Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32800

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
3,438,103	-				+0.9
3,438,128	+				-1.7
3,438,150	+				+0.5
3,438,150	+				+1.8
3,438,169	+				+2.3
3,438,177	-		PGA1_c32790	0.10	+0.7
3,438,178	-		PGA1_c32790	0.10	+0.7
3,438,205	+		PGA1_c32790	0.13	-0.8
3,438,213	-		PGA1_c32790	0.14	-0.0
3,438,213	-		PGA1_c32790	0.14	-0.8
3,438,213	-		PGA1_c32790	0.14	-0.7
3,438,260	+		PGA1_c32790	0.19	-2.4
3,438,268	-		PGA1_c32790	0.19	-0.9
3,438,348	+		PGA1_c32790	0.28	-1.3
3,438,456	-		PGA1_c32790	0.38	-1.5
3,438,480	+		PGA1_c32790	0.41	+1.8
3,438,511	+		PGA1_c32790	0.44	+2.5
3,438,618	-		PGA1_c32790	0.55	-0.9
3,438,629	+		PGA1_c32790	0.56	-0.1
3,438,637	-		PGA1_c32790	0.57	-0.3
3,438,647	+		PGA1_c32790	0.58	-1.9
3,438,665	+		PGA1_c32790	0.60	-0.3
3,438,665	+		PGA1_c32790	0.60	-0.0
3,438,755	+		PGA1_c32790	0.69	-1.5
3,438,795	+		PGA1_c32790	0.73	+0.6
3,438,797	+		PGA1_c32790	0.73	-0.1
3,438,908	-		PGA1_c32790	0.84	-2.7
3,438,910	+		PGA1_c32790	0.84	-0.7
3,438,918	-		PGA1_c32790	0.85	+0.6
3,438,918	-		PGA1_c32790	0.85	-1.8
3,438,918	-		PGA1_c32790	0.85	+0.2
3,438,918	-		PGA1_c32790	0.85	-0.9
3,438,930	+		PGA1_c32790	0.86	+0.7
3,438,930	+		PGA1_c32790	0.86	-0.1
3,438,976	-				-0.8
3,438,986	+				-0.7
3,439,074	-				+0.3
3,439,100	-				-1.9
3,439,109	-				+0.7
3,439,148	-				+1.0
3,439,157	-				-1.2
3,439,208	+				-0.3
3,439,276	-				-0.9
3,439,335	+		PGA1_c32800	0.10	-1.0
3,439,376	-		PGA1_c32800	0.12	-1.6
3,439,381	-		PGA1_c32800	0.12	+1.0
3,439,439	+		PGA1_c32800	0.14	-1.4
3,439,439	+		PGA1_c32800	0.14	-2.4
3,439,565	+		PGA1_c32800	0.20	-1.8
3,439,573	-		PGA1_c32800	0.20	+0.3
3,439,587	+		PGA1_c32800	0.21	+0.7
3,439,587	+		PGA1_c32800	0.21	+0.1
3,439,595	-		PGA1_c32800	0.21	-2.2
3,439,595	-		PGA1_c32800	0.21	-0.9
3,439,595	-		PGA1_c32800	0.21	+0.3
3,439,595	-		PGA1_c32800	0.21	+0.7
3,439,596	-		PGA1_c32800	0.21	-0.5
3,439,673	+		PGA1_c32800	0.24	-1.6
3,439,712	+		PGA1_c32800	0.26	-1.0
3,439,796	+		PGA1_c32800	0.29	+0.2
3,439,796	+		PGA1_c32800	0.29	+0.6
3,439,796	+		PGA1_c32800	0.29	+0.5
3,439,796	+		PGA1_c32800	0.29	-1.8
3,439,796	+		PGA1_c32800	0.29	-1.4
3,439,796	+		PGA1_c32800	0.29	+0.4
3,439,804	-		PGA1_c32800	0.30	-1.9
3,439,804	-		PGA1_c32800	0.30	-1.5
3,439,804	-		PGA1_c32800	0.30	-1.6
3,439,804	-		PGA1_c32800	0.30	-1.7
3,439,804	-		PGA1_c32800	0.30	-0.5
3,439,804	-		PGA1_c32800	0.30	+1.0
3,439,822	-		PGA1_c32800	0.30	+1.2
3,439,931	+		PGA1_c32800	0.35	+1.3
3,440,038	+		PGA1_c32800	0.39	-1.4
3,440,043	+		PGA1_c32800	0.39	-0.9
3,440,051	-		PGA1_c32800	0.40	+0.3
3,440,086	+		PGA1_c32800	0.41	-1.9
3,440,196	-		PGA1_c32800	0.46	-2.4
3,440,216	-		PGA1_c32800	0.47	-1.0
3,440,223	+		PGA1_c32800	0.47	-0.3
3,440,299	+		PGA1_c32800	0.50	-0.5
3,440,305	-		PGA1_c32800	0.50	-1.9
3,440,305	-		PGA1_c32800	0.50	-1.6
3,440,317	-		PGA1_c32800	0.51	-3.2
3,440,322	-		PGA1_c32800	0.51	-1.2
3,440,360	-		PGA1_c32800	0.53	-1.6
3,440,360	-		PGA1_c32800	0.53	+0.2
