Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 100 uM Stressor (H2S)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2617 and Dsui_2618 are separated by 18 nucleotides Dsui_2618 and Dsui_2619 are separated by 40 nucleotides Dsui_2619 and Dsui_2620 are separated by 4 nucleotides Dsui_2620 and Dsui_2621 are separated by 128 nucleotides
Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168
_2617
Dsui_2618: Dsui_2618 - putative transcriptional regulator, at 2,771,187 to 2,771,405
_2618
Dsui_2619: Dsui_2619 - hypothetical protein, at 2,771,446 to 2,771,676
_2619
Dsui_2620: Dsui_2620 - hypothetical protein, at 2,771,681 to 2,773,621
_2620
Dsui_2621: Dsui_2621 - ATPase involved in chromosome partitioning, at 2,773,750 to 2,774,658
_2621
Position (kb)
2771
2772
2773
2774 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2771.592 kb on + strand, within Dsui_2619 at 2771.730 kb on + strand at 2771.730 kb on + strand at 2771.735 kb on + strand at 2771.790 kb on - strand at 2771.803 kb on + strand at 2771.906 kb on - strand, within Dsui_2620 at 2772.105 kb on - strand, within Dsui_2620 at 2772.213 kb on + strand, within Dsui_2620 at 2772.251 kb on + strand, within Dsui_2620 at 2772.341 kb on + strand, within Dsui_2620 at 2772.450 kb on - strand, within Dsui_2620 at 2772.456 kb on - strand, within Dsui_2620 at 2772.467 kb on - strand, within Dsui_2620 at 2772.542 kb on + strand, within Dsui_2620 at 2772.610 kb on - strand, within Dsui_2620 at 2772.616 kb on + strand at 2772.636 kb on + strand, within Dsui_2620 at 2772.644 kb on - strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620 at 2772.816 kb on + strand, within Dsui_2620 at 2772.819 kb on + strand, within Dsui_2620 at 2772.824 kb on - strand, within Dsui_2620 at 2772.875 kb on + strand, within Dsui_2620 at 2772.883 kb on - strand, within Dsui_2620 at 2772.940 kb on - strand, within Dsui_2620 at 2772.969 kb on - strand, within Dsui_2620 at 2773.071 kb on + strand, within Dsui_2620 at 2773.127 kb on + strand, within Dsui_2620 at 2773.159 kb on + strand, within Dsui_2620 at 2773.205 kb on - strand, within Dsui_2620 at 2773.259 kb on - strand, within Dsui_2620 at 2773.335 kb on + strand, within Dsui_2620 at 2773.410 kb on + strand, within Dsui_2620 at 2773.468 kb on + strand at 2773.499 kb on - strand at 2773.512 kb on - strand at 2773.561 kb on - strand at 2773.565 kb on - strand at 2773.565 kb on - strand at 2773.566 kb on - strand at 2773.592 kb on - strand at 2773.592 kb on - strand at 2773.619 kb on + strand at 2773.622 kb on - strand at 2773.645 kb on + strand at 2773.653 kb on - strand at 2773.694 kb on + strand at 2773.694 kb on + strand at 2773.694 kb on + strand at 2773.719 kb on - strand at 2773.763 kb on + strand at 2773.793 kb on - strand at 2773.842 kb on - strand, within Dsui_2621 at 2773.854 kb on + strand, within Dsui_2621 at 2773.989 kb on - strand, within Dsui_2621 at 2773.991 kb on + strand, within Dsui_2621 at 2774.012 kb on + strand, within Dsui_2621 at 2774.056 kb on + strand, within Dsui_2621 at 2774.081 kb on + strand, within Dsui_2621 at 2774.088 kb on + strand, within Dsui_2621 at 2774.089 kb on - strand, within Dsui_2621 at 