Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17340

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
1,809,831	+		PGA1_c17330	0.61	+2.0
1,809,833	+		PGA1_c17330	0.61	+0.5
1,809,839	-		PGA1_c17330	0.61	-1.6
1,809,869	+		PGA1_c17330	0.63	+3.1
1,809,910	+		PGA1_c17330	0.65	+0.8
1,809,912	-		PGA1_c17330	0.65	-0.9
1,809,927	+		PGA1_c17330	0.66	+1.2
1,809,985	+		PGA1_c17330	0.70	-0.9
1,810,002	+		PGA1_c17330	0.71	-1.2
1,810,002	+		PGA1_c17330	0.71	+0.9
1,810,002	+		PGA1_c17330	0.71	+2.5
1,810,002	+		PGA1_c17330	0.71	+1.6
1,810,002	+		PGA1_c17330	0.71	+0.1
1,810,002	+		PGA1_c17330	0.71	+0.1
1,810,002	+		PGA1_c17330	0.71	-0.6
1,810,002	+		PGA1_c17330	0.71	+0.1
1,810,002	+		PGA1_c17330	0.71	+0.5
1,810,002	+		PGA1_c17330	0.71	+0.3
1,810,002	+		PGA1_c17330	0.71	-0.3
1,810,002	+		PGA1_c17330	0.71	-0.2
1,810,002	+		PGA1_c17330	0.71	+0.2
1,810,002	+		PGA1_c17330	0.71	-0.8
1,810,002	+		PGA1_c17330	0.71	-0.6
1,810,002	+		PGA1_c17330	0.71	+2.9
1,810,002	+		PGA1_c17330	0.71	-2.8
1,810,002	+		PGA1_c17330	0.71	+0.4
1,810,002	+		PGA1_c17330	0.71	-2.0
1,810,002	+		PGA1_c17330	0.71	-2.1
1,810,002	+		PGA1_c17330	0.71	-0.4
1,810,002	+		PGA1_c17330	0.71	+1.4
1,810,002	+		PGA1_c17330	0.71	-0.5
1,810,002	+		PGA1_c17330	0.71	+0.4
1,810,002	+		PGA1_c17330	0.71	+0.3
1,810,002	+		PGA1_c17330	0.71	+0.8
1,810,002	+		PGA1_c17330	0.71	+1.4
1,810,002	+		PGA1_c17330	0.71	-0.8
1,810,002	+		PGA1_c17330	0.71	+0.3
1,810,002	+		PGA1_c17330	0.71	+0.1
1,810,002	+		PGA1_c17330	0.71	+0.2
1,810,002	+		PGA1_c17330	0.71	-1.6
1,810,010	-		PGA1_c17330	0.71	-0.7
1,810,010	-		PGA1_c17330	0.71	+1.1
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	+3.3
1,810,010	-		PGA1_c17330	0.71	-2.8
1,810,010	-		PGA1_c17330	0.71	-1.2
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	-0.3
1,810,010	-		PGA1_c17330	0.71	+0.9
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	+0.2
1,810,010	-		PGA1_c17330	0.71	-0.1
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	+0.6
1,810,010	-		PGA1_c17330	0.71	+0.9
1,810,010	-		PGA1_c17330	0.71	+0.4
1,810,010	-		PGA1_c17330	0.71	+1.1
1,810,010	-		PGA1_c17330	0.71	-1.1
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	+0.7
1,810,010	-		PGA1_c17330	0.71	+0.8
1,810,010	-		PGA1_c17330	0.71	-0.5
1,810,010	-		PGA1_c17330	0.71	+0.4
1,810,010	-		PGA1_c17330	0.71	-0.1
1,810,010	-		PGA1_c17330	0.71	+0.6
1,810,010	-		PGA1_c17330	0.71	-0.4
1,810,010	-		PGA1_c17330	0.71	-0.3
1,810,010	-		PGA1_c17330	0.71	-1.6
1,810,010	-		PGA1_c17330	0.71	+0.5
1,810,010	-		PGA1_c17330	0.71	-0.3
1,810,010	-		PGA1_c17330	0.71	-0.6
1,810,010	-		PGA1_c17330	0.71	-3.0
1,810,010	-		PGA1_c17330	0.71	+0.6
1,810,010	-		PGA1_c17330	0.71	+0.9
1,810,010	-		PGA1_c17330	0.71	-0.1
1,810,010	-		PGA1_c17330	0.71	-0.1
1,810,010	-		PGA1_c17330	0.71	-1.6
