Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0268 and Dsui_0269 are separated by 9 nucleotides Dsui_0269 and Dsui_0270 are separated by 8 nucleotides Dsui_0270 and Dsui_0271 are separated by 77 nucleotides
Dsui_0268: Dsui_0268 - ABC-type multidrug transport system, ATPase component, at 267,757 to 270,513
_0268
Dsui_0269: Dsui_0269 - ABC-type multidrug transport system, permease component, at 270,523 to 271,659
_0269
Dsui_0270: Dsui_0270 - transcriptional regulator, at 271,668 to 272,336
_0270
Dsui_0271: Dsui_0271 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 272,414 to 273,121
_0271
Position (kb) 270
271
272 Strain fitness (log2 ratio) -1
0
1
2
3 at 269.533 kb on - strand, within Dsui_0268 at 269.617 kb on - strand, within Dsui_0268 at 269.797 kb on + strand, within Dsui_0268 at 269.860 kb on + strand, within Dsui_0268 at 269.863 kb on - strand at 269.865 kb on + strand, within Dsui_0268 at 269.873 kb on - strand at 269.874 kb on - strand, within Dsui_0268 at 270.014 kb on + strand, within Dsui_0268 at 270.032 kb on - strand, within Dsui_0268 at 270.042 kb on - strand at 270.088 kb on - strand, within Dsui_0268 at 270.135 kb on - strand, within Dsui_0268 at 270.186 kb on + strand, within Dsui_0268 at 270.194 kb on - strand at 270.209 kb on + strand, within Dsui_0268 at 270.209 kb on + strand, within Dsui_0268 at 270.217 kb on - strand, within Dsui_0268 at 270.217 kb on - strand, within Dsui_0268 at 270.240 kb on + strand at 270.360 kb on - strand at 270.360 kb on - strand at 270.409 kb on + strand at 270.414 kb on + strand at 270.455 kb on + strand at 270.463 kb on - strand at 270.705 kb on + strand, within Dsui_0269 at 270.705 kb on - strand, within Dsui_0269 at 270.750 kb on + strand, within Dsui_0269 at 270.818 kb on + strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 270.918 kb on - strand, within Dsui_0269 at 271.029 kb on + strand, within Dsui_0269 at 271.067 kb on + strand, within Dsui_0269 at 271.171 kb on + strand, within Dsui_0269 at 271.179 kb on - strand, within Dsui_0269 at 271.189 kb on - strand, within Dsui_0269 at 271.203 kb on + strand, within Dsui_0269 at 271.211 kb on - strand, within Dsui_0269 at 271.329 kb on - strand, within Dsui_0269 at 271.340 kb on - strand, within Dsui_0269 at 271.383 kb on + strand, within Dsui_0269 at 271.412 kb on + strand, within Dsui_0269 at 271.529 kb on - strand, within Dsui_0269 at 271.653 kb on + strand at 271.661 kb on - strand at 271.844 kb on - strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.039 kb on + strand, within Dsui_0270 at 272.047 kb on - strand, within Dsui_0270 at 272.167 kb on + strand, within Dsui_0270 at 272.226 kb on + strand, within Dsui_0270 at 272.478 kb on + strand at 272.502 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) remove 269,533 - Dsui_0268 0.64 +1.8 269,617 - Dsui_0268 0.67 +0.8 269,797 + Dsui_0268 0.74 +0.2 269,860 + Dsui_0268 0.76 +0.2 269,863 - +1.8 269,865 + Dsui_0268 0.76 +2.8 269,873 - +1.8 269,874 - Dsui_0268 0.77 +1.8 270,014 + Dsui_0268 0.82 +1.8 270,032 - Dsui_0268 0.83 -0.2 270,042 - +1.8 270,088 - Dsui_0268 0.85 +0.2 270,135 - Dsui_0268 0.86 +0.2 270,186 + Dsui_0268 0.88 +1.8 270,194 - +1.8 270,209 + Dsui_0268 0.89 +0.2 270,209 + Dsui_0268 0.89 +2.2 270,217 - Dsui_0268 0.89 -0.4 270,217 - Dsui_0268 0.89 +0.8 270,240 + -0.8 270,360 - +1.8 270,360 - +2.8 270,409 + +1.8 270,414 + +1.8 270,455 + +0.8 270,463 - +1.8 270,705 + Dsui_0269 0.16 +1.8 270,705 - Dsui_0269 0.16 +0.2 270,750 + Dsui_0269 0.20 +1.8 270,818 + Dsui_0269 0.26 +0.8 270,918 - Dsui_0269 0.35 +0.8 270,918 - Dsui_0269 0.35 -0.8 271,029 + Dsui_0269 0.45 +1.8 271,067 + Dsui_0269 0.48 +1.8 271,171 + Dsui_0269 0.57 +0.2 271,179 - Dsui_0269 0.58 +0.8 271,189 - Dsui_0269 0.59 -1.4 271,203 + Dsui_0269 0.60 +0.8 271,211 - Dsui_0269 0.61 +1.8 271,329 - Dsui_0269 0.71 +1.8 271,340 - Dsui_0269 0.72 +0.8 271,383 + Dsui_0269 0.76 +0.8 271,412 + Dsui_0269 0.78 +1.8 271,529 - Dsui_0269 0.88 +1.8 271,653 + -0.9 271,661 - -0.5 271,844 - Dsui_0270 0.26 -0.7 272,039 + Dsui_0270 0.55 -0.4 272,039 + Dsui_0270 0.55 +2.2 272,047 - Dsui_0270 0.57 -0.0 272,167 + Dsui_0270 0.75 -0.4 272,226 + Dsui_0270 0.83 +0.0 272,478 + +0.4 272,502 + -0.4
Or see this region's nucleotide sequence