Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31340

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
3,274,156	-		PGA1_c31330	0.49	-2.1
3,274,156	-		PGA1_c31330	0.49	+1.4
3,274,156	-		PGA1_c31330	0.49	+0.4
3,274,171	+		PGA1_c31330	0.50	+0.6
3,274,180	-		PGA1_c31330	0.51	-2.5
3,274,194	-		PGA1_c31330	0.52	-1.6
3,274,194	-		PGA1_c31330	0.52	+0.4
3,274,240	+		PGA1_c31330	0.54	-0.6
3,274,245	+		PGA1_c31330	0.55	-0.6
3,274,250	+		PGA1_c31330	0.55	-2.0
3,274,250	+		PGA1_c31330	0.55	+1.0
3,274,250	+		PGA1_c31330	0.55	+2.8
3,274,250	+		PGA1_c31330	0.55	+0.3
3,274,256	+		PGA1_c31330	0.55	+2.0
3,274,258	-		PGA1_c31330	0.55	+0.2
3,274,258	-		PGA1_c31330	0.55	-1.2
3,274,264	-		PGA1_c31330	0.56	-1.3
3,274,266	+		PGA1_c31330	0.56	-2.0
3,274,266	+		PGA1_c31330	0.56	+0.7
3,274,266	+		PGA1_c31330	0.56	+0.2
3,274,274	-		PGA1_c31330	0.56	+1.7
3,274,274	-		PGA1_c31330	0.56	-1.5
3,274,274	-		PGA1_c31330	0.56	+2.0
3,274,274	-		PGA1_c31330	0.56	-1.2
3,274,274	-		PGA1_c31330	0.56	+0.8
3,274,274	-		PGA1_c31330	0.56	+1.6
3,274,292	-		PGA1_c31330	0.57	+1.0
3,274,293	+		PGA1_c31330	0.58	-1.2
3,274,293	+		PGA1_c31330	0.58	-1.6
3,274,301	-		PGA1_c31330	0.58	+0.1
3,274,319	+		PGA1_c31330	0.59	+0.3
3,274,333	-		PGA1_c31330	0.60	-1.6
3,274,366	+		PGA1_c31330	0.62	-1.7
3,274,374	-		PGA1_c31330	0.62	+0.4
3,274,401	+		PGA1_c31330	0.64	-2.5
3,274,415	-		PGA1_c31330	0.65	+0.2
3,274,415	-		PGA1_c31330	0.65	+1.6
3,274,417	+		PGA1_c31330	0.65	-0.7
3,274,431	+		PGA1_c31330	0.66	+0.4
3,274,439	-		PGA1_c31330	0.66	-1.4
3,274,439	-		PGA1_c31330	0.66	-2.3
3,274,441	+		PGA1_c31330	0.66	-0.8
3,274,441	-		PGA1_c31330	0.66	-1.2
3,274,441	-		PGA1_c31330	0.66	-1.6
3,274,449	-		PGA1_c31330	0.67	-2.1
3,274,449	-		PGA1_c31330	0.67	-2.1
3,274,461	-		PGA1_c31330	0.68	+2.0
3,274,492	-		PGA1_c31330	0.69	-1.2
3,274,591	+		PGA1_c31330	0.75	-1.2
3,274,608	-		PGA1_c31330	0.76	+0.2
3,274,634	+		PGA1_c31330	0.78	-0.5
3,274,634	+		PGA1_c31330	0.78	+0.2
3,274,666	-		PGA1_c31330	0.80	-1.6
3,274,674	+		PGA1_c31330	0.80	+0.4
3,274,684	+		PGA1_c31330	0.81	+1.2
3,274,701	-		PGA1_c31330	0.82	+1.2
3,274,723	+		PGA1_c31330	0.83	-1.4
3,274,723	+		PGA1_c31330	0.83	+0.3
3,274,723	+		PGA1_c31330	0.83	+0.7
3,274,723	+		PGA1_c31330	0.83	+0.1
3,274,731	-		PGA1_c31330	0.84	-1.7
3,274,743	-		PGA1_c31330	0.84	+1.0
3,274,839	+				+0.6
3,274,839	+				+1.6
3,274,847	-				+0.1
3,274,861	-				+1.1
3,274,863	+				+0.3
3,274,868	+				+1.1
3,274,871	-				-1.5
3,274,883	+				-1.3
3,274,905	+				+0.3
3,274,905	+				-1.2
3,274,913	-				-0.3
3,274,913	-				+0.3
3,274,944	-				+1.0
3,275,069	+				+1.6
