Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2794 and Dshi_2795 are separated by 6 nucleotides Dshi_2795 and Dshi_2796 are separated by 6 nucleotides Dshi_2796 and Dshi_2797 are separated by 125 nucleotides
Dshi_2794: Dshi_2794 - hypothetical protein (RefSeq), at 2,953,140 to 2,954,270
_2794
Dshi_2795: Dshi_2795 - hypothetical protein (RefSeq), at 2,954,277 to 2,955,392
_2795
Dshi_2796: Dshi_2796 - heat shock protein Hsp20 (RefSeq), at 2,955,399 to 2,955,857
_2796
Dshi_2797: Dshi_2797 - Fructokinase (EC 2.7.1.4) (from data) , at 2,955,983 to 2,956,909
_2797
Position (kb)
2954
2955
2956 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2953.365 kb on + strand, within Dshi_2794 at 2953.377 kb on + strand, within Dshi_2794 at 2953.445 kb on + strand, within Dshi_2794 at 2953.517 kb on - strand, within Dshi_2794 at 2953.542 kb on - strand, within Dshi_2794 at 2953.605 kb on + strand, within Dshi_2794 at 2953.712 kb on + strand, within Dshi_2794 at 2953.826 kb on - strand, within Dshi_2794 at 2953.842 kb on + strand, within Dshi_2794 at 2954.048 kb on + strand, within Dshi_2794 at 2954.233 kb on - strand at 2954.352 kb on + strand at 2954.444 kb on - strand, within Dshi_2795 at 2954.456 kb on + strand, within Dshi_2795 at 2954.510 kb on + strand, within Dshi_2795 at 2954.511 kb on + strand, within Dshi_2795 at 2954.636 kb on + strand, within Dshi_2795 at 2954.655 kb on - strand, within Dshi_2795 at 2954.678 kb on + strand, within Dshi_2795 at 2954.702 kb on + strand, within Dshi_2795 at 2954.710 kb on - strand, within Dshi_2795 at 2954.715 kb on + strand, within Dshi_2795 at 2954.774 kb on + strand, within Dshi_2795 at 2954.775 kb on + strand, within Dshi_2795 at 2954.831 kb on + strand, within Dshi_2795 at 2954.868 kb on - strand, within Dshi_2795 at 2954.906 kb on + strand, within Dshi_2795 at 2955.033 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.056 kb on + strand, within Dshi_2795 at 2955.072 kb on - strand, within Dshi_2795 at 2955.196 kb on + strand, within Dshi_2795 at 2955.361 kb on + strand at 2955.624 kb on + strand, within Dshi_2796 at 2955.633 kb on + strand, within Dshi_2796 at 2955.677 kb on + strand, within Dshi_2796 at 2955.690 kb on + strand, within Dshi_2796 at 2955.705 kb on - strand, within Dshi_2796 at 2955.777 kb on - strand, within Dshi_2796 at 2955.792 kb on - strand, within Dshi_2796 at 2955.836 kb on - strand at 2955.972 kb on - strand at 2956.091 kb on - strand, within Dshi_2797 at 2956.115 kb on + strand, within Dshi_2797 at 2956.187 kb on + strand, within Dshi_2797 at 2956.350 kb on - strand, within Dshi_2797
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,953,365 + Dshi_2794 0.20 +0.4 2,953,377 + Dshi_2794 0.21 +0.2 2,953,445 + Dshi_2794 0.27 +1.4 2,953,517 - Dshi_2794 0.33 -0.8 2,953,542 - Dshi_2794 0.36 +0.1 2,953,605 + Dshi_2794 0.41 +1.1 2,953,712 + Dshi_2794 0.51 -0.3 2,953,826 - Dshi_2794 0.61 +0.4 2,953,842 + Dshi_2794 0.62 +0.1 2,954,048 + Dshi_2794 0.80 +0.5 2,954,233 - -0.0 2,954,352 + -0.2 2,954,444 - Dshi_2795 0.15 -1.2 2,954,456 + Dshi_2795 0.16 -0.3 2,954,510 + Dshi_2795 0.21 +0.1 2,954,511 + Dshi_2795 0.21 +1.2 2,954,636 + Dshi_2795 0.32 -1.1 2,954,655 - Dshi_2795 0.34 -0.4 2,954,678 + Dshi_2795 0.36 +0.6 2,954,702 + Dshi_2795 0.38 -0.3 2,954,710 - Dshi_2795 0.39 -0.6 2,954,715 + Dshi_2795 0.39 -0.9 2,954,774 + Dshi_2795 0.45 -0.2 2,954,775 + Dshi_2795 0.45 -0.7 2,954,831 + Dshi_2795 0.50 +0.1 2,954,868 - Dshi_2795 0.53 -0.3 2,954,906 + Dshi_2795 0.56 +0.2 2,955,033 - Dshi_2795 0.68 +0.0 2,955,052 - Dshi_2795 0.69 -0.7 2,955,052 - Dshi_2795 0.69 -0.5 2,955,056 + Dshi_2795 0.70 +1.8 2,955,072 - Dshi_2795 0.71 +1.2 2,955,196 + Dshi_2795 0.82 +0.2 2,955,361 + +1.3 2,955,624 + Dshi_2796 0.49 -0.2 2,955,633 + Dshi_2796 0.51 +0.2 2,955,677 + Dshi_2796 0.61 -0.8 2,955,690 + Dshi_2796 0.63 -0.3 2,955,705 - Dshi_2796 0.67 -1.6 2,955,777 - Dshi_2796 0.82 +1.0 2,955,792 - Dshi_2796 0.86 +0.4 2,955,836 - -0.2 2,955,972 - -0.1 2,956,091 - Dshi_2797 0.12 -0.0 2,956,115 + Dshi_2797 0.14 +1.0 2,956,187 + Dshi_2797 0.22 -0.2 2,956,350 - Dshi_2797 0.40 -1.8
Or see this region's nucleotide sequence