Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34070

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
3,571,162	+				+0.2
3,571,170	-				+0.6
3,571,191	+				-1.4
3,571,281	+				+0.3
3,571,297	-				+0.1
3,571,297	-				-0.0
3,571,299	+				-0.6
3,571,335	+				-1.7
3,571,336	+				+1.5
3,571,336	+				+1.7
3,571,341	+				+1.4
3,571,412	+		PGA1_c34070	0.14	+0.1
3,571,470	+		PGA1_c34070	0.18	+0.6
3,571,470	-		PGA1_c34070	0.18	-0.3
3,571,526	+		PGA1_c34070	0.22	+0.8
3,571,628	+		PGA1_c34070	0.29	-0.3
3,571,636	-		PGA1_c34070	0.29	-1.1
3,571,636	-		PGA1_c34070	0.29	+3.4
3,571,636	-		PGA1_c34070	0.29	-1.9
3,571,638	+		PGA1_c34070	0.29	+4.3
3,571,638	+		PGA1_c34070	0.29	+0.2
3,571,646	-		PGA1_c34070	0.30	+0.3
3,571,646	-		PGA1_c34070	0.30	-0.6
3,571,667	+		PGA1_c34070	0.31	+0.5
3,571,696	-		PGA1_c34070	0.33	+1.1
3,571,718	-		PGA1_c34070	0.35	+0.1
3,571,731	+		PGA1_c34070	0.35	+1.0
3,571,767	+		PGA1_c34070	0.38	-1.8
3,571,767	+		PGA1_c34070	0.38	-0.3
3,571,767	+		PGA1_c34070	0.38	-2.1
3,571,767	+		PGA1_c34070	0.38	+2.1
3,571,767	+		PGA1_c34070	0.38	-1.0
3,571,775	-		PGA1_c34070	0.38	-1.3
3,571,804	-		PGA1_c34070	0.40	+0.7
3,571,850	+		PGA1_c34070	0.43	+0.2
3,571,850	-		PGA1_c34070	0.43	+0.6
3,571,850	-		PGA1_c34070	0.43	+0.1
3,571,858	-		PGA1_c34070	0.44	-1.9
3,571,941	+		PGA1_c34070	0.49	-1.9
3,571,958	+		PGA1_c34070	0.51	+0.2
3,572,028	+		PGA1_c34070	0.55	-2.7
3,572,038	+		PGA1_c34070	0.56	-1.4
3,572,068	-		PGA1_c34070	0.58	-0.3
3,572,086	+		PGA1_c34070	0.59	-2.6
3,572,096	+		PGA1_c34070	0.60	-3.3
3,572,101	+		PGA1_c34070	0.60	-0.2
3,572,104	-		PGA1_c34070	0.60	+2.2
3,572,124	+		PGA1_c34070	0.62	-2.1
3,572,124	+		PGA1_c34070	0.62	+1.0
3,572,127	+		PGA1_c34070	0.62	+0.7
3,572,135	-		PGA1_c34070	0.62	+1.1
3,572,142	+		PGA1_c34070	0.63	+1.8
3,572,150	-		PGA1_c34070	0.63	+0.4
3,572,186	+		PGA1_c34070	0.66	-1.1
3,572,186	+		PGA1_c34070	0.66	-0.1
3,572,194	-		PGA1_c34070	0.66	+2.2
3,572,194	-		PGA1_c34070	0.66	-0.1
3,572,195	-		PGA1_c34070	0.66	+0.4
3,572,195	-		PGA1_c34070	0.66	-0.0
3,572,196	+		PGA1_c34070	0.66	+0.1
3,572,196	+		PGA1_c34070	0.66	-0.4
3,572,196	+		PGA1_c34070	0.66	+1.4
3,572,196	+		PGA1_c34070	0.66	+1.8
3,572,196	+		PGA1_c34070	0.66	+1.5
3,572,196	+		PGA1_c34070	0.66	-0.3
3,572,204	-		PGA1_c34070	0.67	-1.9
3,572,204	-		PGA1_c34070	0.67	-1.1
3,572,206	+		PGA1_c34070	0.67	+2.2
3,572,240	+		PGA1_c34070	0.69	+1.0
3,572,248	-		PGA1_c34070	0.70	-2.3
3,572,261	+		PGA1_c34070	0.71	-2.5
3,572,263	+		PGA1_c34070	0.71	+0.2
3,572,286	+		PGA1_c34070	0.72	+0.8
3,572,286	+		PGA1_c34070	0.72	+0.6
3,572,296	+		PGA1_c34070	0.73	+1.1
3,572,296	+		PGA1_c34070	0.73	-0.2
3,572,296	+		PGA1_c34070	0.73	-0.8
