Strain Fitness in Dechlorosoma suillum PS around Dsui_1327

Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1325 and Dsui_1326 are separated by 54 nucleotidesDsui_1326 and Dsui_1327 are separated by 119 nucleotidesDsui_1327 and Dsui_1328 are separated by 21 nucleotidesDsui_1328 and Dsui_1329 are separated by 37 nucleotides Dsui_1325: Dsui_1325 - ADP-ribose pyrophosphatase, at 1,385,541 to 1,386,065 _1325 Dsui_1326: Dsui_1326 - putative signal-transduction protein containing cAMP-binding and CBS domains, at 1,386,120 to 1,386,731 _1326 Dsui_1327: Dsui_1327 - CNP1-like family, at 1,386,851 to 1,387,348 _1327 Dsui_1328: Dsui_1328 - ubiquinone biosynthesis protein COQ7, at 1,387,370 to 1,387,993 _1328 Dsui_1329: Dsui_1329 - putative redox protein, regulator of disulfide bond formation, at 1,388,031 to 1,388,447 _1329 Position (kb) 1386 1387 1388Strain fitness (log2 ratio) -2 -1 0 1 2at 1385.894 kb on + strand, within Dsui_1325at 1385.973 kb on - strand, within Dsui_1325at 1386.009 kb on - strand, within Dsui_1325at 1386.031 kb on + strandat 1386.031 kb on + strandat 1386.084 kb on + strandat 1386.084 kb on + strandat 1386.084 kb on + strandat 1386.092 kb on - strandat 1386.111 kb on - strandat 1386.112 kb on - strandat 1386.137 kb on + strandat 1386.137 kb on + strandat 1386.178 kb on + strandat 1386.215 kb on - strand, within Dsui_1326at 1386.218 kb on + strand, within Dsui_1326at 1386.218 kb on + strand, within Dsui_1326at 1386.220 kb on - strand, within Dsui_1326at 1386.220 kb on - strand, within Dsui_1326at 1386.223 kb on + strand, within Dsui_1326at 1386.239 kb on + strand, within Dsui_1326at 1386.247 kb on - strand, within Dsui_1326at 1386.274 kb on + strand, within Dsui_1326at 1386.274 kb on + strand, within Dsui_1326at 1386.274 kb on + strand, within Dsui_1326at 1386.293 kb on + strand, within Dsui_1326at 1386.305 kb on - strand, within Dsui_1326at 1386.305 kb on - strand, within Dsui_1326at 1386.311 kb on + strand, within Dsui_1326at 1386.311 kb on + strand, within Dsui_1326at 1386.311 kb on + strand, within Dsui_1326at 1386.319 kb on - strand, within Dsui_1326at 1386.319 kb on - strand, within Dsui_1326at 1386.319 kb on - strand, within Dsui_1326at 1386.330 kb on + strand, within Dsui_1326at 1386.393 kb on + strand, within Dsui_1326at 1386.425 kb on + strand, within Dsui_1326at 1386.425 kb on + strand, within Dsui_1326at 1386.448 kb on - strand, within Dsui_1326at 1386.482 kb on - strandat 1386.660 kb on + strand, within Dsui_1326at 1386.660 kb on + strand, within Dsui_1326at 1386.668 kb on - strand, within Dsui_1326at 1386.668 kb on - strand, within Dsui_1326at 1386.678 kb on - strandat 1386.678 kb on - strandat 1386.678 kb on - strandat 1386.681 kb on + strandat 1386.741 kb on + strandat 1386.755 kb on + strandat 1386.760 kb on + strandat 1386.765 kb on + strandat 1386.766 kb on + strandat 1386.774 kb on - strandat 1386.821 kb on + strandat 