Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0265 and Dsui_0266 overlap by 35 nucleotides Dsui_0266 and Dsui_0267 are separated by 438 nucleotides
Dsui_0265: Dsui_0265 - signal transduction histidine kinase, at 264,099 to 265,634
_0265
Dsui_0266: Dsui_0266 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 265,600 to 266,283
_0266
Dsui_0267: Dsui_0267 - multidrug resistance efflux pump, at 266,722 to 267,708
_0267
Position (kb) 265
266
267 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 264.679 kb on + strand, within Dsui_0265 at 264.718 kb on + strand, within Dsui_0265 at 264.764 kb on + strand, within Dsui_0265 at 264.813 kb on + strand, within Dsui_0265 at 264.988 kb on + strand, within Dsui_0265 at 265.028 kb on + strand, within Dsui_0265 at 265.041 kb on - strand, within Dsui_0265 at 265.079 kb on + strand, within Dsui_0265 at 265.087 kb on - strand, within Dsui_0265 at 265.104 kb on + strand, within Dsui_0265 at 265.121 kb on + strand, within Dsui_0265 at 265.205 kb on + strand, within Dsui_0265 at 265.264 kb on - strand, within Dsui_0265 at 265.413 kb on + strand at 265.464 kb on + strand, within Dsui_0265 at 265.656 kb on + strand at 265.713 kb on + strand, within Dsui_0266 at 265.713 kb on - strand, within Dsui_0266 at 265.756 kb on - strand, within Dsui_0266 at 265.882 kb on + strand, within Dsui_0266 at 265.896 kb on - strand, within Dsui_0266 at 265.933 kb on - strand, within Dsui_0266 at 265.942 kb on + strand, within Dsui_0266 at 265.986 kb on - strand, within Dsui_0266 at 266.015 kb on + strand, within Dsui_0266 at 266.015 kb on - strand, within Dsui_0266 at 266.023 kb on - strand, within Dsui_0266 at 266.048 kb on + strand, within Dsui_0266 at 266.081 kb on - strand, within Dsui_0266 at 266.132 kb on - strand, within Dsui_0266 at 266.135 kb on + strand at 266.138 kb on - strand, within Dsui_0266 at 266.224 kb on - strand at 266.287 kb on + strand at 266.297 kb on - strand at 266.328 kb on + strand at 266.328 kb on + strand at 266.336 kb on - strand at 266.361 kb on - strand at 266.362 kb on + strand at 266.660 kb on + strand at 266.665 kb on + strand at 266.724 kb on + strand at 266.724 kb on + strand at 266.951 kb on + strand, within Dsui_0267 at 267.149 kb on + strand, within Dsui_0267 at 267.202 kb on + strand, within Dsui_0267 at 267.210 kb on - strand at 267.249 kb on + strand, within Dsui_0267 at 267.249 kb on + strand, within Dsui_0267 at 267.257 kb on - strand, within Dsui_0267 at 267.264 kb on - strand, within Dsui_0267
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) remove 264,679 + Dsui_0265 0.38 -0.0 264,718 + Dsui_0265 0.40 +0.4 264,764 + Dsui_0265 0.43 -0.6 264,813 + Dsui_0265 0.46 +0.3 264,988 + Dsui_0265 0.58 -0.5 265,028 + Dsui_0265 0.60 -0.1 265,041 - Dsui_0265 0.61 +0.4 265,079 + Dsui_0265 0.64 -0.3 265,087 - Dsui_0265 0.64 +0.2 265,104 + Dsui_0265 0.65 -0.5 265,121 + Dsui_0265 0.67 -1.6 265,205 + Dsui_0265 0.72 +0.5 265,264 - Dsui_0265 0.76 -0.8 265,413 + -0.8 265,464 + Dsui_0265 0.89 +0.1 265,656 + -3.0 265,713 + Dsui_0266 0.17 +0.4 265,713 - Dsui_0266 0.17 -0.3 265,756 - Dsui_0266 0.23 -0.2 265,882 + Dsui_0266 0.41 +0.6 265,896 - Dsui_0266 0.43 -0.3 265,933 - Dsui_0266 0.49 -0.1 265,942 + Dsui_0266 0.50 -0.1 265,986 - Dsui_0266 0.56 -0.5 266,015 + Dsui_0266 0.61 -0.0 266,015 - Dsui_0266 0.61 -0.1 266,023 - Dsui_0266 0.62 -0.0 266,048 + Dsui_0266 0.65 -0.0 266,081 - Dsui_0266 0.70 +0.0 266,132 - Dsui_0266 0.78 -0.0 266,135 + -0.2 266,138 - Dsui_0266 0.79 -0.4 266,224 - -0.5 266,287 + -0.4 266,297 - +0.1 266,328 + -1.0 266,328 + +0.4 266,336 - +1.0 266,361 - -0.1 266,362 + -0.1 266,660 + -2.3 266,665 + -0.6 266,724 + +0.8 266,724 + +0.0 266,951 + Dsui_0267 0.23 +1.8 267,149 + Dsui_0267 0.43 -1.7 267,202 + Dsui_0267 0.49 -0.8 267,210 - +1.8 267,249 + Dsui_0267 0.53 +1.8 267,249 + Dsui_0267 0.53 -1.0 267,257 - Dsui_0267 0.54 +0.2 267,264 - Dsui_0267 0.55 -0.2
Or see this region's nucleotide sequence