3,572,296	+		PGA1_c34070	0.73	-0.1
3,572,301	+		PGA1_c34070	0.73	-2.1
3,572,301	+		PGA1_c34070	0.73	-0.6
3,572,304	-		PGA1_c34070	0.74	-0.4
3,572,354	+		PGA1_c34070	0.77	-1.4
3,572,369	+		PGA1_c34070	0.78	+1.5
3,572,369	+		PGA1_c34070	0.78	-0.9
3,572,377	-		PGA1_c34070	0.78	-2.5
3,572,377	-		PGA1_c34070	0.78	+1.5
3,572,377	-		PGA1_c34070	0.78	-0.8
3,572,379	+		PGA1_c34070	0.79	+0.5
3,572,428	+		PGA1_c34070	0.82	+0.1
3,572,429	+		PGA1_c34070	0.82	-0.1
3,572,437	-		PGA1_c34070	0.82	+0.7
3,572,459	+		PGA1_c34070	0.84	-0.5
3,572,479	-		PGA1_c34070	0.85	+2.8
3,572,481	+		PGA1_c34070	0.85	+0.6
3,572,538	+		PGA1_c34070	0.89	-0.4
3,572,546	-		PGA1_c34070	0.90	+1.2
3,572,582	+				-0.2
3,572,663	+				-1.0
3,572,677	+				-0.9
3,572,706	-				-1.2
3,572,748	+				+0.9
3,572,756	-				+2.8
3,572,787	-				+1.9
3,572,805	-				+1.4
3,572,906	+				-0.6
3,572,989	+		PGA1_c34080	0.18	-1.2
3,572,989	+		PGA1_c34080	0.18	+1.9
3,572,997	-		PGA1_c34080	0.19	+0.0
3,572,997	-		PGA1_c34080	0.19	-1.4
3,572,997	-		PGA1_c34080	0.19	+0.4
3,572,997	-		PGA1_c34080	0.19	+2.6
3,572,997	-		PGA1_c34080	0.19	+1.5
3,573,019	+		PGA1_c34080	0.22	+1.2
3,573,088	-		PGA1_c34080	0.29	+1.1
3,573,191	+		PGA1_c34080	0.40	+0.8
3,573,191	+		PGA1_c34080	0.40	+1.9
3,573,199	-		PGA1_c34080	0.41	+2.8
3,573,199	-		PGA1_c34080	0.41	+1.0
3,573,235	+		PGA1_c34080	0.45	+0.8
3,573,237	+		PGA1_c34080	0.45	-1.8
3,573,300	-		PGA1_c34080	0.52	-0.5
3,573,334	+		PGA1_c34080	0.55	+1.6
3,573,339	+		PGA1_c34080	0.56	+0.6
3,573,362	+		PGA1_c34080	0.58	+0.9
3,573,370	-		PGA1_c34080	0.59	+0.1
3,573,380	-		PGA1_c34080	0.60	+0.4
3,573,449	+		PGA1_c34080	0.68	-3.3
3,573,449	+		PGA1_c34080	0.68	+0.7
3,573,454	+		PGA1_c34080	0.68	+2.1
3,573,454	+		PGA1_c34080	0.68	-1.4
3,573,457	-		PGA1_c34080	0.68	+0.1
3,573,457	-		PGA1_c34080	0.68	+1.1
3,573,457	-		PGA1_c34080	0.68	-0.4
3,573,457	-		PGA1_c34080	0.68	-0.7
3,573,457	-		PGA1_c34080	0.68	-1.2
3,573,457	-		PGA1_c34080	0.68	-0.2
3,573,457	-		PGA1_c34080	0.68	-0.1
3,573,457	-		PGA1_c34080	0.68	+0.0
3,573,457	-		PGA1_c34080	0.68	+1.2
3,573,459	+		PGA1_c34080	0.69	-2.0
3,573,477	+		PGA1_c34080	0.71	-0.0
3,573,492	+		PGA1_c34080	0.72	+1.6
3,573,492	+		PGA1_c34080	0.72	+0.4
3,573,492	+		PGA1_c34080	0.72	+1.1
3,573,495	-		PGA1_c34080	0.72	-3.4
3,573,497	+		PGA1_c34080	0.73	-1.0
3,573,500	-		PGA1_c34080	0.73	-1.1
3,573,505	+		PGA1_c34080	0.74	-0.9
3,573,538	-		PGA1_c34080	0.77	-0.4
3,573,549	+		PGA1_c34080	0.78	+0.4
3,573,558	-		PGA1_c34080	0.79	+2.5
3,573,604	-		PGA1_c34080	0.84	-0.9
3,573,611	-		PGA1_c34080	0.85	-1.1
3,573,611	-		PGA1_c34080	0.85	-1.5
3,573,611	-		PGA1_c34080	0.85	-0.5
3,573,657	-		PGA1_c34080	0.90	-2.2