Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27620

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,876,747	+		PGA1_c27610	0.41	-0.4
2,876,747	+		PGA1_c27610	0.41	+0.4
2,876,777	-		PGA1_c27610	0.43	+1.8
2,876,798	-		PGA1_c27610	0.45	-0.5
2,876,849	+		PGA1_c27610	0.48	-1.1
2,876,849	+		PGA1_c27610	0.48	-0.5
2,876,849	+		PGA1_c27610	0.48	-0.3
2,876,867	-		PGA1_c27610	0.50	-0.5
2,876,874	+		PGA1_c27610	0.50	+0.0
2,876,878	-		PGA1_c27610	0.50	-1.4
2,876,919	-		PGA1_c27610	0.53	-1.8
2,876,989	-		PGA1_c27610	0.59	+0.8
2,876,991	+		PGA1_c27610	0.59	+1.2
2,876,991	-		PGA1_c27610	0.59	-1.2
2,876,999	-		PGA1_c27610	0.59	-0.1
2,876,999	-		PGA1_c27610	0.59	-0.7
2,876,999	-		PGA1_c27610	0.59	-0.0
2,876,999	-		PGA1_c27610	0.59	-1.2
2,877,001	+		PGA1_c27610	0.59	+0.3
2,877,004	-		PGA1_c27610	0.60	-0.6
2,877,020	-		PGA1_c27610	0.61	-0.2
2,877,059	+		PGA1_c27610	0.64	-0.1
2,877,075	+		PGA1_c27610	0.65	-0.6
2,877,106	+		PGA1_c27610	0.67	-1.5
2,877,145	+		PGA1_c27610	0.70	-2.5
2,877,216	+		PGA1_c27610	0.75	+0.1
2,877,217	-		PGA1_c27610	0.75	-1.1
2,877,224	-		PGA1_c27610	0.76	+0.7
2,877,238	+		PGA1_c27610	0.77	-0.6
2,877,253	+		PGA1_c27610	0.78	-0.7
2,877,262	-		PGA1_c27610	0.79	+0.1
2,877,262	-		PGA1_c27610	0.79	+0.4
2,877,267	-		PGA1_c27610	0.79	+0.1
2,877,267	-		PGA1_c27610	0.79	+0.4
2,877,267	-		PGA1_c27610	0.79	+0.9
2,877,287	+		PGA1_c27610	0.80	-1.4
2,877,287	+		PGA1_c27610	0.80	-0.0
2,877,287	+		PGA1_c27610	0.80	-1.8
2,877,287	+		PGA1_c27610	0.80	-0.1
2,877,287	+		PGA1_c27610	0.80	-1.3
2,877,287	+		PGA1_c27610	0.80	-0.3
2,877,295	-		PGA1_c27610	0.81	-0.2
2,877,295	-		PGA1_c27610	0.81	+1.6
2,877,295	-		PGA1_c27610	0.81	+0.4
2,877,295	-		PGA1_c27610	0.81	-1.2
2,877,295	-		PGA1_c27610	0.81	+1.6
2,877,295	-		PGA1_c27610	0.81	-1.7
2,877,307	-		PGA1_c27610	0.82	-0.7
2,877,387	-		PGA1_c27610	0.88	+0.0
2,877,459	+				-0.1
2,877,475	+				+0.6
2,877,536	+				-4.1
2,877,547	+				-1.2
2,877,590	+				+0.9
2,877,609	-				-0.6
2,877,682	+				-0.1
2,877,682	+				-0.8
2,877,682	+				+0.7
2,877,690	-				-0.9
2,877,690	-				-0.5
2,877,690	-				-0.1
2,877,690	-				-1.4
2,877,690	-				-1.2
2,877,782	-				+0.4
2,877,782	-				-1.4
2,877,837	-		PGA1_c27620	0.12	-0.2
2,877,837	-		PGA1_c27620	0.12	-0.5
2,877,837	-		PGA1_c27620	0.12	+1.1
2,877,852	+		PGA1_c27620	0.13	-0.2
2,877,852	+		PGA1_c27620	0.13	+0.3
2,877,852	+		PGA1_c27620	0.13	-0.6
2,877,852	+		PGA1_c27620	0.13	-1.7
2,877,860	-		PGA1_c27620	0.14	-0.1
2,877,860	-		PGA1_c27620	0.14	-1.7
2,877,860	-		PGA1_c27620	0.14	-0.3
2,877,860	-		PGA1_c27620	0.14	-1.2
2,877,860	-		PGA1_c27620	0.14	+0.4
2,877,860	-		PGA1_c27620	0.14	+1.2
2,877,860	-		PGA1_c27620	0.14	-0.5
2,877,860	-		PGA1_c27620	0.14	-0.9
2,877,860	-		PGA1_c27620	0.14	-2.9
2,877,860	-		PGA1_c27620	0.14	+1.1
2,877,870	-		PGA1_c27620	0.14	-0.8
2,877,870	-		PGA1_c27620	0.14	-0.2
2,877,870	-		PGA1_c27620	0.14	+1.1
2,877,986	+		PGA1_c27620	0.23	-0.1
