Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14180

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,470,891	+		PGA1_c14170	0.23	-0.0
1,470,936	+		PGA1_c14170	0.27	+0.9
1,470,936	+		PGA1_c14170	0.27	+0.3
1,470,936	+		PGA1_c14170	0.27	+0.1
1,470,936	+		PGA1_c14170	0.27	+0.2
1,470,936	+		PGA1_c14170	0.27	+0.3
1,470,936	+		PGA1_c14170	0.27	-0.0
1,470,936	+		PGA1_c14170	0.27	+1.0
1,470,936	+		PGA1_c14170	0.27	+0.9
1,470,937	-		PGA1_c14170	0.27	+1.3
1,470,941	+		PGA1_c14170	0.28	+0.2
1,470,944	-		PGA1_c14170	0.28	+0.3
1,470,944	-		PGA1_c14170	0.28	+0.3
1,470,944	-		PGA1_c14170	0.28	+0.8
1,470,944	-		PGA1_c14170	0.28	-1.0
1,470,944	-		PGA1_c14170	0.28	-0.0
1,470,944	-		PGA1_c14170	0.28	+0.4
1,470,944	-		PGA1_c14170	0.28	+0.4
1,470,977	-		PGA1_c14170	0.31	+1.0
1,470,977	-		PGA1_c14170	0.31	+0.2
1,471,027	+		PGA1_c14170	0.36	-1.0
1,471,087	+		PGA1_c14170	0.42	+2.0
1,471,117	+		PGA1_c14170	0.44	+0.7
1,471,125	-		PGA1_c14170	0.45	-1.3
1,471,127	+		PGA1_c14170	0.45	-0.2
1,471,127	+		PGA1_c14170	0.45	+0.1
1,471,135	-		PGA1_c14170	0.46	+2.1
1,471,170	-		PGA1_c14170	0.49	+0.5
1,471,235	+		PGA1_c14170	0.56	+2.6
1,471,235	+				-0.6
1,471,329	+		PGA1_c14170	0.64	-0.0
1,471,334	+		PGA1_c14170	0.65	+0.6
1,471,341	+		PGA1_c14170	0.66	+0.4
1,471,349	-		PGA1_c14170	0.66	+4.0
1,471,349	-		PGA1_c14170	0.66	+0.3
1,471,349	-		PGA1_c14170	0.66	+0.8
1,471,349	-		PGA1_c14170	0.66	+0.3
1,471,359	-		PGA1_c14170	0.67	+1.0
1,471,396	-		PGA1_c14170	0.71	+2.3
1,471,411	+		PGA1_c14170	0.72	+0.7
1,471,419	-		PGA1_c14170	0.73	+1.7
1,471,473	-		PGA1_c14170	0.78	+0.6
1,471,551	+		PGA1_c14170	0.86	+0.2
1,471,667	+				+1.0
1,471,730	+				+1.1
1,471,745	+				+1.6
1,471,753	-				-0.6
1,471,753	-				-0.3
1,471,756	+				-0.2
1,471,991	+				-0.0
1,472,027	+				-0.1
1,472,142	-		PGA1_c14180	0.16	-1.6
1,472,227	+		PGA1_c14180	0.21	+0.6
1,472,227	+		PGA1_c14180	0.21	+1.7
1,472,235	-		PGA1_c14180	0.22	+1.4
1,472,235	-		PGA1_c14180	0.22	-0.3
1,472,283	+		PGA1_c14180	0.25	+0.6
1,472,398	+		PGA1_c14180	0.32	+1.2
1,472,422	+		PGA1_c14180	0.33	+0.4
1,472,429	-		PGA1_c14180	0.33	+0.3
1,472,440	-		PGA1_c14180	0.34	-0.9
1,472,465	+		PGA1_c14180	0.36	+1.1
1,472,473	-		PGA1_c14180	0.36	-0.9
1,472,475	+		PGA1_c14180	0.36	-1.4
1,472,475	+		PGA1_c14180	0.36	+0.6
1,472,475	+		PGA1_c14180	0.36	+1.5
1,472,475	+		PGA1_c14180	0.36	+0.3
1,472,509	-		PGA1_c14180	0.38	+0.7
1,472,534	+		PGA1_c14180	0.40	-0.3
1,472,534	+		PGA1_c14180	0.40	-2.6
1,472,534	+		PGA1_c14180	0.40	+1.2
1,472,534	+		PGA1_c14180	0.40	-0.0
