Strain Fitness in Dechlorosoma suillum PS around Dsui_0267

Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0266 and Dsui_0267 are separated by 438 nucleotidesDsui_0267 and Dsui_0268 are separated by 48 nucleotides Dsui_0266: Dsui_0266 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 265,600 to 266,283 _0266 Dsui_0267: Dsui_0267 - multidrug resistance efflux pump, at 266,722 to 267,708 _0267 Dsui_0268: Dsui_0268 - ABC-type multidrug transport system, ATPase component, at 267,757 to 270,513 _0268 Position (kb) 266 267 268Strain fitness (log2 ratio) -2 -1 0 1 2at 265.756 kb on - strand, within Dsui_0266at 265.882 kb on + strand, within Dsui_0266at 265.896 kb on - strand, within Dsui_0266at 265.933 kb on - strand, within Dsui_0266at 265.942 kb on + strand, within Dsui_0266at 265.986 kb on - strand, within Dsui_0266at 266.015 kb on + strand, within Dsui_0266at 266.015 kb on - strand, within Dsui_0266at 266.023 kb on - strand, within Dsui_0266at 266.048 kb on + strand, within Dsui_0266at 266.081 kb on - strand, within Dsui_0266at 266.132 kb on - strand, within Dsui_0266at 266.135 kb on + strandat 266.138 kb on - strand, within Dsui_0266at 266.224 kb on - strandat 266.287 kb on + strandat 266.297 kb on - strandat 266.328 kb on + strandat 266.328 kb on + strandat 266.336 kb on - strandat 266.361 kb on - strandat 266.362 kb on + strandat 266.660 kb on + strandat 266.665 kb on + strandat 266.724 kb on + strandat 266.724 kb on + strandat 266.951 kb on + strand, within Dsui_0267at 267.149 kb on + strand, within Dsui_0267at 267.202 kb on + strand, within Dsui_0267at 267.210 kb on - strandat 267.249 kb on + strand, within Dsui_0267at 267.249 kb on + strand, within Dsui_0267at 267.257 kb on - strand, within Dsui_0267at 267.264 kb on - strand, within Dsui_0267at 267.367 kb on + strand, within Dsui_0267at 267.434 kb on + strand, within Dsui_0267at 267.707 kb on + strandat 267.823 kb on - strandat 267.918 kb on - strandat 267.947 kb on - strandat 267.973 kb on + strandat 268.035 kb on - strand, within Dsui_0268at 268.047 kb on + strand, within Dsui_0268at 268.055 kb on - strandat 268.115 kb on - strandat 268.231 kb on + strand, within Dsui_0268at 268.353 kb on - strandat 268.478 kb on + strand, within Dsui_0268at 268.599 kb on - strand, within Dsui_0268

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)
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265,756 - Dsui_0266 0.23 -0.2
265,882 + Dsui_0266 0.41 +0.6
265,896 - Dsui_0266 0.43 -0.3
265,933 - Dsui_0266 0.49 -0.1
265,942 + Dsui_0266 0.50 -0.1
265,986 - Dsui_0266 0.56 -0.5
266,015 + Dsui_0266 0.61 -0.0
266,015 - Dsui_0266 0.61 -0.1
266,023 - Dsui_0266 0.62 -0.0
266,048 + Dsui_0266 0.65 -0.0
266,081 - Dsui_0266 0.70 +0.0
266,132 - Dsui_0266 0.78 -0.0
266,135 + -0.2
266,138 - Dsui_0266 0.79 -0.4
266,224 - -0.5
266,287 + -0.4
266,297 - +0.1
266,328 + -1.0
266,328 + +0.4
266,336 - +1.0
266,361 - -0.1
266,362 + -0.1
266,660 + -2.3
266,665 + -0.6
266,724 + +0.8
266,724 + +0.0
266,951 + Dsui_0267 0.23 +1.8
267,149 + Dsui_0267 0.43 -1.7
267,202 + Dsui_0267 0.49 -0.8
267,210 - +1.8
267,249 + Dsui_0267 0.53 +1.8
267,249 + Dsui_0267 0.53 -1.0
267,257 - Dsui_0267 0.54 +0.2
267,264 - Dsui_0267 0.55 -0.2
267,367 + Dsui_0267 0.65 +0.8
267,434 + Dsui_0267 0.72 -0.6
267,707 + -0.8
267,823 - +1.8
267,918 - +1.8
267,947 - +0.8
267,973 + +0.2
268,035 - Dsui_0268 0.10 +0.8
268,047 + Dsui_0268 0.11 +1.4
268,055 - +1.8
268,115 - +1.8
268,231 + Dsui_0268 0.17 +1.8
268,353 - +1.8
268,478 + Dsui_0268 0.26 +0.2
268,599 - Dsui_0268 0.31 +1.8

Or see this region's nucleotide sequence