Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0423 and Dshi_0424 are separated by 616 nucleotides Dshi_0424 and Dshi_0426 are separated by 921 nucleotides
Dshi_0423: Dshi_0423 - phosphoesterase PA-phosphatase related (RefSeq), at 415,763 to 416,488
_0423
Dshi_0424: Dshi_0424 - peptidase M41 (RefSeq), at 417,105 to 417,566
_0424
Dshi_0426: Dshi_0426 - hypothetical protein (RefSeq), at 418,488 to 418,850
_0426
Position (kb) 417
418 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 416.123 kb on - strand, within Dshi_0423 at 416.219 kb on + strand, within Dshi_0423 at 416.273 kb on - strand, within Dshi_0423 at 416.297 kb on - strand, within Dshi_0423 at 416.309 kb on + strand, within Dshi_0423 at 416.317 kb on - strand, within Dshi_0423 at 416.405 kb on - strand, within Dshi_0423 at 416.425 kb on + strand at 416.427 kb on + strand at 416.433 kb on + strand at 416.505 kb on - strand at 416.512 kb on - strand at 416.530 kb on - strand at 416.557 kb on + strand at 416.562 kb on + strand at 416.565 kb on - strand at 416.629 kb on + strand at 416.631 kb on + strand at 416.668 kb on + strand at 416.675 kb on + strand at 416.676 kb on - strand at 416.701 kb on + strand at 416.785 kb on + strand at 416.786 kb on - strand at 416.832 kb on + strand at 416.843 kb on + strand at 416.851 kb on - strand at 416.853 kb on + strand at 416.853 kb on + strand at 416.853 kb on + strand at 416.861 kb on - strand at 416.861 kb on - strand at 416.861 kb on - strand at 416.880 kb on - strand at 416.882 kb on + strand at 416.922 kb on - strand at 417.005 kb on - strand at 417.012 kb on - strand at 417.014 kb on + strand at 417.027 kb on + strand at 417.037 kb on + strand at 417.045 kb on - strand at 417.045 kb on - strand at 417.052 kb on - strand at 417.059 kb on + strand at 417.128 kb on + strand at 417.183 kb on + strand, within Dshi_0424 at 417.191 kb on - strand, within Dshi_0424 at 417.197 kb on + strand, within Dshi_0424 at 417.212 kb on + strand, within Dshi_0424 at 417.237 kb on + strand, within Dshi_0424 at 417.239 kb on + strand, within Dshi_0424 at 417.251 kb on - strand, within Dshi_0424 at 417.267 kb on + strand, within Dshi_0424 at 417.313 kb on + strand, within Dshi_0424 at 417.346 kb on - strand, within Dshi_0424 at 417.348 kb on - strand, within Dshi_0424 at 417.441 kb on + strand, within Dshi_0424 at 417.441 kb on - strand, within Dshi_0424 at 417.474 kb on + strand, within Dshi_0424 at 417.480 kb on + strand, within Dshi_0424 at 417.572 kb on + strand at 417.572 kb on + strand at 417.578 kb on - strand at 417.580 kb on - strand at 417.632 kb on - strand at 417.701 kb on - strand at 417.816 kb on + strand at 417.824 kb on - strand at 417.829 kb on + strand at 417.837 kb on - strand at 417.856 kb on - strand at 417.864 kb on - strand at 417.936 kb on + strand at 417.958 kb on + strand at 418.075 kb on + strand at 418.083 kb on - strand at 418.090 kb on - strand at 418.103 kb on - strand at 418.139 kb on + strand at 418.158 kb on - strand at 418.225 kb on - strand at 418.263 kb on + strand at 418.377 kb on + strand at 418.450 kb on - strand at 418.533 kb on - strand, within Dshi_0426 at 418.562 kb on + strand, within Dshi_0426 at 418.563 kb on + strand, within Dshi_0426
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 416,123 - Dshi_0423 0.50 -0.8 416,219 + Dshi_0423 0.63 +0.5 416,273 - Dshi_0423 0.70 -0.3 416,297 - Dshi_0423 0.74 -1.1 416,309 + Dshi_0423 0.75 -0.1 416,317 - Dshi_0423 0.76 -0.1 416,405 - Dshi_0423 0.88 -0.0 416,425 + -0.6 416,427 + -0.3 416,433 + +1.8 416,505 - +0.2 416,512 - -1.3 416,530 - -0.3 416,557 + -0.1 416,562 + +0.4 416,565 - -0.3 416,629 + +0.6 416,631 + +0.5 416,668 + +0.5 416,675 + -0.9 416,676 - +0.5 416,701 + -1.0 416,785 + -0.3 416,786 - -0.6 416,832 + +0.0 416,843 + +0.3 416,851 - +0.0 416,853 + -0.9 416,853 + +0.3 416,853 + -1.0 416,861 - -0.1 416,861 - +0.6 416,861 - -0.2 416,880 - +2.0 416,882 + +2.0 416,922 - +0.7 417,005 - -1.0 417,012 - -0.1 417,014 + +0.2 417,027 + +0.5 417,037 + +0.4 417,045 - +0.8 417,045 - +0.3 417,052 - -0.3 417,059 + -0.5 417,128 + -0.3 417,183 + Dshi_0424 0.17 +0.7 417,191 - Dshi_0424 0.19 -0.2 417,197 + Dshi_0424 0.20 +0.5 417,212 + Dshi_0424 0.23 -0.7 417,237 + Dshi_0424 0.29 -0.4 417,239 + Dshi_0424 0.29 +1.6 417,251 - Dshi_0424 0.32 -1.2 417,267 + Dshi_0424 0.35 -0.0 417,313 + Dshi_0424 0.45 +0.2 417,346 - Dshi_0424 0.52 -0.8 417,348 - Dshi_0424 0.53 +1.6 417,441 + Dshi_0424 0.73 -0.6 417,441 - Dshi_0424 0.73 -1.3 417,474 + Dshi_0424 0.80 -0.2 417,480 + Dshi_0424 0.81 -0.1 417,572 + +3.0 417,572 + -1.1 417,578 - +0.5 417,580 - -1.2 417,632 - -0.5 417,701 - -0.4 417,816 + -0.7 417,824 - +0.2 417,829 + -0.2 417,837 - +0.2 417,856 - -2.2 417,864 - -0.3 417,936 + +0.4 417,958 + -0.3 418,075 + +0.4 418,083 - -1.0 418,090 - -2.5 418,103 - -0.2 418,139 + -0.1 418,158 - -0.4 418,225 - +0.7 418,263 + +0.5 418,377 + +0.6 418,450 - -0.5 418,533 - Dshi_0426 0.12 -0.2 418,562 + Dshi_0426 0.20 +0.4 418,563 + Dshi_0426 0.21 -1.8
Or see this region's nucleotide sequence