	+				+0.4
1,385,294	-				+1.0
1,385,352	-				-0.2
1,385,352	-				-1.2
1,385,352	-				-0.6
1,385,423	-				+0.2
1,385,478	+				+0.4
1,385,559	-		Psest_1281	0.16	-1.9
1,385,559	-		Psest_1281	0.16	-1.3
1,385,559	-		Psest_1281	0.16	-1.0
1,385,577	+		Psest_1281	0.17	-0.6
1,385,578	-		Psest_1281	0.17	+0.8
1,385,591	+		Psest_1281	0.18	+1.3
1,385,591	+		Psest_1281	0.18	+0.1
1,385,592	-		Psest_1281	0.18	+0.6
1,385,592	-		Psest_1281	0.18	-0.4
1,385,592	-		Psest_1281	0.18	-0.4
1,385,592	-		Psest_1281	0.18	+0.2
1,385,592	-		Psest_1281	0.18	+0.1
1,385,592	-		Psest_1281	0.18	-0.7
1,385,681	+		Psest_1281	0.25	-1.6
1,385,693	+		Psest_1281	0.26	+1.0
1,385,693	+		Psest_1281	0.26	+0.7
1,385,694	-		Psest_1281	0.26	+0.5
1,385,694	-		Psest_1281	0.26	+0.4
1,385,694	-		Psest_1281	0.26	+0.5
1,385,694	-		Psest_1281	0.26	+0.0
1,385,779	+		Psest_1281	0.33	-0.9
1,385,779	+		Psest_1281	0.33	+1.3
1,385,779	+		Psest_1281	0.33	+1.2
1,385,780	-		Psest_1281	0.33	-1.2
1,385,780	-		Psest_1281	0.33	-0.1
1,385,882	+		Psest_1281	0.40	+0.0
1,385,882	+		Psest_1281	0.40	+0.6