1,810,010	-		PGA1_c17330	0.71	-1.4
1,810,010	-		PGA1_c17330	0.71	+0.1
1,810,010	-		PGA1_c17330	0.71	+1.2
1,810,010	-		PGA1_c17330	0.71	-0.6
1,810,010	-		PGA1_c17330	0.71	-0.8
1,810,010	-		PGA1_c17330	0.71	-1.0
1,810,024	+		PGA1_c17330	0.72	+0.6
1,810,024	+		PGA1_c17330	0.72	-0.8
1,810,024	+		PGA1_c17330	0.72	+1.7
1,810,024	+		PGA1_c17330	0.72	+0.1
1,810,024	+		PGA1_c17330	0.72	-0.8
1,810,024	+		PGA1_c17330	0.72	+0.4
1,810,024	+		PGA1_c17330	0.72	-0.4
1,810,024	+		PGA1_c17330	0.72	+0.1
1,810,024	+		PGA1_c17330	0.72	-1.4
1,810,025	-		PGA1_c17330	0.72	-1.1
1,810,025	-		PGA1_c17330	0.72	-0.2
1,810,025	-		PGA1_c17330	0.72	-0.5
1,810,027	-		PGA1_c17330	0.72	-0.2
1,810,029	+		PGA1_c17330	0.72	-0.8
1,810,029	+		PGA1_c17330	0.72	+0.6
1,810,029	+		PGA1_c17330	0.72	-1.1
1,810,029	+		PGA1_c17330	0.72	+2.6
1,810,029	+		PGA1_c17330	0.72	+0.9
1,810,029	+		PGA1_c17330	0.72	+1.0
1,810,029	+		PGA1_c17330	0.72	+2.7
1,810,029	+		PGA1_c17330	0.72	-0.9
1,810,029	+		PGA1_c17330	0.72	-0.1
1,810,029	+		PGA1_c17330	0.72	-0.9
1,810,032	-		PGA1_c17330	0.72	+0.0
1,810,032	-		PGA1_c17330	0.72	-2.5
1,810,032	-		PGA1_c17330	0.72	-0.4
1,810,032	-		PGA1_c17330	0.72	+0.3
1,810,032	-		PGA1_c17330	0.72	+0.8
1,810,032	-		PGA1_c17330	0.72	-1.9
1,810,032	-		PGA1_c17330	0.72	+0.1
1,810,034	+		PGA1_c17330	0.72	-1.3
1,810,037	-		PGA1_c17330	0.73	+0.5
1,810,037	-		PGA1_c17330	0.73	-0.6
1,810,037	-		PGA1_c17330	0.73	+0.9
1,810,037	-		PGA1_c17330	0.73	-0.4
1,810,044	+		PGA1_c17330	0.73	+0.9
1,810,072	+		PGA1_c17330	0.75	+1.5
1,810,072	+		PGA1_c17330	0.75	+0.9
1,810,072	+		PGA1_c17330	0.75	-0.5
1,810,072	+		PGA1_c17330	0.75	-1.4
1,810,073	+		PGA1_c17330	0.75	-0.9
1,810,074	+		PGA1_c17330	0.75	-0.1
1,810,080	-		PGA1_c17330	0.75	-0.9
1,810,080	-		PGA1_c17330	0.75	+2.5
1,810,080	-		PGA1_c17330	0.75	+1.1
1,810,080	-		PGA1_c17330	0.75	+0.7
1,810,080	-		PGA1_c17330	0.75	+1.1
1,810,084	-		PGA1_c17330	0.75	+0.8
1,810,092	-		PGA1_c17330	0.76	-1.8
1,810,165	-		PGA1_c17330	0.80	+1.2
1,810,185	+		PGA1_c17330	0.81	-0.4
1,810,185	+		PGA1_c17330	0.81	+0.6
1,810,185	+		PGA1_c17330	0.81	+2.2
1,810,185	+		PGA1_c17330	0.81	+2.3
1,810,185	+		PGA1_c17330	0.81	+0.1
1,810,185	+		PGA1_c17330	0.81	+0.6
1,810,185	+		PGA1_c17330	0.81	+0.1
1,810,190	-		PGA1_c17330	0.81	-2.4
1,810,193	-		PGA1_c17330	0.81	+0.9
1,810,193	-		PGA1_c17330	0.81	-1.0
1,810,193	-		PGA1_c17330	0.81	-0.3
1,810,193	-		PGA1_c17330	0.81	-2.5
1,810,193	-		PGA1_c17330	0.81	+1.6
1,810,225	+		PGA1_c17330	0.83	+1.3
1,810,234	+		PGA1_c17330	0.84	-2.4
1,810,234	+		PGA1_c17330	0.84	+0.5
1,810,242	-		PGA1_c17330	0.84	+0.4
1,810,242	-		PGA1_c17330	0.84	-0.8
1,810,242	-		PGA1_c17330	0.84	+1.3
1,810,249	+		PGA1_c17330	0.85	+0.2
1,810,249	+		PGA1_c17330	0.85	+0.4
1,810,249	+		PGA1_c17330	0.85	+0.4
1,810,249	+		PGA1_c17330	0.85	-2.5
1,810,249	+		PGA1_c17330	0.85	-0.1