1,472,534	+		PGA1_c14180	0.40	+0.2
1,472,542	-		PGA1_c14180	0.40	-0.4
1,472,542	-		PGA1_c14180	0.40	-3.0
1,472,568	+		PGA1_c14180	0.42	+0.1
1,472,700	+		PGA1_c14180	0.50	+1.4
1,472,719	-		PGA1_c14180	0.51	+0.3
1,472,743	+		PGA1_c14180	0.52	+0.8
1,472,751	-		PGA1_c14180	0.53	+1.0
1,472,782	+		PGA1_c14180	0.55	-1.6
1,472,822	+		PGA1_c14180	0.57	+0.3
1,472,832	+		PGA1_c14180	0.58	+1.2
1,473,047	+		PGA1_c14180	0.71	+1.6
1,473,047	+		PGA1_c14180	0.71	-0.8
1,473,055	-		PGA1_c14180	0.71	+0.5
1,473,060	-		PGA1_c14180	0.71	+0.8
1,473,080	-		PGA1_c14180	0.72	+0.8
1,473,080	-		PGA1_c14180	0.72	-0.2
1,473,105	-		PGA1_c14180	0.74	+1.3
1,473,161	+		PGA1_c14180	0.77	+0.7
1,473,186	+		PGA1_c14180	0.79	+1.0
1,473,270	-		PGA1_c14180	0.84	+2.9
1,473,284	-		PGA1_c14180	0.85	-0.7
1,473,285	+		PGA1_c14180	0.85	-1.0
1,473,285	+		PGA1_c14180	0.85	-0.2
1,473,285	+		PGA1_c14180	0.85	+0.5
1,473,285	+		PGA1_c14180	0.85	+1.8
1,473,285	+		PGA1_c14180	0.85	+1.0
1,473,285	+		PGA1_c14180	0.85	+0.1
1,473,285	+		PGA1_c14180	0.85	-0.2
1,473,293	-		PGA1_c14180	0.85	+2.0
1,473,293	-		PGA1_c14180	0.85	+0.7
1,473,293	-		PGA1_c14180	0.85	+1.0
1,473,293	-		PGA1_c14180	0.85	+1.2
1,473,293	-		PGA1_c14180	0.85	-0.6
1,473,293	-		PGA1_c14180	0.85	+0.6
1,473,293	-		PGA1_c14180	0.85	-1.3
1,473,295	-		PGA1_c14180	0.85	+0.6
1,473,311	+		PGA1_c14180	0.86	+1.0
1,473,420	-				-2.3
1,473,426	-				+0.7
1,473,482	+				-0.7
1,473,515	-				+1.0
1,473,546	+				-0.6
1,473,588	+				+0.3
1,473,593	+				-1.7
1,473,593	+				+2.0
1,473,593	+				+0.5
1,473,593	+				+2.0
1,473,672	+				+0.3
1,473,781	-				-1.4
1,473,874	+				+2.6
1,473,882	-				-0.9
1,473,882	-				+0.2
1,473,882	-				+0.9
1,473,887	-				+1.0
1,474,018	+				+1.4
1,474,018	+				+1.1
1,474,018	+				+1.0
1,474,026	-				+1.4
1,474,026	-				+1.0
1,474,055	-		PGA1_c14190	0.13	+1.2
1,474,085	+		PGA1_c14190	0.17	+2.2
1,474,093	-		PGA1_c14190	0.18	+0.6
1,474,093	-		PGA1_c14190	0.18	+0.6
1,474,114	+		PGA1_c14190	0.20	-0.3
1,474,150	+		PGA1_c14190	0.24	+0.9
1,474,199	+		PGA1_c14190	0.30	+1.0
1,474,220	+		PGA1_c14190	0.33	+0.2
1,474,264	+		PGA1_c14190	0.38	+1.8
1,474,264	+		PGA1_c14190	0.38	+1.0
1,474,272	-		PGA1_c14190	0.39	+1.0
1,474,272	-				+2.6
1,474,309	+		PGA1_c14190	0.44	+2.7
1,474,317	-		PGA1_c14190	0.45	+2.0
1,474,360	+		PGA1_c14190	0.50	+2.0
1,474,401	-		PGA1_c14190	0.55	+0.6
1,474,420	+		PGA1_c14190	0.57	+0.8
1,474,452	-		PGA1_c14190	0.61	+1.0
1,474,502	+		PGA1_c14190	0.67	-0.3
1,474,510	-		PGA1_c14190	0.68	-0.8
1,474,519	+		PGA1_c14190	0.69	+1.0
1,474,519	+		PGA1_c14190	0.69	+0.5