3,275,069	+				-0.8
3,275,077	-				-1.4
3,275,088	+				+2.3
3,275,088	+				+0.9
3,275,088	+				-1.6
3,275,088	+				-1.4
3,275,091	-				+2.4
3,275,096	-				-1.2
3,275,173	+				+0.0
3,275,176	-				+1.3
3,275,187	-		PGA1_c31340	0.10	+0.1
3,275,203	-		PGA1_c31340	0.12	-0.2
3,275,203	-		PGA1_c31340	0.12	-1.3
3,275,245	+		PGA1_c31340	0.17	-0.1
3,275,253	-		PGA1_c31340	0.18	-0.8
3,275,253	-		PGA1_c31340	0.18	+0.9
3,275,253	-		PGA1_c31340	0.18	-2.9
3,275,302	-		PGA1_c31340	0.24	-0.4
3,275,311	-		PGA1_c31340	0.25	-2.5
3,275,360	-		PGA1_c31340	0.31	-0.6
3,275,370	+		PGA1_c31340	0.32	+0.1
3,275,372	+		PGA1_c31340	0.32	-1.7
3,275,372	+		PGA1_c31340	0.32	+0.1
3,275,372	+		PGA1_c31340	0.32	-0.6
3,275,372	+		PGA1_c31340	0.32	-0.4
3,275,372	+		PGA1_c31340	0.32	-1.9
3,275,380	-		PGA1_c31340	0.33	-0.4
3,275,380	-		PGA1_c31340	0.33	-0.7
3,275,380	-		PGA1_c31340	0.33	-2.3
3,275,380	-		PGA1_c31340	0.33	+0.5
3,275,380	-		PGA1_c31340	0.33	+1.6
3,275,381	+		PGA1_c31340	0.33	-0.8
3,275,409	+		PGA1_c31340	0.37	+0.3
3,275,417	-		PGA1_c31340	0.38	+1.2
3,275,444	+		PGA1_c31340	0.41	-0.1
3,275,494	-		PGA1_c31340	0.47	-1.0
3,275,494	-		PGA1_c31340	0.47	+0.2
3,275,535	+		PGA1_c31340	0.52	+0.6
3,275,540	+		PGA1_c31340	0.52	+0.2
3,275,540	+		PGA1_c31340	0.52	+1.3
3,275,543	-		PGA1_c31340	0.53	-1.5
3,275,599	-		PGA1_c31340	0.59	-1.7
3,275,624	-		PGA1_c31340	0.62	-0.4
3,275,652	+		PGA1_c31340	0.66	-1.6
3,275,684	+		PGA1_c31340	0.70	-2.2
3,275,768	+		PGA1_c31340	0.80	-2.0
3,275,776	+		PGA1_c31340	0.81	-0.2
3,275,785	-		PGA1_c31340	0.82	-0.1
3,275,786	-		PGA1_c31340	0.82	+0.9
3,275,793	+		PGA1_c31340	0.83	-0.2
3,275,801	-		PGA1_c31340	0.84	-0.6
3,275,808	-		PGA1_c31340	0.84	-2.4
3,275,835	+		PGA1_c31340	0.88	+1.4
3,275,841	+		PGA1_c31340	0.88	-0.8
3,275,841	+		PGA1_c31340	0.88	+1.3
3,275,849	-		PGA1_c31340	0.89	+0.4
3,275,851	+		PGA1_c31340	0.89	+0.2
3,275,851	+		PGA1_c31340	0.89	-1.5
3,275,851	+		PGA1_c31340	0.89	+0.6
3,275,851	+		PGA1_c31340	0.89	+0.3
3,275,851	+		PGA1_c31340	0.89	-1.3
3,275,859	-				+0.4
3,275,859	-				-0.7
3,275,859	-				-2.9
3,275,859	-				+0.2
3,275,859	-				-0.0
3,275,859	-				+1.4
3,275,859	-				-1.9
3,275,859	-				+0.3
3,275,859	-				+0.4
3,275,863	+				-1.4
3,275,871	-				+0.0
3,275,882	+				-0.6
3,275,882	+				+1.9
3,275,882	+				-1.6
3,275,931	+				+0.7
3,275,939	-				-0.0
3,275,946	+				-0.5
3,275,951	+				-0.8
3,275,951	+				+0.7
3,275,951	+				+1.3
3,275,951	+				-4.0
3,275,951	+				-2.6
3,275,951	+				+0.7
3,275,951	+				+1.2
3,275,951	+				-1.4
3,275,951	+				-0.6
3,275,951	+				+0.8
3,275,954	-				+0.5
