Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33730

Experiment: m-Inositol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m-Inositol (C)
3,535,075	+				-3.3
3,535,084	-				-2.0
3,535,094	-				+1.8
3,535,094	-				+0.5
3,535,103	+				+2.0
3,535,111	-				+0.9
3,535,133	+				+0.1
3,535,133	+				-0.1
3,535,133	+				+2.8
3,535,133	+				+0.6
3,535,171	-		PGA1_c33720	0.12	-1.1
3,535,208	-		PGA1_c33720	0.16	-1.2
3,535,273	+		PGA1_c33720	0.22	+1.1
3,535,398	+		PGA1_c33720	0.35	+0.2
3,535,398	+		PGA1_c33720	0.35	-0.7
3,535,441	-		PGA1_c33720	0.39	-2.1
3,535,445	-		PGA1_c33720	0.39	+1.0
3,535,445	-		PGA1_c33720	0.39	-0.5
3,535,487	-		PGA1_c33720	0.43	-1.2
3,535,495	+		PGA1_c33720	0.44	-0.6
3,535,513	+		PGA1_c33720	0.46	+0.7
3,535,517	+		PGA1_c33720	0.46	-0.3
3,535,622	-		PGA1_c33720	0.57	+0.6
3,535,646	-		PGA1_c33720	0.59	-1.1
3,535,646	-		PGA1_c33720	0.59	-0.6
3,535,697	-		PGA1_c33720	0.64	+0.8
3,535,708	-		PGA1_c33720	0.65	-2.1
3,535,762	+		PGA1_c33720	0.70	+1.7
3,535,803	+		PGA1_c33720	0.74	+2.1
3,535,830	-		PGA1_c33720	0.77	+1.4
3,535,835	-		PGA1_c33720	0.78	+1.0
3,535,836	-		PGA1_c33720	0.78	+0.1
3,535,880	+		PGA1_c33720	0.82	+1.2
3,535,881	+		PGA1_c33720	0.82	+0.8
3,535,894	+		PGA1_c33720	0.83	-0.0
3,535,903	-		PGA1_c33720	0.84	-2.2
3,535,915	+		PGA1_c33720	0.86	+0.8
3,535,925	+		PGA1_c33720	0.86	+1.2
3,535,933	-		PGA1_c33720	0.87	+1.6
3,535,933	-		PGA1_c33720	0.87	-2.8
3,535,933	-		PGA1_c33720	0.87	-0.9
3,535,938	-		PGA1_c33720	0.88	+1.4
3,535,959	+		PGA1_c33720	0.90	+0.1
3,535,961	+				-0.3
3,535,991	-				-2.2
3,536,013	-				+1.7
3,536,015	+				+1.9
3,536,015	+				+0.3
3,536,023	-				-1.2
3,536,082	-				-1.3
3,536,128	-				+0.9
3,536,128	-				+0.6
3,536,145	+		PGA1_c33730	0.11	+0.9
3,536,165	+		PGA1_c33730	0.14	+0.9
3,536,246	-		PGA1_c33730	0.25	+1.2
3,536,248	+		PGA1_c33730	0.26	+2.7
3,536,251	-		PGA1_c33730	0.26	-2.7
3,536,282	+		PGA1_c33730	0.30	+0.5
3,536,290	-		PGA1_c33730	0.31	-1.1
3,536,291	-		PGA1_c33730	0.32	-0.4
3,536,291	-		PGA1_c33730	0.32	-1.0
3,536,309	+		PGA1_c33730	0.34	+0.9
3,536,317	+		PGA1_c33730	0.35	+1.9
3,536,329	+		PGA1_c33730	0.37	+0.6
3,536,329	+		PGA1_c33730	0.37	+1.8
3,536,329	+		PGA1_c33730	0.37	+0.3
3,536,329	+		PGA1_c33730	0.37	-0.4
3,536,332	-		PGA1_c33730	0.37	-1.5
3,536,337	-		PGA1_c33730	0.38	+0.9
3,536,337	-		PGA1_c33730	0.38	+0.2
3,536,337	-		PGA1_c33730	0.38	-0.1
3,536,354	+		PGA1_c33730	0.40	+0.9
3,536,362	-		PGA1_c33730	0.41	+2.0
3,536,423	+		PGA1_c33730	0.50	+0.1
3,536,431	-		PGA1_c33730	0.51	-2.2
3,536,452	-		PGA1_c33730	0.54	+1.0
3,536,459	+		PGA1_c33730	0.55	+0.7
3,536,468	+		PGA1_c33730	0.56	+0.1
3,536,468	+		PGA1_c33730	0.56	-0.9
3,536,468	+		PGA1_c33730	0.56	-1.2
3,536,470	+		PGA1_c33730	0.56	+0.5
3,536,476	-		PGA1_c33730	0.57	+0.4
3,536,476	-		PGA1_c33730	0.57	+1.7
3,536,478	+		PGA1_c33730	0.58	+0.6
3,536,486	-		PGA1_c33730	0.59	+0.0