2774.140 kb on - strand, within Dsui_2621 at 2774.145 kb on + strand, within Dsui_2621 at 2774.261 kb on - strand, within Dsui_2621 at 2774.346 kb on + strand, within Dsui_2621 at 2774.364 kb on - strand, within Dsui_2621 at 2774.380 kb on + strand, within Dsui_2621 at 2774.423 kb on + strand, within Dsui_2621 at 2774.426 kb on - strand, within Dsui_2621 at 2774.445 kb on - strand, within Dsui_2621 at 2774.500 kb on - strand, within Dsui_2621 at 2774.523 kb on - strand, within Dsui_2621 at 2774.524 kb on - strand, within Dsui_2621 at 2774.545 kb on + strand, within Dsui_2621 at 2774.545 kb on + strand, within Dsui_2621 at 2774.555 kb on - strand, within Dsui_2621 at 2774.555 kb on - strand, within Dsui_2621 at 2774.558 kb on - strand, within Dsui_2621 at 2774.561 kb on - strand, within Dsui_2621 at 2774.618 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 100 uM Stressor (H2S) remove 2,771,592 + Dsui_2619 0.63 -1.2 2,771,730 + +1.8 2,771,730 + +0.8 2,771,735 + +2.4 2,771,790 - -0.8 2,771,803 + +1.3 2,771,906 - Dsui_2620 0.12 +1.8 2,772,105 - Dsui_2620 0.22 +0.8 2,772,213 + Dsui_2620 0.27 -0.7 2,772,251 + Dsui_2620 0.29 +0.5 2,772,341 + Dsui_2620 0.34 -1.0 2,772,450 - Dsui_2620 0.40 -0.0 2,772,456 - Dsui_2620 0.40 -0.3 2,772,467 - Dsui_2620 0.40 -1.2 2,772,542 + Dsui_2620 0.44 -1.1 2,772,610 - Dsui_2620 0.48 +0.6 2,772,616 + +0.5 2,772,636 + Dsui_2620 0.49 +0.8 2,772,644 - Dsui_2620 0.50 -0.1 2,772,659 + Dsui_2620 0.50 -1.5 2,772,659 + Dsui_2620 0.50 -0.2 2,772,816 + Dsui_2620 0.58 +0.2 2,772,819 + Dsui_2620 0.59 -2.5 2,772,824 - Dsui_2620 0.59 +0.2 2,772,875 + Dsui_2620 0.62 -0.2 2,772,883 - Dsui_2620 0.62 -0.8 2,772,940 - Dsui_2620 0.65 -1.1 2,772,969 - Dsui_2620 0.66 +0.3 2,773,071 + Dsui_2620 0.72 +0.1 2,773,127 + Dsui_2620 0.74 +1.3 2,773,159 + Dsui_2620 0.76 -1.2 2,773,205 - Dsui_2620 0.79 +1.8 2,773,259 - Dsui_2620 0.81 -0.3 2,773,335 + Dsui_2620 0.85 -0.0 2,773,410 + Dsui_2620 0.89 -1.0 2,773,468 + +0.4 2,773,499 - -0.5 2,773,512 - -0.2 2,773,561 - -1.7 2,773,565 - +1.8 2,773,565 - -1.1 2,773,566 - -0.2 2,773,592 - -0.2 2,773,592 - -0.9 2,773,619 + -0.2 2,773,622 - +1.8 2,773,645 + +0.2 2,773,653 - -0.8 2,773,694 + -0.1 2,773,694 + -1.0 2,773,694 + -1.7 2,773,719 - -1.2 2,773,763 + +1.0 2,773,793 - +1.1 2,773,842 - Dsui_2621 0.10 +1.4 2,773,854 + Dsui_2621 0.11 +0.5 2,773,989 - Dsui_2621 0.26 +1.3 2,773,991 + Dsui_2621 0.27 -0.4 2,774,012 + Dsui_2621 0.29 -0.4 2,774,056 + Dsui_2621 0.34 -1.5 2,774,081 + Dsui_2621 0.36 -0.4 2,774,088 + Dsui_2621 0.37 -1.4 2,774,089 - Dsui_2621 0.37 -0.3 2,774,140 - Dsui_2621 0.43 +0.6 2,774,145 + Dsui_2621 0.43 +0.3 2,774,261 - Dsui_2621 0.56 +1.2 2,774,346 + Dsui_2621 0.66 +0.2 2,774,364 - Dsui_2621 0.68 -1.1 2,774,380 + Dsui_2621 0.69 +0.2 2,774,423 + Dsui_2621 0.74 -0.4 2,774,426 - Dsui_2621 0.74 -0.1 2,774,445 - Dsui_2621 0.76 -0.2 2,774,500 - Dsui_2621 0.83 -0.5 2,774,523 - Dsui_2621 0.85 -0.0 2,774,524 - Dsui_2621 0.85 +1.0 2,774,545 + Dsui_2621 0.87 -0.0 2,774,545 + Dsui_2621 0.87 -1.5 2,774,555 - Dsui_2621 0.89 +0.2 2,774,555 - Dsui_2621 0.89 +0.5 2,774,558 - Dsui_2621 0.89 -0.8 2,774,561 - Dsui_2621 0.89 +0.1 2,774,618 + -1.2
Or see this region's nucleotide sequence