1386.822 kb on + strandat 1386.829 kb on - strandat 1386.832 kb on + strandat 1386.842 kb on + strandat 1386.842 kb on - strandat 1386.848 kb on + strandat 1386.881 kb on + strandat 1386.881 kb on + strandat 1386.889 kb on - strandat 1386.893 kb on + strandat 1386.893 kb on + strandat 1386.893 kb on + strandat 1386.925 kb on + strand, within Dsui_1327at 1386.937 kb on + strand, within Dsui_1327at 1386.937 kb on + strand, within Dsui_1327at 1386.967 kb on + strand, within Dsui_1327at 1386.975 kb on - strand, within Dsui_1327at 1386.991 kb on + strand, within Dsui_1327at 1387.004 kb on + strand, within Dsui_1327at 1387.004 kb on + strand, within Dsui_1327at 1387.004 kb on + strand, within Dsui_1327at 1387.013 kb on + strand, within Dsui_1327at 1387.013 kb on - strand, within Dsui_1327at 1387.013 kb on - strand, within Dsui_1327at 1387.013 kb on - strand, within Dsui_1327at 1387.013 kb on - strand, within Dsui_1327at 1387.020 kb on + strand, within Dsui_1327at 1387.047 kb on + strand, within Dsui_1327at 1387.055 kb on - strand, within Dsui_1327at 1387.085 kb on + strand, within Dsui_1327at 1387.093 kb on - strand, within Dsui_1327at 1387.110 kb on + strand, within Dsui_1327at 1387.118 kb on + strand, within Dsui_1327at 1387.126 kb on - strand, within Dsui_1327at 1387.150 kb on - strand, within Dsui_1327at 1387.169 kb on + strand, within Dsui_1327at 1387.169 kb on + strand, within Dsui_1327at 1387.177 kb on - strand, within Dsui_1327at 1387.179 kb on + strand, within Dsui_1327at 1387.186 kb on + strand, within Dsui_1327at 1387.191 kb on + strand, within Dsui_1327at 1387.199 kb on - strand, within Dsui_1327at 1387.199 kb on - strand, within Dsui_1327at 1387.204 kb on - strand, within Dsui_1327at 1387.214 kb on - strand, within Dsui_1327at 1387.219 kb on - strand, within Dsui_1327at 1387.224 kb on - strand, within Dsui_1327at 1387.292 kb on + strand, within Dsui_1327at 1387.292 kb on + strand, within Dsui_1327at 1387.292 kb on + strand, within Dsui_1327at 1387.292 kb on + strand, within Dsui_1327at 1387.292 kb on + strand, within Dsui_1327at 1387.295 kb on - strand, within Dsui_1327at 1387.298 kb on - strand, within Dsui_1327at 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.300 kb on - strandat 1387.319 kb on - strandat 1387.326 kb on + strandat 1387.348 kb on + strandat 1387.355 kb on + strandat 1387.360 kb on + strandat 1388.002 kb on - strandat 1388.009 kb on + strandat 1388.014 kb on + strandat 1388.017 kb on - strandat 1388.022 kb on - strandat 1388.022 kb on - strandat 1388.051 kb on + strandat 1388.059 kb on - strandat 1388.079 kb on - strand, within Dsui_1329at 1388.079 kb on - strand, within Dsui_1329at 1388.098 kb on - strand, within Dsui_1329at 1388.103 kb on - strand, within Dsui_1329at 1388.103 kb on - strand, within Dsui_1329at 1388.108 kb on - strand, within Dsui_1329at 1388.125 kb on + strand, within Dsui_1329at 1388.165 kb on + strand, within Dsui_1329at 1388.194 kb on + strand, within Dsui_1329at 1388.194 kb on + strand, within Dsui_1329at 1388.194 kb on + strand, within Dsui_1329at 1388.201 kb on + strand, within Dsui_1329at 1388.201 kb on + strand, within Dsui_1329at 1388.202 kb on - strand, within Dsui_1329at 1388.221 kb on + strand, within Dsui_1329at 1388.224 kb on - strand, within Dsui_1329at 1388.226 kb on + strand, within Dsui_1329at 1388.229 kb on - strand, within Dsui_1329at 1388.241 kb on + strand, within Dsui_1329at 1388.241 kb on - strand, within Dsui_1329at 1388.282 kb on + strand, within Dsui_1329at 1388.282 kb on + strand, within Dsui_1329at 1388.284 kb on - strand, within Dsui_1329at 1388.290 kb on - strand, within Dsui_1329at 1388.290 kb on - strand, within Dsui_1329at 1388.290 kb on - strand, within Dsui_1329at 1388.290 kb on - strand, within Dsui_1329at 1388.297 kb on - strand, within Dsui_1329at 1388.300 kb on + strand, within Dsui_1329at 1388.300 kb on + strand, within Dsui_1329at 1388.303 kb on - strand, within Dsui_1329at 1388.336 kb on + strand, within Dsui_1329at 1388.336 kb on + strand, within Dsui_1329at 1388.343 kb on + strand, within Dsui_1329at 1388.343 kb on + strand, within Dsui_1329

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)
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1,385,894 + Dsui_1325 0.67 +0.8
1,385,973 - Dsui_1325 0.82 +0.6
1,386,009 - Dsui_1325 0.89 +0.1
1,386,031 + -0.1
1,386,031 + -0.8
1,386,084 + +0.1
1,386,084 + +0.4
1,386,084 + -0.1
1,386,092 - +0.3
1,386,111 - +1.3
1,386,112 - +0.4
1,386,137 + +0.4
1,386,137 + -0.6
1,386,178 + -0.2
1,386,215 - Dsui_1326 0.16 -0.6
1,386,218 + Dsui_1326 0.16 -0.3
1,386,218 + Dsui_1326 0.16 -0.6
1,386,220 - Dsui_1326 0.16 +0.3
1,386,220 - Dsui_1326 0.16 -1.0
1,386,223 + Dsui_1326 0.17 -0.2
1,386,239 + Dsui_1326 0.19 -0.2
1,386,247 - Dsui_1326 0.21 +0.3
1,386,274 + Dsui_1326 0.25 -0.4
1,386,274 + Dsui_1326 0.25 +0.0
1,386,274 + Dsui_1326 0.25 +0.1
1,386,293 + Dsui_1326 0.28 -0.3
1,386,305 - Dsui_1326 0.30 +0.2
1,386,305 - Dsui_1326 0.30 +0.0
1,386,311 + Dsui_1326 0.31 -0.0
1,386,311 + Dsui_1326 0.31 +0.0
1,386,311 + Dsui_1326 0.31 -0.5
1,386,319 - Dsui_1326 0.33 -0.0
1,386,319 - Dsui_1326 0.33 -0.1
1,386,319 - Dsui_1326 0.33 +0.6
1,386,330 + Dsui_1326 0.34 -0.2
1,386,393 + Dsui_1326 0.45 -1.1
1,386,425 + Dsui_1326 0.50 +0.1
1,386,425 + Dsui_1326 0.50 -0.2
1,386,448 - Dsui_1326 0.54 -0.3
1,386,482 - +0.8
1,386,660 + Dsui_1326 0.88 -1.1
1,386,660 + Dsui_1326 0.88 +0.1
1,386,668 - Dsui_1326 0.90 -0.2
1,386,668 - Dsui_1326 0.90 -0.3
1,386,678 - -1.2
1,386,678 - +0.3
1,386,678 - -0.5
1,386,681 + +0.1
1,386,741 + -0.7
1,386,755 + -0.5
1,386,760 + -0.2
1,386,765 + +0.2
1,386,766 + -0.1
1,386,774 - -1.0
1,386,821 + -0.7
1,386,822 + -0.2
1,386,829 - +1.0
1,386,832 + -0.5
1,386,842 + -0.1
1,386,842 - -0.4
1,386,848 + -2.5
1,386,881 + -0.6
1,386,881 + -0.3
1,386,889 - -0.8
1,386,893 + +0.4
