Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 100 uM Stressor (H2S)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0312 and Dsui_0313 are separated by 45 nucleotides Dsui_0313 and Dsui_0314 are separated by 210 nucleotides Dsui_0314 and Dsui_0315 are separated by 41 nucleotides Dsui_0315 and Dsui_0316 are separated by 92 nucleotides
Dsui_0312: Dsui_0312 - endoribonuclease L-PSP, putative, at 315,226 to 315,606
_0312
Dsui_0313: Dsui_0313 - putative transcriptional regulator, at 315,652 to 316,005
_0313
Dsui_0314: Dsui_0314 - cell division protein, at 316,216 to 317,061
_0314
Dsui_0315: Dsui_0315 - Protein of unknown function (DUF2802), at 317,103 to 317,657
_0315
Dsui_0316: Dsui_0316 - hypothetical protein, at 317,750 to 318,253
_0316
Position (kb) 316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2 at 315.224 kb on - strand at 315.664 kb on + strand at 315.725 kb on - strand, within Dsui_0313 at 315.727 kb on - strand at 315.741 kb on + strand, within Dsui_0313 at 315.741 kb on + strand at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.749 kb on - strand, within Dsui_0313 at 315.756 kb on - strand, within Dsui_0313 at 315.776 kb on + strand, within Dsui_0313 at 315.851 kb on - strand, within Dsui_0313 at 315.967 kb on + strand at 315.999 kb on + strand at 316.089 kb on - strand at 316.091 kb on + strand at 316.109 kb on + strand at 316.168 kb on - strand at 316.214 kb on - strand at 316.273 kb on - strand at 316.313 kb on + strand, within Dsui_0314 at 316.327 kb on - strand, within Dsui_0314 at 316.359 kb on + strand, within Dsui_0314 at 316.411 kb on + strand at 316.459 kb on - strand, within Dsui_0314 at 316.701 kb on + strand, within Dsui_0314 at 316.951 kb on - strand, within Dsui_0314 at 316.962 kb on - strand, within Dsui_0314 at 316.973 kb on - strand, within Dsui_0314 at 317.008 kb on - strand at 317.143 kb on + strand at 317.143 kb on + strand at 317.248 kb on + strand, within Dsui_0315 at 317.248 kb on + strand, within Dsui_0315 at 317.256 kb on - strand, within Dsui_0315 at 317.256 kb on - strand, within Dsui_0315 at 317.288 kb on + strand, within Dsui_0315 at 317.339 kb on + strand, within Dsui_0315 at 317.427 kb on + strand at 317.427 kb on + strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.435 kb on - strand, within Dsui_0315 at 317.616 kb on - strand at 317.633 kb on + strand at 317.745 kb on - strand at 317.747 kb on + strand at 317.806 kb on + strand, within Dsui_0316 at 317.821 kb on - strand at 317.821 kb on - strand, within Dsui_0316 at 317.822 kb on - strand, within Dsui_0316 at 317.850 kb on + strand, within Dsui_0316 at 317.961 kb on - strand, within Dsui_0316
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 100 uM Stressor (H2S) remove 315,224 - -0.0 315,664 + -0.1 315,725 - Dsui_0313 0.21 -0.5 315,727 - -0.2 315,741 + Dsui_0313 0.25 -0.3 315,741 + +0.1 315,749 - Dsui_0313 0.27 +0.1 315,749 - Dsui_0313 0.27 -0.1 315,749 - Dsui_0313 0.27 -0.4 315,749 - Dsui_0313 0.27 -0.2 315,749 - Dsui_0313 0.27 -0.4 315,756 - Dsui_0313 0.29 -0.2 315,776 + Dsui_0313 0.35 +0.2 315,851 - Dsui_0313 0.56 +0.6 315,967 + -1.8 315,999 + -0.6 316,089 - +0.2 316,091 + +0.1 316,109 + +0.2 316,168 - -0.2 316,214 - -0.3 316,273 - -0.3 316,313 + Dsui_0314 0.11 -0.1 316,327 - Dsui_0314 0.13 -0.4 316,359 + Dsui_0314 0.17 -0.4 316,411 + -0.4 316,459 - Dsui_0314 0.29 -0.3 316,701 + Dsui_0314 0.57 -0.8 316,951 - Dsui_0314 0.87 -0.3 316,962 - Dsui_0314 0.88 -0.1 316,973 - Dsui_0314 0.89 -0.5 317,008 - -0.4 317,143 + -0.2 317,143 + +0.1 317,248 + Dsui_0315 0.26 +0.7 317,248 + Dsui_0315 0.26 +0.5 317,256 - Dsui_0315 0.28 +0.4 317,256 - Dsui_0315 0.28 -0.2 317,288 + Dsui_0315 0.33 -0.1 317,339 + Dsui_0315 0.43 +0.2 317,427 + -1.3 317,427 + Dsui_0315 0.58 +0.4 317,435 - Dsui_0315 0.60 -0.4 317,435 - Dsui_0315 0.60 +0.1 317,435 - Dsui_0315 0.60 +0.1 317,435 - Dsui_0315 0.60 +0.7 317,616 - -0.1 317,633 + +2.6 317,745 - +0.1 317,747 + +1.3 317,806 + Dsui_0316 0.11 +0.5 317,821 - -0.3 317,821 - Dsui_0316 0.14 -0.1 317,822 - Dsui_0316 0.14 +0.2 317,850 + Dsui_0316 0.20 -0.0 317,961 - Dsui_0316 0.42 -0.3
Or see this region's nucleotide sequence