Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26140

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
2,718,005	-		PGA1_c26120	0.81	-1.6
2,718,175	+				+0.3
2,718,175	+				-0.4
2,718,215	+				-1.9
2,718,251	+				-0.1
2,718,264	-				+0.6
2,718,309	+				-2.2
2,718,380	+				+1.1
2,718,388	-				+0.6
2,718,412	+				+0.6
2,718,420	-				+1.0
2,718,540	-				-1.7
2,718,540	-				-2.4
2,718,627	+		PGA1_c26130	0.26	-0.6
2,718,637	+		PGA1_c26130	0.29	-0.6
2,718,637	+		PGA1_c26130	0.29	+0.2
2,718,645	-		PGA1_c26130	0.31	+1.1
2,718,645	-		PGA1_c26130	0.31	+0.3
2,718,672	+		PGA1_c26130	0.38	-0.4
2,718,695	+		PGA1_c26130	0.43	-1.6
2,718,695	+		PGA1_c26130	0.43	+0.4
2,718,700	+		PGA1_c26130	0.45	-2.7
2,718,708	-		PGA1_c26130	0.47	+0.5
2,718,708	-		PGA1_c26130	0.47	+0.3
2,718,728	+		PGA1_c26130	0.52	+1.2
2,718,736	-		PGA1_c26130	0.54	+0.6
2,718,762	+		PGA1_c26130	0.60	-1.6
2,718,781	+		PGA1_c26130	0.65	+1.1
2,718,811	+		PGA1_c26130	0.72	-0.2
2,718,814	-		PGA1_c26130	0.73	-1.0
2,718,819	-		PGA1_c26130	0.74	+0.2
2,718,860	-		PGA1_c26130	0.85	-1.0
2,718,921	+				-0.1
2,718,924	-				+0.8
2,718,947	+				+1.9
2,718,951	-				-0.7
2,719,010	-				-1.7
2,719,033	+				-0.7
2,719,041	-				-2.3
2,719,043	+				-2.7
2,719,044	+				-0.2
2,719,044	+				+1.9
2,719,052	-				-0.1
2,719,052	-				+1.0
2,719,052	-				+1.1
2,719,052	-				+0.0
2,719,052	-				-0.3
2,719,052	-				+1.1
2,719,052	-				+3.1
2,719,052	-				+0.6
2,719,052	-				-1.7
2,719,077	+				+0.8
2,719,085	-				-0.8
2,719,129	-				+1.0
2,719,153	-				-1.9
2,719,153	-				+0.1
2,719,187	+				-1.2
2,719,237	-				+0.0
2,719,302	-				+2.4
2,719,364	-		PGA1_c26140	0.11	+0.5
2,719,367	-		PGA1_c26140	0.11	-1.0
2,719,377	-		PGA1_c26140	0.11	+2.1
2,719,377	-		PGA1_c26140	0.11	+0.8
2,719,399	-		PGA1_c26140	0.12	+1.5
2,719,399	-		PGA1_c26140	0.12	+0.3
2,719,406	+		PGA1_c26140	0.12	+0.9
2,719,423	-		PGA1_c26140	0.13	+0.3
2,719,456	+		PGA1_c26140	0.14	-0.2
2,719,464	-		PGA1_c26140	0.14	+1.5
2,719,501	-		PGA1_c26140	0.15	+1.1
2,719,501	-		PGA1_c26140	0.15	-0.9
2,719,659	-		PGA1_c26140	0.20	+0.0
2,719,672	-		PGA1_c26140	0.20	+2.4
2,719,672	-		PGA1_c26140	0.20	+2.3
2,719,796	+		PGA1_c26140	0.24	+0.9
2,719,969	-		PGA1_c26140	0.29	+1.3
2,719,994	+		PGA1_c26140	0.30	+1.3
2,720,028	+		PGA1_c26140	0.31	-0.0
2,720,042	+		PGA1_c26140	0.31	+0.7
2,720,075	+		PGA1_c26140	0.32	+1.0
2,720,075	+		PGA1_c26140	0.32	-1.1
2,720,082	-		PGA1_c26140	0.32	+0.0
2,720,082	-		PGA1_c26140	0.32	+0.3
2,720,082	-		PGA1_c26140	0.32	+1.5
2,720,082	-		PGA1_c26140	0.32	-1.1
2,720,082	-		PGA1_c26140	0.32	+0.9
2,720,124	-		PGA1_c26140	0.34	-1.1
2,720,211	-		PGA1_c26140	0.36	+0.5
2,720,265	+		PGA1_c26140	0.38	+1.8
2,720,415	-		PGA1_c26140	0.42	+0.4
2,720,423	-		PGA1_c26140	0.42	+1.8
2,720,442	-		PGA1_c26140	0.43	-0.4
2,720,459	-		PGA1_c26140	0.44	+0.7
2,720,464	-		PGA1_c26140	0.44	+0.4
2,720,499	+		PGA1_c26140	0.45	-1.3
2,720,507	-		PGA1_c26140	0.45	+0.1