1,386,893 + +0.1
1,386,893 + -0.0
1,386,925 + Dsui_1327 0.15 +0.1
1,386,937 + Dsui_1327 0.17 +0.3
1,386,937 + Dsui_1327 0.17 +0.1
1,386,967 + Dsui_1327 0.23 +0.3
1,386,975 - Dsui_1327 0.25 +0.5
1,386,991 + Dsui_1327 0.28 -0.2
1,387,004 + Dsui_1327 0.31 -0.1
1,387,004 + Dsui_1327 0.31 -0.0
1,387,004 + Dsui_1327 0.31 +0.3
1,387,013 + Dsui_1327 0.33 +0.4
1,387,013 - Dsui_1327 0.33 +0.2
1,387,013 - Dsui_1327 0.33 +1.1
1,387,013 - Dsui_1327 0.33 +0.2
1,387,013 - Dsui_1327 0.33 -1.1
1,387,020 + Dsui_1327 0.34 +0.0
1,387,047 + Dsui_1327 0.39 +0.1
1,387,055 - Dsui_1327 0.41 -0.6
1,387,085 + Dsui_1327 0.47 +0.3
1,387,093 - Dsui_1327 0.49 -0.8
1,387,110 + Dsui_1327 0.52 -1.1
1,387,118 + Dsui_1327 0.54 +0.3
1,387,126 - Dsui_1327 0.55 +1.3
1,387,150 - Dsui_1327 0.60 +0.6
1,387,169 + Dsui_1327 0.64 +0.1
1,387,169 + Dsui_1327 0.64 -0.5
1,387,177 - Dsui_1327 0.65 +0.8
1,387,179 + Dsui_1327 0.66 -0.4
1,387,186 + Dsui_1327 0.67 +0.1
1,387,191 + Dsui_1327 0.68 -0.1
1,387,199 - Dsui_1327 0.70 +0.1
1,387,199 - Dsui_1327 0.70 +2.2
1,387,204 - Dsui_1327 0.71 -1.3
1,387,214 - Dsui_1327 0.73 +1.4
1,387,219 - Dsui_1327 0.74 -0.9
1,387,224 - Dsui_1327 0.75 -1.4
1,387,292 + Dsui_1327 0.89 +0.0
1,387,292 + Dsui_1327 0.89 -0.2
1,387,292 + Dsui_1327 0.89 -0.3
1,387,292 + Dsui_1327 0.89 +0.1
1,387,292 + Dsui_1327 0.89 +0.4
1,387,295 - Dsui_1327 0.89 -0.3
1,387,298 - Dsui_1327 0.90 +0.4
1,387,300 - -0.3
1,387,300 - -1.1
1,387,300 - +0.5
1,387,300 - -0.4
1,387,300 - -0.8
1,387,300 - -0.6
1,387,300 - -0.1
1,387,300 - +0.4
1,387,319 - -0.7
1,387,326 + -0.7
1,387,348 + +0.5
1,387,355 + +0.3
1,387,360 + -0.0
1,388,002 - -0.6
1,388,009 + -0.1
1,388,014 + -0.1
1,388,017 - +0.4
1,388,022 - +0.9
1,388,022 - -0.1
1,388,051 + +0.5
1,388,059 - -0.2
1,388,079 - Dsui_1329 0.12 -0.6
1,388,079 - Dsui_1329 0.12 +0.2
1,388,098 - Dsui_1329 0.16 +0.5
1,388,103 - Dsui_1329 0.17 -1.0
1,388,103 - Dsui_1329 0.17 +0.3
1,388,108 - Dsui_1329 0.18 +1.4
1,388,125 + Dsui_1329 0.23 -0.3
1,388,165 + Dsui_1329 0.32 -0.1
1,388,194 + Dsui_1329 0.39 +0.1
1,388,194 + Dsui_1329 0.39 -0.0
1,388,194 + Dsui_1329 0.39 +0.2
1,388,201 + Dsui_1329 0.41 +0.3
1,388,201 + Dsui_1329 0.41 +0.6
1,388,202 - Dsui_1329 0.41 -0.0
1,388,221 + Dsui_1329 0.46 +0.1
1,388,224 - Dsui_1329 0.46 -0.5
1,388,226 + Dsui_1329 0.47 -0.4
1,388,229 - Dsui_1329 0.47 -0.6
1,388,241 + Dsui_1329 0.50 +0.1
1,388,241 - Dsui_1329 0.50 -0.6
1,388,282 + Dsui_1329 0.60 -0.1
1,388,282 + Dsui_1329 0.60 +0.6
1,388,284 - Dsui_1329 0.61 +0.7
1,388,290 - Dsui_1329 0.62 +0.7
1,388,290 - Dsui_1329 0.62 -0.3
1,388,290 - Dsui_1329 0.62 -0.9
1,388,290 - Dsui_1329 0.62 +0.2
1,388,297 - Dsui_1329 0.64 -0.5
1,388,300 + Dsui_1329 0.65 -0.3
1,388,300 + Dsui_1329 0.65 +1.0
1,388,303 - Dsui_1329 0.65 -0.3
1,388,336 + Dsui_1329 0.73 +0.3
1,388,336 + Dsui_1329 0.73 +0.1
1,388,343 + Dsui_1329 0.75 -0.5
1,388,343 + Dsui_1329 0.75 -0.3

Or see this region's nucleotide sequence