3,536,497	-		PGA1_c33730	0.60	+0.7
3,536,542	-		PGA1_c33730	0.67	+1.2
3,536,606	-		PGA1_c33730	0.75	+1.8
3,536,609	+		PGA1_c33730	0.76	-0.1
3,536,609	+		PGA1_c33730	0.76	-0.4
3,536,612	+		PGA1_c33730	0.76	+1.2
3,536,637	-		PGA1_c33730	0.80	-2.0
3,536,664	+		PGA1_c33730	0.84	-0.4
3,536,684	+		PGA1_c33730	0.86	-2.0
3,536,789	+				-0.1
3,536,792	-				-0.7
3,536,840	+				-1.7
3,536,840	+				+2.8
3,536,840	+				+0.6
3,536,846	-				+1.0
3,536,848	-				+0.7
3,536,848	-				-0.7
3,536,848	-				-0.9
3,536,848	-				+0.3
3,536,848	-				-1.5
3,536,848	-				+0.6
3,536,848	-				+0.7
3,536,848	-				-1.1
3,536,848	-				+1.2
3,536,848	-				-1.2
3,536,848	-				-2.2
3,536,848	-				+0.3
3,536,854	+				-2.5
3,536,859	+				+0.5
3,536,859	+				+0.0
3,536,867	+				-2.7
3,536,867	-				-0.1
3,536,875	-				-1.0
3,536,925	+				+0.5
3,536,929	-				+1.1
3,536,941	-				+0.7
3,537,032	+				+0.7
3,537,032	+				+0.5
3,537,037	+				+0.3
3,537,037	+				-0.3
3,537,037	+				-2.2
3,537,037	+				-0.7
3,537,040	-				-0.1
3,537,057	+				-0.3
3,537,057	+				-1.4
3,537,065	-				+1.1
3,537,065	-				+1.0
3,537,065	-				-1.2
3,537,181	+		PGA1_c33740	0.22	+0.5
3,537,201	-		PGA1_c33740	0.24	+0.2
3,537,218	+		PGA1_c33740	0.26	-0.7
3,537,225	+		PGA1_c33740	0.27	+2.2
3,537,226	+		PGA1_c33740	0.27	+1.1
3,537,231	+		PGA1_c33740	0.28	+0.7
3,537,234	-		PGA1_c33740	0.28	+0.2
3,537,236	+		PGA1_c33740	0.28	+1.9
3,537,238	-		PGA1_c33740	0.28	-1.7
3,537,307	+		PGA1_c33740	0.36	-2.4
3,537,313	+		PGA1_c33740	0.37	+0.6
3,537,313	+		PGA1_c33740	0.37	+0.4
3,537,321	-		PGA1_c33740	0.38	+0.3
3,537,361	-		PGA1_c33740	0.42	+1.0
3,537,368	+		PGA1_c33740	0.43	+0.9
3,537,403	-		PGA1_c33740	0.47	-0.7
3,537,438	+		PGA1_c33740	0.51	+1.9
3,537,438	+		PGA1_c33740	0.51	+0.9
3,537,438	+		PGA1_c33740	0.51	-0.1
3,537,446	-		PGA1_c33740	0.52	+0.6
3,537,456	-		PGA1_c33740	0.53	-0.1
3,537,463	-		PGA1_c33740	0.54	-3.1
3,537,463	-		PGA1_c33740	0.54	-0.7
3,537,463	-		PGA1_c33740	0.54	-0.9
3,537,468	+		PGA1_c33740	0.54	+0.1
3,537,468	+		PGA1_c33740	0.54	+1.3
3,537,469	-		PGA1_c33740	0.55	+2.1
3,537,471	+		PGA1_c33740	0.55	+1.2
3,537,476	-		PGA1_c33740	0.55	+0.5
3,537,476	-		PGA1_c33740	0.55	-0.1
3,537,476	-		PGA1_c33740	0.55	-0.8
3,537,476	-		PGA1_c33740	0.55	-1.4
3,537,476	-		PGA1_c33740	0.55	-0.7
3,537,476	-		PGA1_c33740	0.55	+0.4
3,537,479	+		PGA1_c33740	0.56	+1.0
3,537,479	+		PGA1_c33740	0.56	+1.4
3,537,479	+		PGA1_c33740	0.56	-2.3
3,537,487	-		PGA1_c33740	0.57	+0.3
3,537,506	-		PGA1_c33740	0.59	+1.4
3,537,506	-		PGA1_c33740	0.59	+1.8
3,537,607	+		PGA1_c33740	0.70	-1.2
3,537,615	-		PGA1_c33740	0.71	+2.5
3,537,627	+		PGA1_c33740	0.72	-2.0
3,537,629	+		PGA1_c33740	0.73	+2.9
3,537,637	-		PGA1_c33740	0.74	-2.2
3,537,637	-		PGA1_c33740	0.74	-0.7
3,537,674	+		PGA1_c33740	0.78	+1.3
3,537,682	+		PGA1_c33740	0.79	+0.6
3,537,682	+		PGA1_c33740	0.79	+1.6