1,810,249	+		PGA1_c17330	0.85	+0.3
1,810,249	+		PGA1_c17330	0.85	+0.2
1,810,254	+		PGA1_c17330	0.85	-2.1
1,810,257	-		PGA1_c17330	0.85	+0.4
1,810,257	-		PGA1_c17330	0.85	-3.1
1,810,257	-		PGA1_c17330	0.85	+0.6
1,810,257	-		PGA1_c17330	0.85	-1.1
1,810,257	-		PGA1_c17330	0.85	-1.1
1,810,257	-		PGA1_c17330	0.85	+1.1
1,810,257	-		PGA1_c17330	0.85	-0.9
1,810,257	-		PGA1_c17330	0.85	+1.1
1,810,266	+		PGA1_c17330	0.86	+0.1
1,810,266	+		PGA1_c17330	0.86	+0.2
1,810,266	+		PGA1_c17330	0.86	+0.4
1,810,266	+		PGA1_c17330	0.86	-2.2
1,810,266	+		PGA1_c17330	0.86	+0.0
1,810,266	+		PGA1_c17330	0.86	+0.8
1,810,266	+		PGA1_c17330	0.86	-1.8
1,810,266	+		PGA1_c17330	0.86	+1.1
1,810,266	+		PGA1_c17330	0.86	-1.1
1,810,266	+		PGA1_c17330	0.86	+0.2
1,810,266	+		PGA1_c17330	0.86	-1.4
1,810,266	+		PGA1_c17330	0.86	-0.6
1,810,266	+		PGA1_c17330	0.86	-0.1
1,810,266	+		PGA1_c17330	0.86	-1.9
1,810,266	+		PGA1_c17330	0.86	-1.3
1,810,266	+		PGA1_c17330	0.86	+0.7
1,810,268	+		PGA1_c17330	0.86	+1.9
1,810,274	-		PGA1_c17330	0.86	+0.2
1,810,274	-		PGA1_c17330	0.86	+2.0
1,810,274	-		PGA1_c17330	0.86	+1.4
1,810,274	-		PGA1_c17330	0.86	+0.9
1,810,274	-		PGA1_c17330	0.86	-0.1
1,810,274	-		PGA1_c17330	0.86	-0.2
1,810,274	-		PGA1_c17330	0.86	+0.1
1,810,274	-		PGA1_c17330	0.86	-0.2
1,810,276	+		PGA1_c17330	0.86	+1.8
1,810,276	-		PGA1_c17330	0.86	-0.1
1,810,276	-		PGA1_c17330	0.86	+0.6
1,810,276	-		PGA1_c17330	0.86	-1.7
1,810,321	-		PGA1_c17330	0.89	+0.3
1,810,323	+		PGA1_c17330	0.89	+1.3
1,810,325	-		PGA1_c17330	0.89	+0.5
1,810,336	+		PGA1_c17330	0.90	-1.1
1,810,336	+		PGA1_c17330	0.90	+1.2
1,810,337	-		PGA1_c17330	0.90	+0.1
1,810,344	-				+0.1
1,810,344	-				+1.5
1,810,344	-				+0.1
1,810,348	-				+1.4
1,810,353	-				+0.3
1,810,358	+				+1.3
1,810,358	-				+0.8
1,810,366	-				-1.9
1,810,366	-				+0.6
1,810,391	+				-0.1
1,810,401	-				+0.4
1,810,412	+				-0.3
1,810,421	+				-0.8
1,810,422	+				-0.5
1,810,422	+				-1.5
1,810,422	+				+0.9
1,810,422	+				-2.5
1,810,422	+				-0.5
1,810,423	+				+0.5
1,810,423	+				-0.4
1,810,423	+				-3.7
1,810,423	+				+1.2
1,810,423	+				+0.7
1,810,428	+				+0.2
1,810,428	+				+0.2
1,810,428	+				+1.4
1,810,430	-				-0.9
1,810,430	-				+0.2
1,810,430	-				+0.3
1,810,430	-				+0.5
1,810,431	-				+0.1
1,810,441	-				-0.3
1,810,458	+				+0.2
1,810,517	-				+1.8
1,810,517	-				+0.0
1,810,524	+				+1.3
1,810,524	+				+1.3
1,810,529	+				-0.2
1,810,529	+				-2.4
1,810,529	+				+0.1
1,810,529	+				-1.2
1,810,529	+				+1.0
1,810,532	-				-2.1
1,810,532	-				-1.8
1,810,535	+				+0.0
1,810,535	+				+0.3
1,810,537	-				-0.2
1,810,537	-				-0.2
1,810,537	-				-1.4
1,810,537	-				-1.4
1,810,537	-				+0.9
1,810,539	+				+1.1
1,810,542	-				+0.5
1,810,542	-				-2.5
1,810,587	+				+1.9
1,810,595	-				+1.1
1,810,611	+				+0.2