2,720,507	-		PGA1_c26140	0.45	-0.9
2,720,581	-		PGA1_c26140	0.47	+0.1
2,720,665	-		PGA1_c26140	0.50	-0.6
2,720,780	+		PGA1_c26140	0.53	+1.3
2,720,814	-		PGA1_c26140	0.54	-0.2
2,720,815	+		PGA1_c26140	0.54	+0.8
2,720,917	+		PGA1_c26140	0.57	-1.3
2,720,932	+		PGA1_c26140	0.58	-0.5
2,720,940	-		PGA1_c26140	0.58	+0.4
2,720,958	-		PGA1_c26140	0.59	+1.9
2,721,038	-		PGA1_c26140	0.61	-0.7
2,721,068	-		PGA1_c26140	0.62	-1.4
2,721,082	-		PGA1_c26140	0.62	+0.5
2,721,147	+		PGA1_c26140	0.64	-0.6
2,721,158	+		PGA1_c26140	0.65	+0.3
2,721,192	-		PGA1_c26140	0.66	-1.3
2,721,192	-		PGA1_c26140	0.66	-0.6
2,721,192	-		PGA1_c26140	0.66	+0.4
2,721,192	-		PGA1_c26140	0.66	-0.7
2,721,294	+		PGA1_c26140	0.69	+1.0
2,721,310	-		PGA1_c26140	0.69	-0.1
2,721,328	-		PGA1_c26140	0.70	-0.8
2,721,365	+		PGA1_c26140	0.71	+0.3
2,721,403	+		PGA1_c26140	0.72	+0.6
2,721,579	+		PGA1_c26140	0.77	+1.0
2,721,605	+		PGA1_c26140	0.78	+1.2
2,721,605	+		PGA1_c26140	0.78	+0.3
2,721,613	-		PGA1_c26140	0.78	-1.6
2,721,630	+		PGA1_c26140	0.79	+1.1
2,721,630	+		PGA1_c26140	0.79	-0.0
2,721,630	+		PGA1_c26140	0.79	+1.1
2,721,638	-		PGA1_c26140	0.79	+2.7
2,721,740	+		PGA1_c26140	0.82	+0.0
2,721,740	+		PGA1_c26140	0.82	+1.0
2,721,740	+		PGA1_c26140	0.82	+0.4
2,721,765	-		PGA1_c26140	0.83	+0.1
2,721,814	-		PGA1_c26140	0.84	+0.7
2,721,814	-		PGA1_c26140	0.84	+1.6
2,721,828	+		PGA1_c26140	0.85	-1.0
2,721,851	-		PGA1_c26140	0.85	-1.1
2,721,873	+		PGA1_c26140	0.86	-0.3
2,721,981	-		PGA1_c26140	0.89	+1.9
2,722,045	+				+0.5
2,722,045	+				-0.3
2,722,045	+				+1.2
2,722,045	+				+1.6
2,722,053	-				+0.8
2,722,055	+				+0.7
2,722,063	-				+1.2
2,722,063	-				+1.2
2,722,063	-				+0.8
2,722,063	-				-0.1
2,722,078	+				-1.5
2,722,089	+				+0.5
2,722,089	+				-1.1
2,722,129	-				+0.4
2,722,225	+				-1.3
2,722,234	+				+0.9
2,722,291	-				-0.7
2,722,317	+				-0.2
2,722,380	-				-1.0
2,722,411	-				-2.6
2,722,539	+				+0.4
2,722,572	+				+2.5
2,722,582	+				-2.3
2,722,611	+				+0.6
2,722,611	+				-1.7
2,722,611	+				+0.4
2,722,611	+				-1.2
2,722,611	+				+0.4
2,722,711	-				+0.9
2,722,742	-				+0.6
2,722,748	-				-0.6
2,722,750	-				+1.2
2,722,766	+				-3.6
2,722,848	+				-2.1
2,722,879	+				+0.1
2,722,887	-				-0.2
2,722,887	-				+0.3
2,722,932	+				-0.3
2,722,932	+				-1.6
2,722,932	+				+0.1
2,722,932	+				-1.9
2,722,932	+				+0.9
2,722,932	+				-1.0
2,722,932	+				+0.1
2,722,940	-				-0.1
2,722,940	-				-0.6
2,722,940	-				-2.2
2,722,940	-				-1.7
2,722,940	-				+0.5
2,722,940	-				-1.7
2,722,940	-				-0.2
2,722,940	-				+1.7
2,722,940	-				-1.6
2,722,940	-				-0.2
2,722,940	-				+1.1
2,722,940	-				+0.4
2,722,940	-				+0.2
2,722,940	-				+2.1
2,723,022	+		PGA1_c26150	0.28	-2.3
2,723,022	+		PGA1_c26150	0.28	-1.7
2,723,111	+		PGA1_c26150	0.56	-0.5
2,723,177	-		PGA1_c26150	0.78	+0.3
2,723,248	+				-0.6
2,723,248	+				+0.7
2,723,256	+				+0.8
2,723,281	-				+1.0
2,723,289	-				-3.4
2,723,297	-				-0.2
2,723,330	+				+0.6