Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28730

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
3,010,475	+				-1.7
3,010,482	+				+3.6
3,010,482	+				+1.0
3,010,490	-				-1.0
3,010,490	-				-1.5
3,010,490	-				+0.7
3,010,492	+				-1.0
3,010,518	+				+1.3
3,010,528	+				+0.0
3,010,564	+				+1.6
3,010,567	-				+0.6
3,010,572	-				+1.3
3,010,650	-		PGA1_c28720	0.16	+0.5
3,010,664	-		PGA1_c28720	0.18	+0.3
3,010,676	+		PGA1_c28720	0.20	+2.1
3,010,757	-		PGA1_c28720	0.30	+2.1
3,010,795	+				+2.3
3,010,867	-		PGA1_c28720	0.45	+1.2
3,010,881	+		PGA1_c28720	0.47	-0.3
3,010,889	-		PGA1_c28720	0.48	+1.3
3,010,910	+		PGA1_c28720	0.51	+1.0
3,010,918	-		PGA1_c28720	0.52	+0.9
3,010,919	+		PGA1_c28720	0.52	-0.4
3,010,954	+		PGA1_c28720	0.56	+1.3
3,010,954	+		PGA1_c28720	0.56	+0.6
3,010,955	-		PGA1_c28720	0.57	-1.0
3,010,961	+		PGA1_c28720	0.57	-0.7
3,010,969	-		PGA1_c28720	0.58	-0.3
3,011,024	-		PGA1_c28720	0.66	+0.8
3,011,036	-		PGA1_c28720	0.67	+3.3
3,011,090	-		PGA1_c28720	0.75	-1.7
3,011,214	-				-1.3
3,011,219	-				+1.9
3,011,319	+				+0.0
3,011,319	+				+2.9
3,011,327	-				+1.3
3,011,359	+				+2.5
3,011,367	-				+2.5
3,011,388	-				+0.5
3,011,483	+				-0.2
3,011,519	+				-0.2
3,011,555	+		PGA1_c28730	0.13	+1.3
3,011,563	+		PGA1_c28730	0.14	+1.3
3,011,563	+		PGA1_c28730	0.14	+0.1
3,011,563	+		PGA1_c28730	0.14	+0.6
3,011,563	+		PGA1_c28730	0.14	+1.5
3,011,563	+		PGA1_c28730	0.14	+0.1
3,011,563	+		PGA1_c28730	0.14	+2.1
3,011,571	-		PGA1_c28730	0.15	+0.8
3,011,571	-		PGA1_c28730	0.15	+2.1
3,011,575	+		PGA1_c28730	0.16	+2.5
3,011,583	-		PGA1_c28730	0.17	+1.6
3,011,596	-		PGA1_c28730	0.18	+1.3
3,011,604	-		PGA1_c28730	0.19	+1.3
3,011,606	-		PGA1_c28730	0.20	+3.1
3,011,631	-		PGA1_c28730	0.23	+1.9
3,011,643	+		PGA1_c28730	0.24	-1.0
3,011,643	+		PGA1_c28730	0.24	-0.3
3,011,650	+		PGA1_c28730	0.25	+0.3
3,011,651	-		PGA1_c28730	0.25	-1.3
3,011,726	-		PGA1_c28730	0.35	-0.2
3,011,734	-		PGA1_c28730	0.36	+0.6
3,011,736	-		PGA1_c28730	0.36	+1.3
3,011,821	+		PGA1_c28730	0.47	+3.3
3,011,858	-		PGA1_c28730	0.52	+2.7
3,011,858	-		PGA1_c28730	0.52	+3.0
3,011,875	+		PGA1_c28730	0.54	-0.3
3,011,883	-		PGA1_c28730	0.55	+0.3
3,011,883	-		PGA1_c28730	0.55	-2.4
3,011,888	+		PGA1_c28730	0.56	+2.0
3,011,888	+		PGA1_c28730	0.56	+1.5
3,011,907	+		PGA1_c28730	0.58	+0.5
3,011,932	-		PGA1_c28730	0.61	+0.1
3,011,975	+		PGA1_c28730	0.67	-0.3
3,012,031	+		PGA1_c28730	0.74	+0.3
3,012,036	+		PGA1_c28730	0.75	+1.6
3,012,041	+		PGA1_c28730	0.75	-1.5
3,012,062	-		PGA1_c28730	0.78	-1.3
3,012,068	+		PGA1_c28730	0.79	+2.0
3,012,069	+		PGA1_c28730	0.79	+0.9