3,275,959	-				-0.2
3,275,959	-				-0.1
3,275,959	-				+0.9
3,275,959	-				+0.5
3,275,959	-				-2.7
3,275,962	-				-0.9
3,275,977	+				+1.7
3,275,977	+				+0.1
3,275,977	+				+2.8
3,275,977	+				+0.6
3,275,985	-				+0.4
3,275,985	-				+0.2
3,276,039	+				-1.3
3,276,039	+				-1.7
3,276,048	+				+0.1
3,276,048	+				+1.2
3,276,048	+				-0.8
3,276,056	-				-1.4
3,276,058	+				+1.3
3,276,123	+				+1.1
3,276,127	-				-1.6
3,276,135	+				-0.0
3,276,135	+				+0.2
3,276,135	+				-1.5
3,276,135	+				+0.6
3,276,135	+				-2.8
3,276,135	+				+0.3
3,276,135	+				+1.9
3,276,135	+				+0.7
3,276,143	-				+0.3
3,276,143	-				-2.5
3,276,143	-				-1.8
3,276,143	-				+2.9
3,276,143	-				-1.2
3,276,143	-				-0.1
3,276,143	-				-0.6
3,276,143	-				-0.7
3,276,143	-				-0.3
3,276,143	-				-1.6
3,276,143	-				-0.0
3,276,143	-				-0.6
3,276,145	+				+0.8
3,276,145	+				+2.6
3,276,150	+				-1.7
3,276,150	+				-1.3
3,276,153	-				+0.0
3,276,158	-				+1.1
3,276,158	-				+0.0
3,276,186	-				+2.3
3,276,186	-				+1.9
3,276,221	+				+2.9
3,276,225	+				-1.5
3,276,228	-				-1.2
3,276,229	-				-0.6
3,276,252	-				+1.4
3,276,289	-		PGA1_c31350	0.10	-0.2
3,276,291	+		PGA1_c31350	0.11	-0.3
3,276,309	+		PGA1_c31350	0.12	-0.6
3,276,309	+		PGA1_c31350	0.12	-1.9
3,276,309	+		PGA1_c31350	0.12	-0.8
3,276,317	-		PGA1_c31350	0.12	-1.7
3,276,317	-		PGA1_c31350	0.12	-0.1
3,276,317	-		PGA1_c31350	0.12	+0.8
3,276,317	-		PGA1_c31350	0.12	-3.2
3,276,317	-		PGA1_c31350	0.12	-0.0
3,276,317	-		PGA1_c31350	0.12	+0.7
3,276,358	+		PGA1_c31350	0.15	-0.6
3,276,365	+		PGA1_c31350	0.15	-0.6
3,276,393	+		PGA1_c31350	0.17	+1.1
3,276,393	+		PGA1_c31350	0.17	-1.7
3,276,401	-		PGA1_c31350	0.17	-0.3
3,276,401	-		PGA1_c31350	0.17	+1.5
3,276,411	-		PGA1_c31350	0.18	+0.5
3,276,411	-		PGA1_c31350	0.18	-0.7
3,276,411	-		PGA1_c31350	0.18	-0.4
3,276,447	-		PGA1_c31350	0.20	-2.1
3,276,448	-		PGA1_c31350	0.20	+0.9
3,276,516	+		PGA1_c31350	0.25	-1.9
3,276,516	+		PGA1_c31350	0.25	-0.8
3,276,516	+		PGA1_c31350	0.25	+0.9
3,276,564	-		PGA1_c31350	0.28	+0.3
3,276,592	-		PGA1_c31350	0.30	+1.0
3,276,618	-		PGA1_c31350	0.31	-2.1
3,276,667	+		PGA1_c31350	0.34	-1.7
3,276,667	+		PGA1_c31350	0.34	-0.2
3,276,667	+		PGA1_c31350	0.34	+0.9
3,276,675	-		PGA1_c31350	0.35	-2.4
3,276,690	-		PGA1_c31350	0.36	-0.4
3,276,742	+		PGA1_c31350	0.39	+1.7
3,276,750	-		PGA1_c31350	0.40	+1.3
3,276,755	+		PGA1_c31350	0.40	+1.5
3,276,755	+		PGA1_c31350	0.40	+0.1
3,276,755	+		PGA1_c31350	0.40	-0.5
3,276,763	-		PGA1_c31350	0.40	+0.4
3,276,771	+		PGA1_c31350	0.41	+1.2
3,276,857	+		PGA1_c31350	0.46	+2.4
3,276,902	+		PGA1_c31350	0.49	-2.0