2,877,986	+		PGA1_c27620	0.23	+0.0
2,877,986	+		PGA1_c27620	0.23	-1.5
2,877,986	+		PGA1_c27620	0.23	-1.1
2,877,986	+		PGA1_c27620	0.23	-0.4
2,877,994	-		PGA1_c27620	0.24	-0.3
2,877,994	-		PGA1_c27620	0.24	-1.7
2,877,994	-		PGA1_c27620	0.24	-0.6
2,877,994	-		PGA1_c27620	0.24	+0.2
2,877,994	-		PGA1_c27620	0.24	+0.2
2,878,008	+		PGA1_c27620	0.25	+0.1
2,878,129	+		PGA1_c27620	0.34	-1.2
2,878,150	+		PGA1_c27620	0.36	-0.7
2,878,195	+		PGA1_c27620	0.39	+0.4
2,878,221	-		PGA1_c27620	0.41	-0.3
2,878,405	+		PGA1_c27620	0.55	+0.4
2,878,456	+		PGA1_c27620	0.59	-2.6
2,878,485	-		PGA1_c27620	0.61	+0.7
2,878,529	+		PGA1_c27620	0.64	+0.0
2,878,537	-		PGA1_c27620	0.65	-0.8
2,878,542	+		PGA1_c27620	0.65	-1.2
2,878,550	-		PGA1_c27620	0.66	+0.1
2,878,550	-		PGA1_c27620	0.66	-0.9
2,878,591	+		PGA1_c27620	0.69	-0.8
2,878,602	+		PGA1_c27620	0.70	+0.0
2,878,604	-		PGA1_c27620	0.70	+1.0
2,878,604	-		PGA1_c27620	0.70	-0.7
2,878,678	+		PGA1_c27620	0.76	+0.1
2,878,685	+		PGA1_c27620	0.76	+0.2
2,878,686	-		PGA1_c27620	0.76	-0.5
2,878,698	-		PGA1_c27620	0.77	+1.3
2,878,723	-		PGA1_c27620	0.79	+0.1
2,878,726	-		PGA1_c27620	0.79	+0.7
2,878,773	+		PGA1_c27620	0.83	-0.4
2,878,995	-				-0.1
2,879,007	-				-0.7
2,879,013	+				+0.3
2,879,023	+				+2.0
2,879,031	-				+0.1
2,879,100	-				-1.9
2,879,116	+				-0.6
2,879,124	-				-0.4
2,879,124	-				-1.1
2,879,124	-				-1.1
2,879,124	-				-1.6
2,879,126	+				-1.1
2,879,160	-		PGA1_c27630	0.11	+0.0
2,879,173	+		PGA1_c27630	0.12	-0.7
2,879,173	+		PGA1_c27630	0.12	+0.6
2,879,173	+		PGA1_c27630	0.12	-0.0
2,879,173	+		PGA1_c27630	0.12	+1.6
2,879,181	-		PGA1_c27630	0.13	-0.6
2,879,243	+		PGA1_c27630	0.18	+0.7
2,879,322	+		PGA1_c27630	0.24	+0.5
2,879,322	+		PGA1_c27630	0.24	-3.9
2,879,322	+		PGA1_c27630	0.24	+0.4
2,879,330	-		PGA1_c27630	0.25	+0.1
2,879,419	+		PGA1_c27630	0.32	+0.4
2,879,483	-		PGA1_c27630	0.37	-0.6
2,879,523	-		PGA1_c27630	0.40	-1.9
2,879,564	+		PGA1_c27630	0.44	-0.3
2,879,569	+		PGA1_c27630	0.44	-1.1
2,879,618	+		PGA1_c27630	0.48	-2.1
2,879,626	-		PGA1_c27630	0.49	-1.5
2,879,631	+		PGA1_c27630	0.49	-2.0
2,879,644	-		PGA1_c27630	0.50	-0.7
2,879,644	-		PGA1_c27630	0.50	-0.1
2,879,644	-		PGA1_c27630	0.50	+1.2
2,879,689	+		PGA1_c27630	0.54	-0.4
2,879,689	+		PGA1_c27630	0.54	-2.0
2,879,689	+		PGA1_c27630	0.54	+0.3
2,879,689	+		PGA1_c27630	0.54	-1.2
2,879,689	+		PGA1_c27630	0.54	-1.0
2,879,697	-		PGA1_c27630	0.54	+0.5
2,879,697	-		PGA1_c27630	0.54	+0.3
2,879,697	-		PGA1_c27630	0.54	-0.7
2,879,746	+		PGA1_c27630	0.58	-0.6
2,879,766	+		PGA1_c27630	0.60	-1.5
2,879,774	-		PGA1_c27630	0.61	-0.9
2,879,776	+		PGA1_c27630	0.61	+2.1
2,879,791	-		PGA1_c27630	0.62	+0.0
2,879,865	+		PGA1_c27630	0.68	-0.1
2,879,871	-		PGA1_c27630	0.68	-0.5
2,879,912	+		PGA1_c27630	0.72	+0.6
2,879,913	-		PGA1_c27630	0.72	-1.7
2,879,920	-		PGA1_c27630	0.72	+0.2
2,879,965	-		PGA1_c27630	0.76	-1.4
2,879,972	+		PGA1_c27630	0.76	-0.5