3,440,360	-		PGA1_c32800	0.53	+1.6
3,440,380	+		PGA1_c32800	0.53	-1.9
3,440,388	-		PGA1_c32800	0.54	+0.9
3,440,389	-		PGA1_c32800	0.54	+0.6
3,440,433	-		PGA1_c32800	0.56	-1.8
3,440,459	+		PGA1_c32800	0.57	-0.9
3,440,557	+		PGA1_c32800	0.61	-1.2
3,440,615	+		PGA1_c32800	0.63	-0.7
3,440,663	+		PGA1_c32800	0.65	-1.0
3,440,706	+		PGA1_c32800	0.67	+1.1
3,440,714	-		PGA1_c32800	0.67	+0.6
3,440,773	+		PGA1_c32800	0.70	+2.1
3,440,773	+		PGA1_c32800	0.70	+0.5
3,440,796	+		PGA1_c32800	0.71	+2.3
3,440,796	+		PGA1_c32800	0.71	-0.5
3,440,796	+		PGA1_c32800	0.71	-1.9
3,440,796	+		PGA1_c32800	0.71	+1.0
3,440,796	+		PGA1_c32800	0.71	+1.4
3,440,804	-		PGA1_c32800	0.71	-0.9
3,440,804	-		PGA1_c32800	0.71	+0.8
3,440,804	-		PGA1_c32800	0.71	+0.6
3,440,804	-		PGA1_c32800	0.71	+1.7
3,440,966	+		PGA1_c32800	0.78	-0.3
3,440,966	+		PGA1_c32800	0.78	-1.2
3,440,967	+		PGA1_c32800	0.78	-1.1
3,440,998	-		PGA1_c32800	0.79	-1.7
3,440,998	-		PGA1_c32800	0.79	+1.1
3,441,108	-		PGA1_c32800	0.84	-0.0
3,441,114	+		PGA1_c32800	0.84	-0.3
3,441,119	+		PGA1_c32800	0.84	+2.6
3,441,128	+		PGA1_c32800	0.85	+0.8
3,441,131	-		PGA1_c32800	0.85	-1.6
3,441,166	+		PGA1_c32800	0.86	+0.8
3,441,189	+		PGA1_c32800	0.87	+0.1
3,441,189	-		PGA1_c32800	0.87	-0.1
3,441,197	-		PGA1_c32800	0.87	+1.4
3,441,255	-		PGA1_c32800	0.90	-0.3
3,441,324	+				+0.8
3,441,340	+				+0.4
3,441,340	+				+0.0
3,441,340	+				-0.9
3,441,348	-				+0.6
3,441,368	+				-3.7
3,441,419	+				+0.1
3,441,424	+				-1.0
3,441,427	-				-2.9
3,441,429	+				-0.3
3,441,457	+				+0.4
3,441,504	+				-2.5
3,441,513	+				-0.3
3,441,521	-				+0.4
3,441,521	-				+1.6
3,441,521	-				+0.3
3,441,589	+				+0.8
3,441,589	+				+0.0
3,441,589	+				-1.0
3,441,589	+				+1.1
3,441,594	+				-2.0
3,441,597	-				-1.7
3,441,609	+				+1.2
3,441,617	+				-0.7
3,441,617	+				+0.3
3,441,617	+				-0.8
3,441,625	-				-0.7
3,441,625	-				+0.5
3,441,646	-				-1.2
3,441,704	+				+0.5
3,441,711	+				-0.9
3,441,712	-				-2.2
3,441,712	-				-1.7
3,441,712	-				-2.3
3,441,725	-				-2.4
3,441,790	-		PGA1_c32810	0.15	+2.1
3,441,803	-		PGA1_c32810	0.16	-2.0
3,441,829	+		PGA1_c32810	0.17	-0.3
3,441,829	+		PGA1_c32810	0.17	-0.2
3,441,830	+		PGA1_c32810	0.18	-0.4
3,441,837	-		PGA1_c32810	0.18	+0.3
3,441,838	-		PGA1_c32810	0.18	-1.9
3,441,925	-		PGA1_c32810	0.25	+0.7
3,441,947	+		PGA1_c32810	0.26	-1.9
3,441,949	+		PGA1_c32810	0.27	+1.0
3,441,950	-		PGA1_c32810	0.27	+1.3
3,441,972	+		PGA1_c32810	0.28	-1.6
3,441,980	-		PGA1_c32810	0.29	-2.0
3,441,980	-		PGA1_c32810	0.29	+1.2
3,441,990	-		PGA1_c32810	0.30	+0.5
3,441,992	+		PGA1_c32810	0.30	+0.6
3,441,997	+		PGA1_c32810	0.30	-0.9
3,442,000	-		PGA1_c32810	0.30	+0.4
3,442,010	-		PGA1_c32810	0.31	-0.7
3,442,020	+		PGA1_c32810	0.32	-0.2
3,442,020	+		PGA1_c32810	0.32	-0.0
3,442,029	+		PGA1_c32810	0.33	-2.2
3,442,118	+		PGA1_c32810	0.39	+0.5
3,442,191	-		PGA1_c32810	0.45	+1.5
3,442,273	+		PGA1_c32810	0.51	+0.6
3,442,345	+		PGA1_c32810	0.57	+0.5
3,442,416	-		PGA1_c32810	0.62	+1.9
3,442,472	+		PGA1_c32810	0.66	+0.2