3,012,069	+		PGA1_c28730	0.79	-0.3
3,012,187	+				-0.1
3,012,195	-				+2.1
3,012,230	+				+2.5
3,012,272	+				-0.6
3,012,313	+				+0.2
3,012,321	-				-0.0
3,012,331	-				-2.7
3,012,378	+				+1.6
3,012,431	+		PGA1_c28740	0.14	-1.0
3,012,431	+		PGA1_c28740	0.14	+0.6
3,012,431	+		PGA1_c28740	0.14	+0.2
3,012,431	+		PGA1_c28740	0.14	+1.5
3,012,431	+		PGA1_c28740	0.14	+0.7
3,012,431	+		PGA1_c28740	0.14	-1.3
3,012,431	+		PGA1_c28740	0.14	+0.3
3,012,431	+		PGA1_c28740	0.14	+1.9
3,012,431	+		PGA1_c28740	0.14	+0.7
3,012,431	+		PGA1_c28740	0.14	+1.4
3,012,439	-		PGA1_c28740	0.14	-0.7
3,012,439	-		PGA1_c28740	0.14	+1.5
3,012,439	-		PGA1_c28740	0.14	-1.2
3,012,439	-		PGA1_c28740	0.14	-0.3
3,012,439	-		PGA1_c28740	0.14	+1.5
3,012,439	-		PGA1_c28740	0.14	+1.9
3,012,439	-		PGA1_c28740	0.14	+3.6
3,012,439	-		PGA1_c28740	0.14	-2.5
3,012,439	-		PGA1_c28740	0.14	+0.3
3,012,439	-		PGA1_c28740	0.14	-1.3
3,012,439	-		PGA1_c28740	0.14	+1.7
3,012,439	-		PGA1_c28740	0.14	+0.2
3,012,439	-		PGA1_c28740	0.14	-0.7
3,012,477	+		PGA1_c28740	0.17	+3.9
3,012,478	-		PGA1_c28740	0.17	+0.3
3,012,502	+		PGA1_c28740	0.18	+1.9
3,012,502	+		PGA1_c28740	0.18	+2.3
3,012,502	+		PGA1_c28740	0.18	-0.3
3,012,502	+		PGA1_c28740	0.18	-0.7
3,012,502	+		PGA1_c28740	0.18	+2.1
3,012,505	-		PGA1_c28740	0.19	-1.0
3,012,509	+		PGA1_c28740	0.19	+3.9
3,012,510	-		PGA1_c28740	0.19	+0.6
3,012,518	-		PGA1_c28740	0.19	+2.6
3,012,543	+		PGA1_c28740	0.21	+1.9
3,012,568	+		PGA1_c28740	0.23	+1.3
3,012,612	-		PGA1_c28740	0.26	+3.1
3,012,633	-		PGA1_c28740	0.27	-0.3
3,012,656	-		PGA1_c28740	0.29	-0.7
3,012,848	+		PGA1_c28740	0.42	+1.3
3,012,856	-		PGA1_c28740	0.42	+1.2
3,012,856	-		PGA1_c28740	0.42	-2.0
3,012,856	-		PGA1_c28740	0.42	+0.7
3,012,856	-		PGA1_c28740	0.42	-0.4
3,012,856	-		PGA1_c28740	0.42	+1.1
3,012,856	-		PGA1_c28740	0.42	+0.9
3,012,856	-		PGA1_c28740	0.42	+0.5
3,012,856	-		PGA1_c28740	0.42	+1.6
3,012,856	-		PGA1_c28740	0.42	+0.8
3,012,856	-		PGA1_c28740	0.42	+0.6
3,012,864	+		PGA1_c28740	0.43	-0.7
3,012,864	+		PGA1_c28740	0.43	+0.3
3,012,887	-		PGA1_c28740	0.45	+1.3
3,012,911	-		PGA1_c28740	0.46	+0.3
3,012,912	+		PGA1_c28740	0.46	-0.3
3,012,912	+		PGA1_c28740	0.46	+0.9
3,012,912	+		PGA1_c28740	0.46	+3.0
3,012,912	+		PGA1_c28740	0.46	+1.9
3,012,920	-		PGA1_c28740	0.47	-1.5
3,012,988	-		PGA1_c28740	0.51	+0.4
3,013,026	-		PGA1_c28740	0.54	+1.3
3,013,026	-		PGA1_c28740	0.54	+0.9
3,013,037	+		PGA1_c28740	0.55	+0.1
3,013,058	-		PGA1_c28740	0.56	-0.9
3,013,058	-		PGA1_c28740	0.56	-1.9
3,013,058	-		PGA1_c28740	0.56	-0.7
3,013,147	+		PGA1_c28740	0.62	+1.6