1,810,618	+				+0.1
1,810,618	+				-0.4
1,810,618	+				-0.2
1,810,618	+				+1.2
1,810,618	+				+0.1
1,810,618	+				-1.1
1,810,618	+				+0.4
1,810,618	+				+0.4
1,810,618	+				-1.2
1,810,626	-				+1.0
1,810,626	-				-0.6
1,810,626	-				+1.2
1,810,626	-				-1.5
1,810,644	+				+1.5
1,810,644	+				-1.1
1,810,645	-				-1.4
1,810,652	-				-0.1
1,810,657	-				+0.7
1,810,657	-				-0.1
1,810,657	-				+2.1
1,810,700	+				-0.1
1,810,700	+				-0.5
1,810,703	-				-1.0
1,810,708	-				-0.5
1,810,708	-				+0.5
1,810,710	+				+1.1
1,810,711	-				+2.1
1,810,715	+				-2.2
1,810,715	+				+1.7
1,810,718	-				+0.7
1,810,720	+				-1.9
1,810,723	-				+0.6
1,810,723	-				-2.4
1,810,723	-				+0.1
1,810,723	-				+1.3
1,810,723	-				-1.9
1,810,723	-				-0.2
1,810,729	+				+1.7
1,810,736	-				+0.2
1,810,774	-				-0.8
1,810,782	+				+1.4
1,810,783	+				-1.1
1,810,813	+				+0.6
1,810,843	+				-0.6
1,810,845	+				-2.0
1,810,872	+				-0.8
1,810,872	+				-0.4
1,810,892	-				+0.0
1,810,892	-				-0.1
1,810,902	-				+0.6
1,810,910	-				+0.4
1,810,916	+				-1.3
1,810,931	-				-0.2
1,811,065	+		PGA1_c17340	0.21	+0.3
1,811,158	-		PGA1_c17340	0.29	-0.4
1,811,158	-		PGA1_c17340	0.29	-0.3
1,811,171	+		PGA1_c17340	0.30	+2.4
1,811,188	+		PGA1_c17340	0.32	-0.3
1,811,194	+		PGA1_c17340	0.32	+1.5
1,811,271	-		PGA1_c17340	0.39	+0.2
1,811,316	+		PGA1_c17340	0.43	+1.9
1,811,316	-		PGA1_c17340	0.43	+0.7
1,811,394	+		PGA1_c17340	0.49	-3.2
1,811,397	-		PGA1_c17340	0.50	-1.9
1,811,448	+		PGA1_c17340	0.54	+2.5
1,811,492	+		PGA1_c17340	0.58	-0.2
1,811,505	+		PGA1_c17340	0.59	-1.9
1,811,511	+		PGA1_c17340	0.60	-3.4
1,811,519	-		PGA1_c17340	0.60	-0.8
1,811,532	+		PGA1_c17340	0.62	+1.3
1,811,580	+		PGA1_c17340	0.66	+2.3
1,811,609	+		PGA1_c17340	0.68	+1.6
1,811,629	-		PGA1_c17340	0.70	+1.4
1,811,630	-		PGA1_c17340	0.70	-1.0
1,811,636	-		PGA1_c17340	0.71	+0.2
1,811,636	-		PGA1_c17340	0.71	-0.6
1,811,651	+		PGA1_c17340	0.72	+0.9
1,811,651	+		PGA1_c17340	0.72	+0.3
1,811,651	+		PGA1_c17340	0.72	+0.3
1,811,651	+		PGA1_c17340	0.72	-1.2
1,811,659	-		PGA1_c17340	0.73	+1.1
1,811,659	-		PGA1_c17340	0.73	+0.1
1,811,659	-		PGA1_c17340	0.73	+0.6
1,811,707	+		PGA1_c17340	0.77	+0.9
1,811,717	+		PGA1_c17340	0.78	+1.6
1,811,725	-		PGA1_c17340	0.78	-1.4
1,811,739	+		PGA1_c17340	0.80	+0.5
1,811,758	+		PGA1_c17340	0.81	+0.9
1,811,766	-		PGA1_c17340	0.82	+0.9
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1,811,899	+				+0.8
1,811,906	-				+1.3
1,811,922	-				-3.5
1,811,985	-				-2.6
1,812,033	-				-1.6
1,812,124	-		PGA1_c17350	0.14	-1.6
1,812,124	-		PGA1_c17350	0.14	+0.3
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1,812,281	-		PGA1_c17350	0.29	-0.6
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1,812,708	-		PGA1_c17350	0.70	-1.1
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