Experiment: perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1266 and Psest_1267 are separated by 4 nucleotides Psest_1267 and Psest_1268 are separated by 158 nucleotides
Psest_1266: Psest_1266 - ribosome-associated GTPase EngA, at 1,371,182 to 1,372,675
_1266
Psest_1267: Psest_1267 - serine O-acetyltransferase, at 1,372,680 to 1,373,474
_1267
Psest_1268: Psest_1268 - Aspartate/tyrosine/aromatic aminotransferase, at 1,373,633 to 1,374,781
_1268
Position (kb)
1372
1373
1374 Strain fitness (log2 ratio)
-1
0
1 at 1372.965 kb on + strand, within Psest_1267 at 1372.965 kb on + strand, within Psest_1267 at 1372.965 kb on + strand, within Psest_1267 at 1372.965 kb on + strand, within Psest_1267 at 1372.965 kb on + strand, within Psest_1267 at 1372.965 kb on + strand, within Psest_1267 at 1372.966 kb on - strand, within Psest_1267 at 1372.966 kb on - strand, within Psest_1267 at 1373.166 kb on + strand, within Psest_1267 at 1373.166 kb on + strand, within Psest_1267 at 1373.166 kb on + strand, within Psest_1267 at 1373.167 kb on - strand, within Psest_1267 at 1373.265 kb on + strand, within Psest_1267 at 1373.265 kb on + strand, within Psest_1267 at 1373.265 kb on + strand, within Psest_1267 at 1373.265 kb on + strand, within Psest_1267 at 1373.265 kb on + strand, within Psest_1267 at 1373.266 kb on - strand, within Psest_1267 at 1373.266 kb on - strand, within Psest_1267 at 1373.266 kb on - strand, within Psest_1267 at 1373.486 kb on + strand at 1373.486 kb on + strand at 1373.487 kb on - strand at 1373.487 kb on - strand at 1373.487 kb on - strand at 1373.523 kb on + strand at 1373.524 kb on - strand at 1373.644 kb on + strand at 1373.645 kb on - strand at 1373.677 kb on + strand at 1373.758 kb on - strand, within Psest_1268 at 1373.973 kb on + strand, within Psest_1268 at 1373.996 kb on + strand, within Psest_1268 at 1374.015 kb on + strand, within Psest_1268 at 1374.206 kb on + strand, within Psest_1268 at 1374.206 kb on + strand, within Psest_1268 at 1374.206 kb on + strand, within Psest_1268 at 1374.206 kb on + strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.207 kb on - strand, within Psest_1268 at 1374.228 kb on - strand, within Psest_1268 at 1374.287 kb on + strand, within Psest_1268 at 1374.287 kb on + strand, within Psest_1268 at 1374.353 kb on + strand, within Psest_1268 at 1374.404 kb on + strand, within Psest_1268
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 25 mM remove 1,372,965 + Psest_1267 0.36 -0.7 1,372,965 + Psest_1267 0.36 -0.7 1,372,965 + Psest_1267 0.36 -0.0 1,372,965 + Psest_1267 0.36 -0.7 1,372,965 + Psest_1267 0.36 -0.8 1,372,965 + Psest_1267 0.36 -1.6 1,372,966 - Psest_1267 0.36 -1.1 1,372,966 - Psest_1267 0.36 -0.1 1,373,166 + Psest_1267 0.61 -0.2 1,373,166 + Psest_1267 0.61 -0.7 1,373,166 + Psest_1267 0.61 -0.8 1,373,167 - Psest_1267 0.61 -1.2 1,373,265 + Psest_1267 0.74 -0.8 1,373,265 + Psest_1267 0.74 -0.8 1,373,265 + Psest_1267 0.74 -0.7 1,373,265 + Psest_1267 0.74 -1.5 1,373,265 + Psest_1267 0.74 -0.2 1,373,266 - Psest_1267 0.74 -1.1 1,373,266 - Psest_1267 0.74 -0.4 1,373,266 - Psest_1267 0.74 -0.8 1,373,486 + -1.4 1,373,486 + +0.9 1,373,487 - +0.3 1,373,487 - +0.5 1,373,487 - +0.1 1,373,523 + -0.5 1,373,524 - +1.3 1,373,644 + -0.9 1,373,645 - +0.7 1,373,677 + -0.2 1,373,758 - Psest_1268 0.11 +0.4 1,373,973 + Psest_1268 0.30 +0.0 1,373,996 + Psest_1268 0.32 +0.2 1,374,015 + Psest_1268 0.33 -0.3 1,374,206 + Psest_1268 0.50 -0.0 1,374,206 + Psest_1268 0.50 -0.2 1,374,206 + Psest_1268 0.50 +0.7 1,374,206 + Psest_1268 0.50 -0.7 1,374,207 - Psest_1268 0.50 +0.7 1,374,207 - Psest_1268 0.50 +0.7 1,374,207 - Psest_1268 0.50 +0.4 1,374,207 - Psest_1268 0.50 +0.6 1,374,207 - Psest_1268 0.50 +0.2 1,374,207 - Psest_1268 0.50 +1.3 1,374,207 - Psest_1268 0.50 +0.5 1,374,228 - Psest_1268 0.52 +0.5 1,374,287 + Psest_1268 0.57 -0.7 1,374,287 + Psest_1268 0.57 -0.1 1,374,353 + Psest_1268 0.63 -0.1 1,374,404 + Psest_1268 0.67 +0.5
Or see this region's nucleotide sequence