Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1793 and Psest_1794 are separated by 14 nucleotides Psest_1794 and Psest_1795 are separated by 2 nucleotides Psest_1795 and Psest_1796 are separated by 112 nucleotides
Psest_1793: Psest_1793 - Predicted divalent heavy-metal cations transporter, at 1,888,575 to 1,889,507
_1793
Psest_1794: Psest_1794 - Flagellar motor protein, at 1,889,522 to 1,890,262
_1794
Psest_1795: Psest_1795 - Flagellar motor component, at 1,890,265 to 1,891,074
_1795
Psest_1796: Psest_1796 - Predicted NAD/FAD-dependent oxidoreductase, at 1,891,187 to 1,892,173
_1796
Position (kb)
1890
1891
1892 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1889.566 kb on + strand at 1889.566 kb on + strand at 1889.670 kb on + strand, within Psest_1794 at 1889.876 kb on - strand, within Psest_1794 at 1889.887 kb on + strand, within Psest_1794 at 1889.887 kb on + strand, within Psest_1794 at 1890.029 kb on - strand, within Psest_1794 at 1890.171 kb on + strand, within Psest_1794 at 1890.171 kb on + strand, within Psest_1794 at 1890.172 kb on - strand, within Psest_1794 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.363 kb on - strand, within Psest_1795 at 1890.363 kb on - strand, within Psest_1795 at 1890.363 kb on - strand, within Psest_1795 at 1890.406 kb on + strand, within Psest_1795 at 1890.620 kb on + strand, within Psest_1795 at 1890.621 kb on - strand, within Psest_1795 at 1890.621 kb on - strand, within Psest_1795 at 1890.621 kb on - strand, within Psest_1795 at 1890.825 kb on + strand, within Psest_1795 at 1890.825 kb on + strand, within Psest_1795 at 1890.825 kb on + strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.857 kb on + strand, within Psest_1795 at 1890.857 kb on + strand, within Psest_1795 at 1890.857 kb on + strand, within Psest_1795 at 1890.858 kb on - strand, within Psest_1795 at 1890.858 kb on - strand, within Psest_1795 at 1891.278 kb on + strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.279 kb on - strand at 1891.338 kb on + strand, within Psest_1796 at 1891.338 kb on + strand, within Psest_1796 at 1891.520 kb on - strand, within Psest_1796 at 1891.914 kb on + strand, within Psest_1796 at 1891.914 kb on + strand, within Psest_1796 at 1891.915 kb on - strand, within Psest_1796 at 1892.001 kb on + strand, within Psest_1796 at 1892.002 kb on - strand, within Psest_1796
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,889,566 + +0.4 1,889,566 + +1.0 1,889,670 + Psest_1794 0.20 -0.3 1,889,876 - Psest_1794 0.48 +1.0 1,889,887 + Psest_1794 0.49 +0.3 1,889,887 + Psest_1794 0.49 -0.6 1,890,029 - Psest_1794 0.68 +0.5 1,890,171 + Psest_1794 0.88 +0.7 1,890,171 + Psest_1794 0.88 +0.7 1,890,172 - Psest_1794 0.88 +0.1 1,890,362 + Psest_1795 0.12 -0.0 1,890,362 + Psest_1795 0.12 +0.4 1,890,362 + Psest_1795 0.12 +0.5 1,890,362 + Psest_1795 0.12 -0.6 1,890,362 + Psest_1795 0.12 +0.7 1,890,363 - Psest_1795 0.12 -0.0 1,890,363 - Psest_1795 0.12 -0.8 1,890,363 - Psest_1795 0.12 +0.2 1,890,406 + Psest_1795 0.17 +1.0 1,890,620 + Psest_1795 0.44 +0.4 1,890,621 - Psest_1795 0.44 +0.5 1,890,621 - Psest_1795 0.44 -0.5 1,890,621 - Psest_1795 0.44 +0.1 1,890,825 + Psest_1795 0.69 -0.3 1,890,825 + Psest_1795 0.69 +0.1 1,890,825 + Psest_1795 0.69 +0.5 1,890,826 - Psest_1795 0.69 -0.8 1,890,826 - Psest_1795 0.69 +0.1 1,890,826 - Psest_1795 0.69 +0.1 1,890,826 - Psest_1795 0.69 +0.7 1,890,826 - Psest_1795 0.69 +0.6 1,890,826 - Psest_1795 0.69 +0.5 1,890,826 - Psest_1795 0.69 +0.4 1,890,826 - Psest_1795 0.69 +0.3 1,890,857 + Psest_1795 0.73 +0.4 1,890,857 + Psest_1795 0.73 -0.3 1,890,857 + Psest_1795 0.73 +0.9 1,890,858 - Psest_1795 0.73 +1.0 1,890,858 - Psest_1795 0.73 +3.0 1,891,278 + +0.5 1,891,279 - +1.0 1,891,279 - +0.9 1,891,279 - +0.1 1,891,279 - +2.3 1,891,279 - -0.4 1,891,279 - -0.3 1,891,279 - +0.2 1,891,279 - +0.1 1,891,338 + Psest_1796 0.15 -1.5 1,891,338 + Psest_1796 0.15 +0.2 1,891,520 - Psest_1796 0.34 -0.3 1,891,914 + Psest_1796 0.74 +0.4 1,891,914 + Psest_1796 0.74 +1.7 1,891,915 - Psest_1796 0.74 +0.3 1,892,001 + Psest_1796 0.82 +0.8 1,892,002 - Psest_1796 0.83 -0.9
Or see this region's nucleotide sequence